Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H08
         (863 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         26   1.3  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     26   1.3  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     26   1.3  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     26   1.3  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   3.0  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       25   3.0  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       24   6.9  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       24   6.9  

>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 350 SSFNWNELKKNILFERGNINEKNFEGVL 433
           +S +W+   KN+++ R NINE  F  VL
Sbjct: 117 NSADWDTYYKNMIWARDNINEGMFIYVL 144


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 350 SSFNWNELKKNILFERGNINEKNFEGVL 433
           +S +W+   KN+++ R NINE  F  VL
Sbjct: 117 NSADWDTYYKNMIWARDNINEGMFIYVL 144


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 350 SSFNWNELKKNILFERGNINEKNFEGVL 433
           +S +W+   KN+++ R NINE  F  VL
Sbjct: 117 NSADWDTYYKNMIWARDNINEGMFIYVL 144


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +2

Query: 350 SSFNWNELKKNILFERGNINEKNFEGVL 433
           +S +W+   KN+++ R NINE  F  VL
Sbjct: 117 NSADWDTYYKNMIWARDNINEGMFIYVL 144


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 543 MLYYEMSKENKLIDEGKTFILKTYRDLYKKYKVLDYTT 656
           +++    K +KL  +GK  I   Y D +K ++ +D T+
Sbjct: 248 IVHVPAEKRSKLDPKGKKLIFVGYADNHKAFRFVDPTS 285


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +3

Query: 543 MLYYEMSKENKLIDEGKTFILKTYRDLYKKYKVLDYTT 656
           +++    K +KL  +GK  I   Y D +K ++ +D T+
Sbjct: 18  IVHVPAEKRSKLDPKGKKLIFVGYADNHKAFRFVDPTS 55


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +3

Query: 543 MLYYEMSKENKLIDEGKTFILKTYRDLYKKYKVLDYTT 656
           +++    K +KL  +GK  +   Y D +K ++ +D T+
Sbjct: 18  IVHVPAEKRSKLDPKGKKLMFVGYADNHKAFRFVDPTS 55


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = +3

Query: 543 MLYYEMSKENKLIDEGKTFILKTYRDLYKKYKVLDYTT 656
           +++    K +KL  +GK  +   Y D +K ++ +D T+
Sbjct: 18  IVHVPAEKRSKLDPKGKKLMFVGYADNHKAFRFVDPTS 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,437
Number of Sequences: 2352
Number of extensions: 13727
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)