Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H03
         (950 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    33   0.013
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    28   0.36 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    27   0.83 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.9  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    25   2.5  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    25   2.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   4.4  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   5.9  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   5.9  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   5.9  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   7.8  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 33.1 bits (72), Expect = 0.013
 Identities = 28/101 (27%), Positives = 30/101 (29%), Gaps = 4/101 (3%)
 Frame = +1

Query: 550 PPXRGGPXPXKXXXXAXPPPXPXXRPXAXAGXPPXPPPPPXXTKXGGRXXXXGGPPPXXK 729
           PP  GG  P         P  P   P A  G  P   P P   +   R    G PPP   
Sbjct: 211 PPRPGGMYPQPPGVPM--PMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRP 268

Query: 730 XXXXG---PPXXXXXXXXXXXXPXXXXXPP-PPXPXRXXAP 840
               G   P             P     PP PP P +  AP
Sbjct: 269 PNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAP 309



 Score = 26.2 bits (55), Expect = 1.5
 Identities = 23/80 (28%), Positives = 24/80 (30%)
 Frame = +2

Query: 509 GRXXPPPXGGGXSXPPXGGXPRPEXXXXXPXRPPPPXXGRXRXRXXPPAXPPXXXXLKXG 688
           G    PP   G   PP  G P        P RPP P  G        P   P    L  G
Sbjct: 243 GMQPRPPSAQGMQRPPMMGQP-------PPIRPPNPMGG------PRPQISPQNSNLSGG 289

Query: 689 VGXXXXGAPPPXXKXXPXAP 748
           +     G P P       AP
Sbjct: 290 MPSGMVGPPRPPMPMQGGAP 309



 Score = 23.8 bits (49), Expect = 7.8
 Identities = 15/41 (36%), Positives = 16/41 (39%)
 Frame = -3

Query: 717 GGAPXXXXPTPXFSXXXXGGXAGGXXRXRXRPXXGGGGRXG 595
           GG P    P P  +    GG A G       P  GGGG  G
Sbjct: 498 GGRPNA--PNPSSAVTPGGGRAEGDKVTFQIPNGGGGGGGG 536


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 28.3 bits (60), Expect = 0.36
 Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
 Frame = -3

Query: 720 GGGAPXXXXPTPXFSXXXXGGXAGGXXRX-----RXRPXXGGGGRXGXXXXFSGRG 568
           GGGAP     +        GG  GG  R      R R   G GG  G      GRG
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQLDGRG 263



 Score = 26.6 bits (56), Expect = 1.1
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -1

Query: 668 GGGGGXGGXPAXAXGLXXGXGGG 600
           GGGG  GG P    G   G G G
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPG 225


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 27.1 bits (57), Expect = 0.83
 Identities = 11/30 (36%), Positives = 11/30 (36%)
 Frame = +1

Query: 601 PPPXPXXRPXAXAGXPPXPPPPPXXTKXGG 690
           P P            PP PPPPP     GG
Sbjct: 769 PSPSRSAFADGIGSPPPPPPPPPSSLSPGG 798



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 363 GSPXGGGGGXXXXGRXXKSPPAGGG 437
           G P  GG G    G     PP GGG
Sbjct: 30  GPPEIGGTGAGALGSQQHQPPYGGG 54


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 22/87 (25%), Positives = 23/87 (26%), Gaps = 2/87 (2%)
 Frame = +1

Query: 640 GXPPXPPPPPXXTKXGGRXXXXGGPPPXXKXXXXGPPXXXXXXXXXXXXPXXXXXPPPPX 819
           G P  PPPPP              PPP         P            P      PPP 
Sbjct: 525 GGPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPA 584

Query: 820 P--XRXXAPPXXRXXGPPFXXXXGAPP 894
           P       PP     G P     G+ P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRP 611



 Score = 25.4 bits (53), Expect = 2.5
 Identities = 14/49 (28%), Positives = 16/49 (32%)
 Frame = +1

Query: 574 PXKXXXXAXPPPXPXXRPXAXAGXPPXPPPPPXXTKXGGRXXXXGGPPP 720
           P +    A  P  P  +P      PP   PPP     G      G  PP
Sbjct: 564 PAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPP 612



 Score = 24.6 bits (51), Expect = 4.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = -1

Query: 437 PPPRGGGFXXXPXTXXPPP 381
           PPP GG     P    PPP
Sbjct: 533 PPPPGGAVLNIPPQFLPPP 551



 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/27 (37%), Positives = 11/27 (40%)
 Frame = -1

Query: 434 PPRGGGFXXXPXTXXPPPPPXRXPXXG 354
           PP G G+     T  P  PP   P  G
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPGG 538



 Score = 24.2 bits (50), Expect = 5.9
 Identities = 14/39 (35%), Positives = 14/39 (35%)
 Frame = +2

Query: 500 GCLGRXXPPPXGGGXSXPPXGGXPRPEXXXXXPXRPPPP 616
           G LG   PPP GG     P    P P      P  P  P
Sbjct: 526 GPLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNP 564



 Score = 24.2 bits (50), Expect = 5.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -2

Query: 406 RPXXXXPPPPPXGDP 362
           +P    PPPPP G P
Sbjct: 580 QPPPAPPPPPPMGPP 594


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -1

Query: 668 GGGGGXGGXPAXAXGLXXGXGGGXAXXXXFXGXG 567
           GGG G GG      G   G GGG A    + G G
Sbjct: 677 GGGSGAGG----GAGSSGGSGGGLASGSPYGGGG 706


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 668 GGGGGXGGXPAXAXGLXXGXGG 603
           GGGGG GG      G+    GG
Sbjct: 556 GGGGGGGGGGGVGGGIGLSLGG 577


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 668 GGGGGXGGXPAXAXGLXXGXGG 603
           GGGGG GG      G+    GG
Sbjct: 557 GGGGGGGGGGGVGGGIGLSLGG 578


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 4.4
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -3

Query: 663 GGXAGGXXRXRXRPXXGGGGRXGXXXXFSGRGXPPXGG 550
           GG  GG          G GGR G      GRG    GG
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGG 92



 Score = 24.2 bits (50), Expect = 5.9
 Identities = 11/23 (47%), Positives = 11/23 (47%)
 Frame = -3

Query: 663 GGXAGGXXRXRXRPXXGGGGRXG 595
           GG  GG  R R R    GGG  G
Sbjct: 73  GGRGGGRGRGRGRGGRDGGGGFG 95


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 12/40 (30%), Positives = 14/40 (35%)
 Frame = +1

Query: 601 PPPXPXXRPXAXAGXPPXPPPPPXXTKXGGRXXXXGGPPP 720
           PPP    +  A    P  PP     +K   R      PPP
Sbjct: 643 PPPRTNSQSQASEPTPALPPRADRDSKPSSRDRPKDLPPP 682


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -1

Query: 659  GGXGGXPAXAXGLXXGXGGG 600
            GG GG P    G   G GGG
Sbjct: 1484 GGYGGSPTKGAGGGGGGGGG 1503


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 622  RPXAXAGXPPXPPPPP 669
            R    AG PP PPP P
Sbjct: 1060 RELQRAGRPPSPPPSP 1075


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +3

Query: 363 GSPXGGGGGXXXXGRXXKSPPAGGG 437
           G   GGGGG    G    S   GGG
Sbjct: 656 GGGGGGGGGSVGSGGIGSSSLGGGG 680


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.312    0.145    0.510 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,969
Number of Sequences: 2352
Number of extensions: 13016
Number of successful extensions: 64
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 104189652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)