Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H13
         (886 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    32   3.2  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    32   3.2  
X04947-1|CAA28610.1|  135|Homo sapiens protein ( Human mRNA for ...    30   9.7  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 29/105 (27%), Positives = 42/105 (40%)
 Frame = -2

Query: 876 RGGXXXQPXLGGEPTYTRTEIPNSVXYEKAPXFPEGRKAXQVSGKRQGRNRRAXRGSFQG 697
           RGG   +  L G     RT  P+S   +K     E R      G +Q  +     G    
Sbjct: 539 RGGPPKKEELVGGKKKGRTWGPSSTL-QKERVGGEERLKGLGEGSKQWSSSAPNLGKSPK 597

Query: 696 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 562
            TP    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 598 HTP----IAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 29/105 (27%), Positives = 42/105 (40%)
 Frame = -2

Query: 876 RGGXXXQPXLGGEPTYTRTEIPNSVXYEKAPXFPEGRKAXQVSGKRQGRNRRAXRGSFQG 697
           RGG   +  L G     RT  P+S   +K     E R      G +Q  +     G    
Sbjct: 540 RGGPPKKEELVGGKKKGRTWGPSSTL-QKERVGGEERLKGLGEGSKQWSSSAPNLGKSPK 598

Query: 696 ETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 562
            TP    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 599 HTP----IAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639


>X04947-1|CAA28610.1|  135|Homo sapiens protein ( Human mRNA for
           T-cell receptor alpha-chain HAV01 V(a)6.1/J(a)U. ).
          Length = 135

 Score = 30.3 bits (65), Expect = 9.7
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
 Frame = -2

Query: 834 TYTRTEIPNSVXYEKAPXFPEGRKAXQVSGK--RQGRNRRAXRGSFQGETPGIFIVLSGF 661
           TY  ++    + + K P    G+    +SG    Q  NRR+   +FQ       +V+S  
Sbjct: 44  TYDTSDQSYGLFWYKQPS--SGKYFSYLSGSYDEQNANRRSLLINFQKARKSANLVISAS 101

Query: 660 ATSDLSVDFCDARQGGG 610
              D ++ FC +R+G G
Sbjct: 102 QLGDSAMYFCASREGSG 118


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,993,316
Number of Sequences: 237096
Number of extensions: 2490042
Number of successful extensions: 6159
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6159
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)