Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H01
         (876 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0073 - 572794-572883,573188-573393,573491-573581                 69   5e-12
12_01_0074 - 615794-615883,616186-616391,616524-616614                 68   1e-11
12_02_0049 + 12890684-12890876,12891160-12891176                       38   0.011
11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793     30   2.1  
04_03_0661 - 18468244-18469580,18469610-18469619                       28   8.5  

>11_01_0073 - 572794-572883,573188-573393,573491-573581
          Length = 128

 Score = 68.9 bits (161), Expect = 5e-12
 Identities = 33/102 (32%), Positives = 56/102 (54%)
 Frame = +3

Query: 174 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 353
           + H  +   +R   E+ + + + +A  +   LV  ++ GV + Y+N+++++ EA+ L   
Sbjct: 17  QRHHHQSLHQRNKTERVKVDAVKSAARVADLLVATVDGGVQELYINERRIEFEARALLAT 76

Query: 354 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKII 479
              F KQT QWL      +S LKEIGD ENW + ++ D K I
Sbjct: 77  IARFKKQTDQWLAATNAINSVLKEIGDFENWMKIMDFDCKSI 118


>12_01_0074 - 615794-615883,616186-616391,616524-616614
          Length = 128

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 30/102 (29%), Positives = 56/102 (54%)
 Frame = +3

Query: 174 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 353
           + H      +R + ++++ + + +A  +   LV  ++ G  + Y+N+++++ EA+ L   
Sbjct: 17  QRHHHHSLHQRKITDREKIDAVRSAARVADLLVATVDGGAQELYINERRIEIEARALLAT 76

Query: 354 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKII 479
              + KQT QWL      +S LKEIGD ENW + ++ D K I
Sbjct: 77  IARYKKQTDQWLAATNAINSVLKEIGDYENWMKIMDFDCKSI 118


>12_02_0049 + 12890684-12890876,12891160-12891176
          Length = 69

 Score = 37.9 bits (84), Expect = 0.011
 Identities = 17/53 (32%), Positives = 31/53 (58%)
 Frame = +3

Query: 231 ECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWL 389
           + + +A  +   LV  ++ GV + Y+N+K+++ EA+ L      + KQT QWL
Sbjct: 2   DAVRSAARVADLLVATVDGGVQELYINEKRIELEARALLATIAWYRKQTDQWL 54


>11_04_0411 - 17367432-17368247,17368317-17368658,17372221-17372793
          Length = 576

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 25/117 (21%), Positives = 51/117 (43%)
 Frame = +3

Query: 180 HQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAI 359
           H+A+ A+        R+E  +A +D  +  +  L +   Q +L +  L+ E   L    +
Sbjct: 285 HRAELASTEFAHHPFREEGNSAVDDFYEEAL--LEIDDQQRHLGE--LETEVTDLTVQQL 340

Query: 360 NFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLXKSI*KSTRETKQ 530
              ++ Q W + +++  + L+  GD         ND + + DTL + + +S     Q
Sbjct: 341 QLEEEHQAWGSEIDSLKAQLQVRGDQFQQLSDQYNDRRGMLDTLEEQLRESQEHVSQ 397


>04_03_0661 - 18468244-18469580,18469610-18469619
          Length = 448

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 177 EHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKL-DAEAKLLHQ 350
           E Q ++ AK + ++ + +E   AA +  +   +      A+A LNQKKL + E KLL +
Sbjct: 92  EKQRRKEAKYLAKKMQEEEAARAAEEERKRKEEEAK-RAAEAALNQKKLKEKEKKLLRK 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,117,578
Number of Sequences: 37544
Number of extensions: 233303
Number of successful extensions: 542
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 542
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)