Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H08
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0419 - 17783202-17784938                                         38   0.010
04_03_0454 - 16071490-16071534,16071849-16071980,16072523-160727...    31   1.6  
04_03_0461 - 16165126-16165419,16165947-16166195,16168510-161686...    29   3.6  
10_08_0537 - 18625440-18626804                                         29   6.3  
08_01_0918 + 9043949-9045625                                           29   6.3  
05_01_0242 + 1804183-1806096                                           28   8.4  

>10_08_0419 - 17783202-17784938
          Length = 578

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +1

Query: 667 LLHALCCIGEWEKALKVLDEIN-LSSVPSHSAYSTXI 774
           L+ ALCC GE  KA+K+LDE++ +   P+H  Y+T I
Sbjct: 445 LIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTII 481


>04_03_0454 -
           16071490-16071534,16071849-16071980,16072523-16072771,
           16075090-16075225,16077833-16078051,16079320-16079698,
           16080238-16080478
          Length = 466

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 275 SAVKEPAPIKCVSSQIAYLESELAKSSFNWNELKKNILFERGNINEKNFEGVLLKFMVQR 454
           S +    P+ CV++ +   ++ + K SF    ++ + +     I    F   +  F   R
Sbjct: 355 STLSSTVPLLCVTAAVGQGDA-VTKESFELTTVRSSAVIACAKI--MRFMNDIAAFKSGR 411

Query: 455 K-KFDAANSFVCYINK 499
           K K DAAN+  CYIN+
Sbjct: 412 KNKGDAANTVECYINE 427


>04_03_0461 -
           16165126-16165419,16165947-16166195,16168510-16168645,
           16171251-16171469,16172738-16173116,16173660-16173918,
           16176052-16176315
          Length = 599

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 275 SAVKEPAPIKCVSSQIAYLESELAKSSFNWNELKKNILFERGNINEKNFEGVLLKFMVQR 454
           S +    P+ CV++ +   ++ + K SF    ++ + +     I    F   +  F   R
Sbjct: 449 STLSSTVPLLCVTAAVGQGDA-VTKESFELTTVRSSAVIACAKI--MRFMNDIAAFKSGR 505

Query: 455 K-KFDAANSFVCYINK 499
           K K DAAN+  CY+N+
Sbjct: 506 KNKGDAANTVECYMNE 521


>10_08_0537 - 18625440-18626804
          Length = 454

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 667 LLHALCCIGEWEKALKVLDEI 729
           L+HALC   +WEKA +++ EI
Sbjct: 258 LIHALCTYDKWEKAEELIFEI 278


>08_01_0918 + 9043949-9045625
          Length = 558

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 667 LLHALCCIGEWEKALKVLDE-INLSSVPSHSAYSTXI 774
           L+H LC   +WEKA +++ E IN    P   ++++ I
Sbjct: 457 LIHGLCTSDKWEKAEELISEMINRGICPDTISFNSII 493


>05_01_0242 + 1804183-1806096
          Length = 637

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 667 LLHALCCIGEWEKALKVLDEINLSS-VPSHSAYSTXI 774
           L+  LCCIG+ + AL   + +  ++ +P+ + YST +
Sbjct: 333 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLV 369


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,489,324
Number of Sequences: 37544
Number of extensions: 262403
Number of successful extensions: 693
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)