Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_H04
(916 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.006
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.40
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 30 0.40
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom... 30 0.53
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 30 0.53
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.53
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.6
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 28 1.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 2.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.7
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 4.9
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.3 bits (80), Expect = 0.006
Identities = 27/81 (33%), Positives = 27/81 (33%)
Frame = +1
Query: 403 GXPPRGGXGXXXXGXGGGXXXXXXGPPPXXXGXAVSARPGGVXXXPGXPGGRPGXXVXPX 582
G PP G G G GG G G PGG PG GG PG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG------PGGFEGGPGGFGGGPGGFGGGL 251
Query: 583 GPPGAXXGKXGAGGGXXPXPG 645
G G G G G G PG
Sbjct: 252 GGFGGGPGGFGGGPGGHGGPG 272
Score = 34.3 bits (75), Expect = 0.024
Identities = 25/71 (35%), Positives = 25/71 (35%)
Frame = +1
Query: 415 RGGXGXXXXGXGGGXXXXXXGPPPXXXGXAVSARPGGVXXXPGXPGGRPGXXVXPXGPPG 594
RG G G GGG GPPP G GG G GG G G PG
Sbjct: 183 RGHNGGGFGGFGGGSG----GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPG 238
Query: 595 AXXGKXGAGGG 627
G G GG
Sbjct: 239 GFGGGPGGFGG 249
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = -3
Query: 845 PXGXXGGXPXXXGGGXGP-GXPXXGXPXGTXGXXGGSXGGGPPG 717
P G GG P GGG G G G G G GG G G PG
Sbjct: 230 PGGFEGG-PGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 29.9 bits (64), Expect = 0.53
Identities = 19/46 (41%), Positives = 19/46 (41%)
Frame = -3
Query: 839 GXXGGXPXXXGGGXGPGXPXXGXPXGTXGXXGGSXGGGPPGXXRXP 702
G GG P GG G G P G G GG GGGP G P
Sbjct: 224 GGFGGGPGGFEGGPG---GFGGGPGGFGGGLGG-FGGGPGGFGGGP 265
Score = 28.7 bits (61), Expect = 1.2
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -3
Query: 776 GXPXGTXGXXGGSXGGGPPGXXRXPAXXXXXXXGRAXVXXPXRGPGXGXXPPPAPXXPXX 597
G G G GG GG PPG P G G P P
Sbjct: 184 GHNGGGFGGFGGGSGGPPPG----PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGG 239
Query: 596 APGGPXGXTXXPGRPPGXPGXXXTPPG 516
GGP G G G PG PG
Sbjct: 240 FGGGPGGFGGGLGGFGGGPGGFGGGPG 266
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.40
Identities = 21/74 (28%), Positives = 23/74 (31%)
Frame = -3
Query: 623 PPAPXXPXXAPGGPXGXTXXPGRPPGXPGXXXTPPGRAETALPXXXGGGPXXXXXXPPPX 444
PP P AP P + P P G PP +P G P PPP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVP----PVPPPS 1214
Query: 443 PXXXXPXPPRGGXP 402
P P G P
Sbjct: 1215 TAPPVPTPSAGLPP 1228
Score = 28.7 bits (61), Expect = 1.2
Identities = 29/121 (23%), Positives = 31/121 (25%), Gaps = 3/121 (2%)
Frame = +1
Query: 478 PPPXXXGXAVSARPGGVXXXPGXPGGRPGXXVXPXGPPGAXXGKXGAGGGXXPXPGPRXG 657
P P G +P P G P P P A G P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAP-----PVPKPSVAAPPVPAPSGAPPVPKPSVA 1167
Query: 658 XX-TXARXXXXXXXXAGXLXXPGGPPPXDPPXXPXVPXGXPXXGXPGPXP--PPXXXGXP 828
A P PPP + P P G P P P P G P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Query: 829 P 831
P
Sbjct: 1228 P 1228
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/70 (27%), Positives = 21/70 (30%), Gaps = 1/70 (1%)
Frame = -3
Query: 623 PPAPXXPXXAPGGPXGXTXXPGRPPGXPGXXXTPPGRAETALPXXXGGGPXXXXXXPP-P 447
PP P AP P P P PP A + +P P PP P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV----PKPSVAAPPVP 1105
Query: 446 XPXXXXPXPP 417
P P P
Sbjct: 1106 KPSVAVPPVP 1115
Score = 27.1 bits (57), Expect = 3.7
Identities = 24/111 (21%), Positives = 26/111 (23%)
Frame = +1
Query: 478 PPPXXXGXAVSARPGGVXXXPGXPGGRPGXXVXPXGPPGAXXGKXGAGGGXXPXPGPRXG 657
P P G +P P G P P G P P P G
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP----APSSGIPPVPKPAAG 1187
Query: 658 XXTXARXXXXXXXXAGXLXXPGGPPPXDPPXXPXVPXGXPXXGXPGPXPPP 810
+ P PPP P P G P P PP
Sbjct: 1188 VPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 26.2 bits (55), Expect = 6.5
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 2/87 (2%)
Frame = -3
Query: 656 PXRGPGXGXXPPPAPXXPXXAPGGPXGXTXXPGRPPGXPGXXXTPPGRAETALPXXXGGG 477
P P P PAP P P G P G P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 476 PXXXXXXPP-PXPXXXXPXP-PRGGXP 402
P PP P P P P P G P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.3 bits (65), Expect = 0.40
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +1
Query: 727 PPPXDPPXXPXVPXGXPXXGXPGPXPPPXXXGXPPXXPXGGL 852
PPP PP VP P P P P P G PP P G+
Sbjct: 732 PPP--PPPAVIVPTPAPAP-IPVPPPAPIMGGPPPPPPPPGV 770
Score = 29.1 bits (62), Expect = 0.92
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +1
Query: 721 GGPPPXDPPXXPXVPXGXPXXGXPGPXPPP 810
GGPPP PP P V P P P PPP
Sbjct: 759 GGPPPPPPP--PGVAGAGPP---PPPPPPP 783
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 730 PPXDPPXXPXVPXGXPXXGXPGPXPPPXXXGXPPXXP 840
P P P P G P P PPP G P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 727 PPPXDPPXXPXVPXGXPXXGXPGPXPPPXXXGXPPXXPXGG 849
PPP P P P GP PPP PP GG
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPP---PPPAVSAGG 789
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 7/51 (13%)
Frame = +1
Query: 709 LXXPGGPPPX----DPPXXPX-VPXGXPXXGXPGPXPPPX--XXGXPPXXP 840
L P PPP P P VP P G P P PPP PP P
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = -3
Query: 665 VXXPXRGPGXGXXPPPAPXXPXXAPGGPXGXTXXPGRPPGXP 540
V P P PPPAP P P G PP P
Sbjct: 739 VIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 626 PPPAPXXPXXAPGGPXGXTXXPGRPPGXPGXXXTPP 519
P PAP P P G P PPG G PP
Sbjct: 744 PAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 577
Score = 29.9 bits (64), Expect = 0.53
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +2
Query: 164 KXXKKKKKXXXKXXKXXXKNXAPXPXGGAXXP 259
K KKKKK K K KN P P G A P
Sbjct: 436 KKKKKKKKNNKKKKKNKRKNIKPGPLGPAYVP 467
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.9 bits (64), Expect = 0.53
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -3
Query: 839 GXXGGXPXXXGGGXGPGXPXXGXPXGTXGXXGGSXGG 729
G GG GGG G G G G GGS GG
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.53
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -3
Query: 656 PXRGPGXGXXPPPAPXXPXXAPGGPXGXTXXPGRPPGXPGXXXTPPGRA 510
P P P AP P AP P P PP P PP A
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPA 481
Score = 27.9 bits (59), Expect = 2.1
Identities = 21/78 (26%), Positives = 24/78 (30%), Gaps = 4/78 (5%)
Frame = +1
Query: 619 GGGXXPXPGPRXGXXTXARXXXXXXXXAGXLXXPGGPPPXDP----PXXPXVPXGXPXXG 786
G P P PR T + A + P PPP P P P +
Sbjct: 357 GRSAPPPPPPRSAPSTGRQPPPLSSSRA--VSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 787 XPGPXPPPXXXGXPPXXP 840
P P PP PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLP 432
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +1
Query: 718 PGGPPPXDPPXXPXVPXGXPXXGXPGPXPPPXXXGXPPXXP 840
P PP PP P P P PP G P P
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 27.1 bits (57), Expect = 3.7
Identities = 35/152 (23%), Positives = 37/152 (24%), Gaps = 3/152 (1%)
Frame = -3
Query: 848 PPXGXXGGXPXXXGGGXGPGXPXXGXPXGTXGXXGGSXGGGPPGXXRXPAXXXXXXXGRA 669
PP G P G P P + GS P G P
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA--AGSIPLPPQGRSAPPPPPPRSAPSTG 373
Query: 668 XVXXPXRGPGXGXXPP-PAPXXPXX-APG-GPXGXTXXPGRPPGXPGXXXTPPGRAETAL 498
P PP P P P AP P G PP P PP +
Sbjct: 374 RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP-VPTPPSLPPSAPPSLP 432
Query: 497 PXXXGGGPXXXXXXPPPXPXXXXPXPPRGGXP 402
P P PP P P G P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 729 PPGXPPXXPXXAXGGPAXGXPWAXXPPXXXWXPPPXPXG 845
PP PP P A G P A P PP P G
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAG 462
Score = 26.6 bits (56), Expect = 4.9
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 2/71 (2%)
Frame = -3
Query: 626 PPPAPXX--PXXAPGGPXGXTXXPGRPPGXPGXXXTPPGRAETALPXXXGGGPXXXXXXP 453
PP AP P P P G P PP P P G A P P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM--PAAPPLPPAAP-----AP 476
Query: 452 PPXPXXXXPXP 420
PP P P
Sbjct: 477 PPAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/53 (32%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Frame = -3
Query: 557 RPPGXPGXXXTPPGRAETALPXXXGGGPXXXXXXPPPXP----XXXXPXPPRG 411
RPP P PP R P G PPP P P PP+G
Sbjct: 310 RPPPPP-----PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG 357
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +1
Query: 718 PGGPPPXDPPXXPXVPXGXPXXGXPGPXPPPXXXGXPP 831
P PP P P P P P PP PP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 7/47 (14%)
Frame = +1
Query: 727 PPPXDPPXX-----PXVPXGXPXXGXPGPXPPP--XXXGXPPXXPXG 846
PPP PP P + G P P PPP G P P G
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG 357
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 730 PPXDPPXXPXVPXGXPXXGXPGPXPPP 810
PP +PP P P G P P PPP
Sbjct: 5 PPGNPPPPPP-PPGFEPPSQPPPPPPP 30
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -3
Query: 809 GGGXGPGXPXXGXPXGTXGXXGGSXGGGPPG 717
G G G P G P G+ G GGG PG
Sbjct: 439 GSFPGGGFPGGGFPGGSYNSQGFGMGGGFPG 469
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 1/41 (2%)
Frame = +1
Query: 730 PPXDPPXXPXVPXGXPXX-GXPGPXPPPXXXGXPPXXPXGG 849
PP P P P P G P PPP P P G
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 3/43 (6%)
Frame = +1
Query: 721 GGPPPXDPPXXPXV---PXGXPXXGXPGPXPPPXXXGXPPXXP 840
GG P P P V P P P PPP PP P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 3.7
Identities = 21/81 (25%), Positives = 24/81 (29%), Gaps = 6/81 (7%)
Frame = -3
Query: 626 PP--PAPXXPXXAPGGPXGXTXXPGRPPGXPGXXXTPPGRA----ETALPXXXGGGPXXX 465
PP PAP P P P PP P P +A + P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 464 XXXPPPXPXXXXPXPPRGGXP 402
P P P PP+ P
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPP 204
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 796 AQGXPXAGPPXAXXGXXGGXPGGARRXP 713
A G P P G GG PGGA P
Sbjct: 611 AGGAPGGAPGGMPGGAPGGAPGGADNGP 638
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,822,147
Number of Sequences: 5004
Number of extensions: 25468
Number of successful extensions: 208
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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