Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H18
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0421 + 23331702-23331723,23332161-23332197,23333397-233335...    30   2.1  
07_03_0272 - 16143201-16144937,16145346-16145351,16145406-161455...    30   2.1  

>11_06_0421 +
           23331702-23331723,23332161-23332197,23333397-23333533,
           23333675-23334241,23335068-23335777,23335915-23336102,
           23336489-23336918
          Length = 696

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = +1

Query: 61  ASFVKLEFYFPNFIQYYCF----KSISLLGN-IVYNYYLCFILSLKYYR 192
           ASF  L F+F   +  YCF     +I L G   +Y +  C +L   Y R
Sbjct: 624 ASFCSLAFWFGRLLSIYCFPVMLSTIGLSGACAIYAFVCCLVLVFVYLR 672


>07_03_0272 -
           16143201-16144937,16145346-16145351,16145406-16145535,
           16145613-16145773,16146608-16146725,16147328-16147441,
           16149378-16149469,16149906-16149986,16150168-16150473
          Length = 914

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
 Frame = +1

Query: 370 CLQFNVKMYSLQSNPLQTYFEETLGVNPVCSMDLPQCV--CYVCAALLQKYSRFKTKCLL 543
           CL    + + +Q  P +   EE LG+   CS      +  CYV      KYS + +    
Sbjct: 107 CLTEADRKFLIQFLPTEIDAEENLGLGMCCSSSHANSLSKCYVNVISFLKYSTWSSSLCY 166

Query: 544 GQSVLYQILNSGKKV 588
           G +    +LN  K++
Sbjct: 167 GDTHPDALLNKEKQI 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,791,766
Number of Sequences: 37544
Number of extensions: 332406
Number of successful extensions: 612
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)