Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H18
         (877 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    28   0.098
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    28   0.098
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.8  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   6.5  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   6.5  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   6.5  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   6.5  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   6.5  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 0.098
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 464 IEQTGLTPNVSSK*VCNGLDCRLYILTLNCKHIRHTDSLSMFDEFI 327
           +EQ G   N  S  +CN  + +L+ L    KHI H  SL + D+ +
Sbjct: 221 MEQQGNYENAVSH-ICNATNKQLFQLVAWAKHIPHFTSLPLEDQVL 265


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 28.3 bits (60), Expect = 0.098
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 464 IEQTGLTPNVSSK*VCNGLDCRLYILTLNCKHIRHTDSLSMFDEFI 327
           +EQ G   N  S  +CN  + +L+ L    KHI H  SL + D+ +
Sbjct: 221 MEQQGNYENAVSH-ICNATNKQLFQLVAWAKHIPHFTSLPLEDQVL 265


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 650 VYTANGIFKLLRSSSWTDVTVT 585
           V+  NG+  L   S + D+TVT
Sbjct: 392 VFAENGVSALAGKSEYVDITVT 413


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 49  HGNSASFVKLEFYFPNFIQ 105
           H N+ ++ KL++Y  N+I+
Sbjct: 91  HNNNNNYKKLQYYNINYIE 109


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 49  HGNSASFVKLEFYFPNFIQ 105
           H N+ ++ KL++Y  N+I+
Sbjct: 91  HNNNNNYKKLQYYNINYIE 109


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 49  HGNSASFVKLEFYFPNFIQ 105
           H N+ ++ KL++Y  N+I+
Sbjct: 91  HNNNNNYKKLQYYNINYIE 109


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 49  HGNSASFVKLEFYFPNFIQ 105
           H N+ ++ KL++Y  N+I+
Sbjct: 91  HNNNNNYKKLQYYNINYIE 109


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 49  HGNSASFVKLEFYFPNFIQ 105
           H N+ ++ KL++Y  N+I+
Sbjct: 324 HNNNNNYKKLQYYNINYIE 342


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,374
Number of Sequences: 438
Number of extensions: 4092
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)