Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_H08
(863 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 4.3
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 4.3
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF047665-1|AAP13766.1| 499|Caenorhabditis elegans Hypothetical ... 29 4.3
AF067613-12|AAN73861.1| 467|Caenorhabditis elegans Hypothetical... 29 5.7
AC024785-4|AAF60602.3| 466|Caenorhabditis elegans C-type lectin... 29 5.7
Z68012-3|CAA92017.1| 269|Caenorhabditis elegans Hypothetical pr... 28 7.5
U12965-5|AAA20612.2| 346|Caenorhabditis elegans Serpentine rece... 28 7.5
>Z83220-4|CAC42264.1| 617|Caenorhabditis elegans Hypothetical
protein C34B7.4 protein.
Length = 617
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 236 HFGFGRTCRFVYKSAVKEP 292
HFG G+ C+ +Y SA +EP
Sbjct: 338 HFGTGKACKAIYSSAYEEP 356
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 484 NKRVCSIKLFSLYHKLQENSFKIFLINVSS-FKE 386
NK+ C+ + ++ H +QE +F+ LI +SS F+E
Sbjct: 928 NKKPCNHQQYASIHHIQEGAFRAALIKMSSMFRE 961
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 484 NKRVCSIKLFSLYHKLQENSFKIFLINVSS-FKE 386
NK+ C+ + ++ H +QE +F+ LI +SS F+E
Sbjct: 928 NKKPCNHQQYASIHHIQEGAFRAALIKMSSMFRE 961
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 484 NKRVCSIKLFSLYHKLQENSFKIFLINVSS-FKE 386
NK+ C+ + ++ H +QE +F+ LI +SS F+E
Sbjct: 928 NKKPCNHQQYASIHHIQEGAFRAALIKMSSMFRE 961
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -2
Query: 484 NKRVCSIKLFSLYHKLQENSFKIFLINVSS-FKE 386
NK+ C+ + ++ H +QE +F+ LI +SS F+E
Sbjct: 928 NKKPCNHQQYASIHHIQEGAFRAALIKMSSMFRE 961
>AF047665-1|AAP13766.1| 499|Caenorhabditis elegans Hypothetical
protein T23E1.2 protein.
Length = 499
Score = 29.1 bits (62), Expect = 4.3
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Frame = +2
Query: 326 YLESELAKSSFNWNELKKNILFERGNINEKNF--EGVLLKF---MVQRKKFDAANSFVCY 490
Y S + S +W ++ +L E ++KN L ++ +V R FD +N+ +
Sbjct: 294 YGYSPMIFSEEDWENVEGKLLKEMSTTHQKNLIVRKELQRYRELLVNRPLFDESNTPGMW 353
Query: 491 INKKNEELSLXCNKW 535
N EELS KW
Sbjct: 354 WNDLQEELSFMYKKW 368
>AF067613-12|AAN73861.1| 467|Caenorhabditis elegans Hypothetical
protein F56D6.2 protein.
Length = 467
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 407 NEKNFEGVLLKFMVQRKKFDAANSFVCYINKKNEE-LSLXCNKWTSNAL 550
N+K G KF+VQ+ ++ A ++ Y N L++ NK T+N L
Sbjct: 23 NDKEIRGFCFKFVVQKMAYNDARNWCHYQNPVGPSYLAVVGNKETNNNL 71
>AC024785-4|AAF60602.3| 466|Caenorhabditis elegans C-type lectin
protein 72 protein.
Length = 466
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 407 NEKNFEGVLLKFMVQRKKFDAANSFVCYINKKNEE-LSLXCNKWTSNAL 550
N+K G KF+VQ+ ++ A ++ Y N L++ NK T+N L
Sbjct: 23 NDKEIRGFCFKFVVQKMTYNDARNWCHYQNPVGPSYLAVVGNKETNNNL 71
>Z68012-3|CAA92017.1| 269|Caenorhabditis elegans Hypothetical
protein T24D5.3 protein.
Length = 269
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 338 ELAK--SSFNW-NELKKNILFERGNINEKNFEGVLLKFMVQRKK 460
ELAK S NW EL + LFE NI +KN E +L K Q+KK
Sbjct: 12 ELAKRRKSNNWLYELDE--LFEIENIQKKNAEYMLFKSSPQKKK 53
>U12965-5|AAA20612.2| 346|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 11 protein.
Length = 346
Score = 28.3 bits (60), Expect = 7.5
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 474 FAASNFFLCTINFRRTPSKFFSLMFPLSKSMFFFNSFQLNELFASSDSKYAI*LLTHL 301
F ASN++ I+F + L+F LSKS F N L +F S +THL
Sbjct: 20 FQASNYYQMIISFCSVFPLIYFLLFKLSKSSFHGN---LKTIFISYFVSLVAFSMTHL 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,100,319
Number of Sequences: 27780
Number of extensions: 292145
Number of successful extensions: 717
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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