Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_H15
(897 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 60 3e-10
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 56 5e-09
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 55 2e-08
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 52 8e-08
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 51 2e-07
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 49 8e-07
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 46 7e-06
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 46 7e-06
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 42 9e-05
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 41 2e-04
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 40 4e-04
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 36 0.008
SPBC2F12.11c |rep2||transcriptional activator Rep2|Schizosacchar... 30 0.51
SPAC24H6.02c |||TIM23 translocase complex subunit Tim15|Schizosa... 29 0.68
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 28 2.1
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 27 3.6
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 3.6
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 27 4.8
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 26 6.3
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 6.3
SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr 3|... 26 6.3
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 60.5 bits (140), Expect = 3e-10
Identities = 32/94 (34%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +3
Query: 492 PNWIVLVSDVARLSSMTNLLHHLRHRPQVLRLVQPTRPXDKLFTCKVCSRSFGYKHVLQN 671
PN + + + + ++ R +P + P P K F C CS+ F L+
Sbjct: 381 PNSMEATEQIGTIGTDGSMKRRKRRQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRR 440
Query: 672 HERT-HTGEKPFECSECHKRFTRDHHLKTHLRLH 770
H R+ HT EKPF C C KRF+R +L+ H RLH
Sbjct: 441 HIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLH 473
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 690 GEKPFECSECHKRFTRDHHLKTHLR-LHT 773
G K F C EC K+F R HL+ H+R LHT
Sbjct: 419 GGKSFVCPECSKKFKRSEHLRRHIRSLHT 447
Score = 32.3 bits (70), Expect = 0.096
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 769 TPGEKPYSCPHCPRSFXSRVANLRRHLR 852
+PG K + CP C + F R +LRRH+R
Sbjct: 417 SPGGKSFVCPECSKKF-KRSEHLRRHIR 443
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 582 RLVQPTRPXDKLFTCKVCSRSFGYKHVLQNHERTHTGEKP 701
R ++ +K F C +C + F + L+ HER H P
Sbjct: 440 RHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHERLHVNASP 478
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 56.4 bits (130), Expect = 5e-09
Identities = 27/55 (49%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +3
Query: 612 KLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECS--ECHKRFTRDHHLKTHLRLH 770
K + C C R F + H R+HTGEKPFECS C KRFTR L H+R H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 696 KPFECSECHKRFTRDHHLKTHLRLHTG 776
K +EC C + F R H H+R HTG
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTG 28
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 781 KPYSCPHCPRSFXSRVANLRRHLRVXTGKE 870
K Y CP C R F R + RH+R TG++
Sbjct: 2 KSYECPFCKRVF-HRQEHQVRHIRSHTGEK 30
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +3
Query: 633 CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTG*EALQLPT 800
C++ F + L++H THT +PF+CS C K F R H + H +LHTG +A T
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVT 632
Score = 54.8 bits (126), Expect = 2e-08
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +3
Query: 618 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLHTG*EALQLP 797
F C +C +SF +H + HE+ HTG K F C C++RF R L H + G L+
Sbjct: 600 FQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKSEVGQNCLRTA 659
Query: 798 T 800
T
Sbjct: 660 T 660
Score = 35.5 bits (78), Expect = 0.010
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 588 VQPTRPXDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRL 767
V+ TRP + V ++S E G + C+KRFTR ++LK+H+
Sbjct: 534 VRNTRPRSRSLNSLVGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHMNT 593
Query: 768 HT 773
HT
Sbjct: 594 HT 595
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 52.4 bits (120), Expect = 8e-08
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 600 RPXDKLFTC--KVCSRSFGYKHVLQNHERTHTGEKPFEC--SECHKRFTRDHHLKTHLRL 767
R K+F C + C + + +L+ H RTH+ E+PF C + C K F R HLK H R
Sbjct: 17 RSAKKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRC 76
Query: 768 HT 773
HT
Sbjct: 77 HT 78
Score = 48.4 bits (110), Expect = 1e-06
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +3
Query: 567 RPQVLRLVQPTRPXDKLFTCKV--CSRSFGYKHVLQNHERTHTGEKPFEC--SECHKRFT 734
RP +L T ++ F C CS++F K L+ H+R HT KPF C C +F
Sbjct: 36 RPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFY 95
Query: 735 RDHHLKTHLRLH 770
HL+ H+ +H
Sbjct: 96 TQQHLERHIEVH 107
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +3
Query: 555 HLRHRPQVLRLVQPTRPXDKLFTCKV--CSRSFGYKHVLQNHERT-HTGEKPFECSECHK 725
HLRH + L Q T K + C + C +SF L+ H H G F C C
Sbjct: 218 HLRHH---VVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGT 274
Query: 726 RFTRDHHLKTHLRLHT 773
+F H L+ HL T
Sbjct: 275 KFGYKHMLQRHLERGT 290
Score = 33.5 bits (73), Expect = 0.042
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +3
Query: 618 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLK 752
F C C FGYKH+LQ H T C + HK + + +K
Sbjct: 267 FHCDSCGTKFGYKHMLQRHLERGT------CKKAHKPYINECGIK 305
Score = 26.6 bits (56), Expect = 4.8
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Frame = +3
Query: 459 LRRHLRPCFHH--PNWIVLVSDVARLSSMTNLLHHLRHRPQVLRLVQPTRPXDKLFTCKV 632
LR H+ C H P R ++ L +H+ + +++ + P + +C V
Sbjct: 130 LRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHE--KIISYSCPHE---SC-V 183
Query: 633 CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLH 770
F LQNH R P CS C ++F HL+ H+ LH
Sbjct: 184 GHEGFEKWSQLQNHIRE--AHVP-SCSICGRQFKTAAHLRHHVVLH 226
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 51.2 bits (117), Expect = 2e-07
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +3
Query: 618 FTCKVCSRSFGYKHVLQNHERTHTGEKPFECS--ECHKRFTRDHHLKTHLRLHT 773
+ C +C+++F H RTHTGEKP C+ C KRF+R L H R+HT
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARIHT 79
Score = 32.7 bits (71), Expect = 0.073
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 696 KPFECSECHKRFTRDHHLKTHLRLHTG 776
+P++C C K F R H H+R HTG
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIRTHTG 50
Score = 32.3 bits (70), Expect = 0.096
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 781 KPYSCPHCPRSFXSRVANLRRHLRVXTG-KETIC 879
+PY CP C ++F R+ + RH+R TG K +C
Sbjct: 24 RPYKCPLCTKAFY-RLEHQTRHIRTHTGEKPHVC 56
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 49.2 bits (112), Expect = 8e-07
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 633 CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLRLH 770
C++ K+ +++H +TH ++P+ C C F R H LK HLR+H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
Score = 41.5 bits (93), Expect = 2e-04
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = +3
Query: 597 TRPXDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTH 758
T D+ + C +C F H L+ H R H +P+ C EC KRF R L H
Sbjct: 466 THLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVC-ECLKRFNRLDALNRH 518
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 46.0 bits (104), Expect = 7e-06
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 600 RPXDKLFTCKV--CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHLR 764
R D F C C +SF K L+ HERTH K F CS C++ F R L H++
Sbjct: 20 RLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQ 76
Score = 32.3 bits (70), Expect = 0.096
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +3
Query: 663 LQNHERTHT-GEKPFECS--ECHKRFTRDHHLKTHLRLH 770
L+ R H G+ F C+ +C K FTR HL+ H R H
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTH 50
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 567 RPQVLRLVQPTRPXDKLFTCKVCSRSFGYKHVLQNH 674
R + LR + T K F+C C+R+F VL H
Sbjct: 39 RKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 46.0 bits (104), Expect = 7e-06
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Frame = +3
Query: 594 PTRPXDKL--FTCKVCSRSFGYKHVLQNHERTHTGEKPFECSE-------CHKRFTRDHH 746
P P K+ + C+ C+R+F L+ H R+HT EKPF CSE C ++F+R
Sbjct: 60 PNAPPQKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDL 119
Query: 747 LKTH 758
L H
Sbjct: 120 LLRH 123
Score = 32.3 bits (70), Expect = 0.096
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 696 KPFECSECHKRFTRDHHLKTHLRLHT 773
K + C C + F R HLK H+R HT
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSHT 93
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 42.3 bits (95), Expect = 9e-05
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 654 KHVLQNHERTHTGEKPFECS--ECHKRFTRDHHLKTHLR 764
+ L H R+HTGEKPF CS EC + FTR L H+R
Sbjct: 90 RFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMR 128
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 41.1 bits (92), Expect = 2e-04
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 618 FTCKVCSRSFGYKHVLQNHERTHTGEKPFEC--SECHKRFTRDHHLKTHLRLH 770
+ C C + F L+ H +HTGE+PF C + C K F +++ H R+H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
Score = 31.1 bits (67), Expect = 0.22
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Frame = +1
Query: 655 NTFCKTTNGHTREKSRSNAANVTKDLLVII--------ILRHIYVCTPGEKPYSCPH--C 804
+T K HT S S+AANV + + H Y T GE+P+ C + C
Sbjct: 445 STSRKIAQSHTGSSSTSSAANVRYRCTECLQGFSRPSSLKIHTYSHT-GERPFVCDYAGC 503
Query: 805 PRSFXSRVANLRRHLRV 855
++F R +N+RRH R+
Sbjct: 504 GKAFNVR-SNMRRHQRI 519
Score = 29.1 bits (62), Expect = 0.90
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 702 FECSECHKRFTRDHHLKTHLRLHTG 776
+ C+EC + F+R LK H HTG
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTG 492
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 40.3 bits (90), Expect = 4e-04
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 633 CSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTHL 761
C++SF K + H R+HT K F C C FTR L H+
Sbjct: 24 CTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHV 66
Score = 29.5 bits (63), Expect = 0.68
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +3
Query: 690 GEKPFECS--ECHKRFTRDHHLKTHLRLHTG*EALQLP 797
G+ ++C C K FTR H + H R HT +A P
Sbjct: 13 GDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICP 50
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +3
Query: 582 RLVQPTRPXDK-LFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLKTH 758
+L +P+ K +F C C++ F L H+ H+ +P C C + R LK H
Sbjct: 18 KLTEPSLIDSKRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRH 77
Query: 759 L-RLH 770
+ R H
Sbjct: 78 IQRFH 82
Score = 32.3 bits (70), Expect = 0.096
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 693 EKPFECSECHKRFTRDHHLKTHLRLHTG*EALQLP 797
++ F C +C KRFTR +L H H+ E + P
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCP 62
>SPBC2F12.11c |rep2||transcriptional activator
Rep2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 219
Score = 29.9 bits (64), Expect = 0.51
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 561 RHRPQVLRLVQPTRPXDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSE 716
R R + R+ + RP L C C+ +F + L HE T + PF+ S+
Sbjct: 157 RMRRREGRVQKALRPTPNLI-CSKCNTTFNHSTALMMHEATCLNQVPFKLSD 207
>SPAC24H6.02c |||TIM23 translocase complex subunit
Tim15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 29.5 bits (63), Expect = 0.68
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +3
Query: 588 VQPTRPXDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSECHKRFTRDHHLK 752
+QP + FTC VC+ + Q + H G +C +C R HLK
Sbjct: 70 LQPKPTYNVSFTCTVCNTRSNHNFSKQAY---HNGTVLVQCPKCKNRHLMADHLK 121
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 603 PXDKLFTCKVCSRSFGYKHVLQNHERTHTGEKPFECSEC 719
P D C +C R F Y V N+E + K F C C
Sbjct: 1363 PRDSFIDCTICERRFHYDCVGLNNEIADSVSK-FTCPIC 1400
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 42 ILSCLS*VTTRALASLATLIHPFNSATTQHVNNLI*NFHENCN 170
I CL ++ L + L HPF S +NL+ N EN N
Sbjct: 268 IKKCLENDPSKRLTAADALKHPFLSEKRPATSNLLPNVRENFN 310
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 297 SRRRIQEVYQYDLFLQCVKNLFRCWRRDCLQAALP 401
+ RR+Q Q ++ L CV+ F+ +++D L LP
Sbjct: 2094 TERRLQSCSQIEVTLPCVECFFK-YKKDALHTLLP 2127
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Frame = -2
Query: 437 PSIARPVDLLPERQR-----GLQAVSPPASEEILDAL*KEVVLIHLLNSASTAATRPSH 276
P+ A+P++L + R GL ++SP + EEI+D + K + + + AA+ SH
Sbjct: 207 PNQAKPLNLREDADRRITVPGLTSLSPESLEEIIDIIMKGNANRTMSPTEANAASSRSH 265
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +3
Query: 624 CKVCSRSFGYKHVLQNHERTHTGEK 698
C VC+++F ++ L+NHE + +K
Sbjct: 272 CMVCNKNFRSQNQLENHENSKKHKK 296
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +3
Query: 672 HERTHTGEKPFECSECHKRFTRDHHLKTHLRLHT 773
H+ KP+ C C KR+ + LK H R H+
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYH-RTHS 421
>SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr
3|||Manual
Length = 565
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 673 TNGHTREKSRSNAANVTKDLLVIIILRHIYVCTPGEKPY 789
T+G + +K+R N + D +++ RH + T G+KP+
Sbjct: 322 TDGLSLDKARGNLFMI--DRCGLLLERHAKIATDGQKPF 358
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,222,897
Number of Sequences: 5004
Number of extensions: 62756
Number of successful extensions: 226
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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