Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_H18
(877 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46676-1|AAY86202.1| 184|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical p... 28 7.6
Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical p... 28 7.6
Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical pr... 28 7.6
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 7.6
U97003-4|AAB52268.2| 370|Caenorhabditis elegans Hypothetical pr... 28 7.6
>U46676-1|AAY86202.1| 184|Caenorhabditis elegans Hypothetical
protein F23G4.1 protein.
Length = 184
Score = 30.7 bits (66), Expect = 1.4
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +3
Query: 450 SCLFYGFAAVCVLCMCSIIA 509
+C+ +G A C+LCMC+I++
Sbjct: 85 TCMCFGLAMQCLLCMCAIVS 104
>Z81096-8|CAD54149.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 RFKTKCLLGQSVLYQILNSGKKVTVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 690
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 361 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 418
Query: 691 PKLPIKEEIDIAIDSKTSLEN 753
P +ID + S+ N
Sbjct: 419 NSAP-----QFSIDQRRSVHN 434
>Z81096-6|CAJ80827.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 RFKTKCLLGQSVLYQILNSGKKVTVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 690
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 130 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 187
Query: 691 PKLPIKEEIDIAIDSKTSLEN 753
P +ID + S+ N
Sbjct: 188 NSAP-----QFSIDQRRSVHN 203
>Z81096-4|CAB54264.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 RFKTKCLLGQSVLYQILNSGKKVTVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 690
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 128 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 185
Query: 691 PKLPIKEEIDIAIDSKTSLEN 753
P +ID + S+ N
Sbjct: 186 NSAP-----QFSIDQRRSVHN 201
>Z81096-3|CAB54265.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 RFKTKCLLGQSVLYQILNSGKKVTVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 690
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 186 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 243
Query: 691 PKLPIKEEIDIAIDSKTSLEN 753
P +ID + S+ N
Sbjct: 244 NSAP-----QFSIDQRRSVHN 259
>Z78065-11|CAD54155.2| 922|Caenorhabditis elegans Hypothetical
protein T09E8.1c protein.
Length = 922
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 RFKTKCLLGQSVLYQILNSGKKVTVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 690
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 361 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 418
Query: 691 PKLPIKEEIDIAIDSKTSLEN 753
P +ID + S+ N
Sbjct: 419 NSAP-----QFSIDQRRSVHN 434
>Z78065-10|CAJ80826.1| 691|Caenorhabditis elegans Hypothetical
protein T09E8.1f protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 RFKTKCLLGQSVLYQILNSGKKVTVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 690
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 130 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 187
Query: 691 PKLPIKEEIDIAIDSKTSLEN 753
P +ID + S+ N
Sbjct: 188 NSAP-----QFSIDQRRSVHN 203
>Z78065-7|CAB54297.2| 689|Caenorhabditis elegans Hypothetical
protein T09E8.1b protein.
Length = 689
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 RFKTKCLLGQSVLYQILNSGKKVTVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 690
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 128 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 185
Query: 691 PKLPIKEEIDIAIDSKTSLEN 753
P +ID + S+ N
Sbjct: 186 NSAP-----QFSIDQRRSVHN 201
>Z78065-6|CAB54298.2| 747|Caenorhabditis elegans Hypothetical
protein T09E8.1a protein.
Length = 747
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 RFKTKCLLGQSVLYQILNSGKKVTVTSVQELDRSNLKIPFAVY---TETDVKTIHTVCDD 690
R + L G S LYQ+ N G V S + S+L I V+ + V +++ +CD
Sbjct: 186 RRSLQALNGSSALYQLNNGGSPNGVRS--QFSPSDLSIHTPVHHVGSRVRVSSVNQICDS 243
Query: 691 PKLPIKEEIDIAIDSKTSLEN 753
P +ID + S+ N
Sbjct: 244 NSAP-----QFSIDQRRSVHN 259
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +1
Query: 508 QKYSRFKTKCLLGQSVLYQILNSGKKVTVTSVQELDRSNLKIPFAVYTETDVKTIHTVCD 687
Q+Y ++ KC + + ++++S V V+EL R I +A Y VK T D
Sbjct: 1762 QEYEEYRKKCKKTTTKVTKVIDSCDDV---KVEELSR----IEYAKYKSRCVKET-TPSD 1813
Query: 688 DPKLPIKEEIDIAIDSKTSLEND 756
P I++ ID +I ++ + +
Sbjct: 1814 TPPTKIRKRIDCSIVDESMMSEE 1836
>U97003-4|AAB52268.2| 370|Caenorhabditis elegans Hypothetical
protein F47C10.3 protein.
Length = 370
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -3
Query: 539 KHLVLNLLYFCNNAAH 492
+H++LNL+ FCN+A H
Sbjct: 274 EHMLLNLILFCNSALH 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,801,519
Number of Sequences: 27780
Number of extensions: 353996
Number of successful extensions: 940
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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