Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H13
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0016 + 12350435-12350537,12351517-12351583,12351981-123520...    31   1.6  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  
05_06_0135 + 25921970-25922190,25922662-25922692,25924979-25925578     28   8.7  

>12_02_0016 +
           12350435-12350537,12351517-12351583,12351981-12352047,
           12352301-12352381,12352416-12352445,12352625-12352665,
           12353083-12353212,12354096-12354327,12355244-12355332
          Length = 279

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +2

Query: 656 VAKPDRTIKIPGVSPWKLPRCALLFRPCRLPDTXSAFLPSGKXGAFSXLTLLGISVR 826
           VA P R I I  V+P   PR  L    C L      FLP     +F+ + + G+  R
Sbjct: 10  VAPPARPIPIAAVAPLARPRQRLPAVACLLMTWEPIFLPETLYYSFARIDIFGLHTR 66


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 421 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 576
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 370 NESAN---ARGEAVCVLGALPLPRSLTRCAR 453
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>05_06_0135 + 25921970-25922190,25922662-25922692,25924979-25925578
          Length = 283

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 690 AFPPGSSLXALSCSDPAAYRIPXPPFSLREXVALSHXSRC 809
           A P G  + + S  D   +R P P F ++  ++L++  RC
Sbjct: 54  AIPLGDGIPSPSIPDIKTWRRPLPTFYIKNKLSLANVCRC 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,391,515
Number of Sequences: 37544
Number of extensions: 462278
Number of successful extensions: 1147
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)