Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H07
         (883 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0216 - 14954047-14956098                                         30   2.8  
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258     29   3.7  
06_03_0785 - 24563310-24565004,24565302-24565384,24565484-245660...    28   8.6  
02_05_0167 - 26415319-26415494,26415591-26415840,26415909-264159...    28   8.6  

>11_04_0216 - 14954047-14956098
          Length = 683

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = +3

Query: 117 EQKLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQS---VGSGGS 287
           E +L+ES           A QE PRE+     LRP +++ R+  +  SS+    VG G  
Sbjct: 480 EMRLQESHDDQEEEFKDAADQESPRED----PLRPSTSIARRVHSRTSSEHLLVVGEGSP 535

Query: 288 AKRK 299
            K K
Sbjct: 536 RKEK 539


>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
          Length = 874

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +3

Query: 147 PPASSSSIAAQEKPREELPTRALRPRSTLTRKTTN 251
           PP+SSSS  A+     E P R+ RP +  T  TT+
Sbjct: 680 PPSSSSSSPARSSGSTEQPHRSKRPWAETTTTTTS 714


>06_03_0785 - 24563310-24565004,24565302-24565384,24565484-24566039,
            24566397-24566513,24566565-24567131,24568632-24568702,
            24569833-24569903,24570270-24570441,24571229-24572212,
            24573128-24574808
          Length = 1998

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 84   ILQTGCHKVAEEQKLEESDGL 146
            + Q+GCH   EE ++E  DGL
Sbjct: 1872 LYQSGCHTALEELRIESCDGL 1892


>02_05_0167 -
           26415319-26415494,26415591-26415840,26415909-26415974,
           26416457-26416600,26416813-26416868,26416966-26417101,
           26417190-26417277,26417379-26417482,26418515-26419180,
           26419337-26419432,26419974-26420242,26420334-26420489,
           26421153-26421192
          Length = 748

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 15/58 (25%), Positives = 30/58 (51%)
 Frame = +3

Query: 123 KLEESDGLPPASSSSIAAQEKPREELPTRALRPRSTLTRKTTNALSSQSVGSGGSAKR 296
           K+E     P    ++ A Q +  +++ T A  PRS   ++ +     ++VG+GGS+ +
Sbjct: 348 KMEILPSHPMTQQNAAAQQMQQNKDVKTNASNPRSN-AKQDSGTGKGRAVGTGGSSTK 404


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,465,838
Number of Sequences: 37544
Number of extensions: 151722
Number of successful extensions: 495
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)