Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H07
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    27   0.76 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    27   0.76 
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.3  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.1 bits (57), Expect = 0.76
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +3

Query: 114 EEQKLEESDGLPPASSSSIAAQEKPREELP----TRALRPRSTLTRKTTNALSSQSVGSG 281
           + QK  ESD     SSS +  Q++ ++  P    T ALR +   +    ++ SS+   S 
Sbjct: 16  KRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADSSHSSEEEESA 75

Query: 282 G 284
           G
Sbjct: 76  G 76


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.1 bits (57), Expect = 0.76
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = +3

Query: 114 EEQKLEESDGLPPASSSSIAAQEKPREELP----TRALRPRSTLTRKTTNALSSQSVGSG 281
           + QK  ESD     SSS +  Q++ ++  P    T ALR +   +    ++ SS+   S 
Sbjct: 16  KRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADSSHSSEEEESA 75

Query: 282 G 284
           G
Sbjct: 76  G 76


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 8/85 (9%)
 Frame = +3

Query: 39   LKILSFFDSIFEYYCILQTGCHKVAEEQKLEESDGLPPASSS--------SIAAQEKPRE 194
            LK +S F   F YYC  Q  CH     + +  +  L  A           +     +P E
Sbjct: 1508 LKSVSNFLGSFNYYCDHQNFCHPYCYRRHMRAATKLIRAIRKIYGDEFGVTPVTYAQPSE 1567

Query: 195  ELPTRALRPRSTLTRKTTNALSSQS 269
                   R RS   RK ++  SSQ+
Sbjct: 1568 SAKGTTRRERSKQGRKVSDQSSSQT 1592


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,919
Number of Sequences: 2352
Number of extensions: 4982
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)