Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H08
         (863 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              25   1.2  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   4.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   8.4  

>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 329 LESELAKSSFNWNELKKNILFERGNINEKNFEGVL 433
           +E E  +S       K N++ E GN NEKN   ++
Sbjct: 54  VEDENVQSYVECMMKKFNVVDENGNFNEKNTRDIV 88


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 420 KFFSLMFPLSKSMFFFNSFQLNELFAS 340
           KF ++ FP  K   FF S  + +L A+
Sbjct: 239 KFVNIFFPGGKKTTFFESCGVADLIAT 265


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 284 KEPAPIKCVSSQIAYLESELAKS 352
           + P  + C      YLESELAK+
Sbjct: 340 EHPCVMDCKVGVRTYLESELAKA 362


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 284 KEPAPIKCVSSQIAYLESELAKS 352
           + P  + C      YLESELAK+
Sbjct: 255 EHPCVMDCKVGVRTYLESELAKA 277


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 284 KEPAPIKCVSSQIAYLESELAKS 352
           + P  + C      YLESELAK+
Sbjct: 574 EHPCVMDCKVGVRTYLESELAKA 596


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 685 CIGEWEKALKVLDEINLSSVPSHSAY 762
           CIG ++  L+  + +     P H+A+
Sbjct: 181 CIGAFDVTLESGERVTFLDTPGHAAF 206


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,576
Number of Sequences: 438
Number of extensions: 3703
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)