Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_H01
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S82447-1|AAB37682.1|  125|Homo sapiens GCN5-like 1 protein.           146   7e-35
D64007-1|BAA10887.1|  125|Homo sapiens RT14 protein.                  146   7e-35
BC132795-1|AAI32796.1|  125|Homo sapiens biogenesis of lysosome-...   146   7e-35
BC130640-1|AAI30641.1|  125|Homo sapiens biogenesis of lysosome-...   146   7e-35
BC001760-1|AAH01760.1|  567|Homo sapiens replication initiator 1...    30   9.6  
BC000363-1|AAH00363.2|  556|Homo sapiens replication initiator 1...    30   9.6  
AJ245553-1|CAB53100.1|  556|Homo sapiens AP4 protein protein.          30   9.6  
AF201303-1|AAF26712.1|  567|Homo sapiens dhfr oribeta-binding pr...    30   9.6  
AC005586-2|AAS00386.1|  556|Homo sapiens unknown protein.              30   9.6  
AC005586-1|AAS00385.1|  567|Homo sapiens unknown protein.              30   9.6  

>S82447-1|AAB37682.1|  125|Homo sapiens GCN5-like 1 protein.
          Length = 125

 Score =  146 bits (355), Expect = 7e-35
 Identities = 70/106 (66%), Positives = 84/106 (79%)
 Frame = +3

Query: 174 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 353
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 354 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTL 491
           A  F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   L
Sbjct: 67  AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATAL 112


>D64007-1|BAA10887.1|  125|Homo sapiens RT14 protein.
          Length = 125

 Score =  146 bits (355), Expect = 7e-35
 Identities = 70/106 (66%), Positives = 84/106 (79%)
 Frame = +3

Query: 174 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 353
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 354 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTL 491
           A  F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   L
Sbjct: 67  AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATAL 112


>BC132795-1|AAI32796.1|  125|Homo sapiens biogenesis of
           lysosome-related organelles complex-1, subunit 1
           protein.
          Length = 125

 Score =  146 bits (355), Expect = 7e-35
 Identities = 70/106 (66%), Positives = 84/106 (79%)
 Frame = +3

Query: 174 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 353
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 354 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTL 491
           A  F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   L
Sbjct: 67  AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATAL 112


>BC130640-1|AAI30641.1|  125|Homo sapiens biogenesis of
           lysosome-related organelles complex-1, subunit 1
           protein.
          Length = 125

 Score =  146 bits (355), Expect = 7e-35
 Identities = 70/106 (66%), Positives = 84/106 (79%)
 Frame = +3

Query: 174 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 353
           KEHQAKQ  ++ +QE++R+E ITAA  LT+ALVDHLNVGVAQAY+NQ+KLD E K L   
Sbjct: 7   KEHQAKQNERKELQEKRRREAITAATCLTEALVDHLNVGVAQAYMNQRKLDHEVKTLQVQ 66

Query: 354 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTL 491
           A  F+KQT QW+ +VENF+ ALKEIGDVENWARSIE DM+ I   L
Sbjct: 67  AAQFAKQTGQWIGMVENFNQALKEIGDVENWARSIELDMRTIATAL 112


>BC001760-1|AAH01760.1|  567|Homo sapiens replication initiator 1
           protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
 Frame = +2

Query: 263 SIGRSFKCRCCSSLFKSE-------KVRCGSKTF-TPRCNKFFQTNTAMVDSCGKFQQCS 418
           ++ R F+C CC   F+ +       +V  G +    P C K F TN   + S  +     
Sbjct: 231 AVDRPFQCACCGKRFRHKPNLIAHRRVHTGERPHQCPECGKRF-TNKPYLTSHRRI-HTG 288

Query: 419 QRNWGCRKLGTKYRK*YENYYRHFXKEHMKKHKRNQ 526
           ++ + C++ G ++R      ++     H K HKR++
Sbjct: 289 EKPYPCKECGRRFR------HKPNLLSHSKIHKRSE 318


>BC000363-1|AAH00363.2|  556|Homo sapiens replication initiator 1
           protein.
          Length = 556

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
 Frame = +2

Query: 263 SIGRSFKCRCCSSLFKSE-------KVRCGSKTF-TPRCNKFFQTNTAMVDSCGKFQQCS 418
           ++ R F+C CC   F+ +       +V  G +    P C K F TN   + S  +     
Sbjct: 220 AVDRPFQCACCGKRFRHKPNLIAHRRVHTGERPHQCPECGKRF-TNKPYLTSHRRI-HTG 277

Query: 419 QRNWGCRKLGTKYRK*YENYYRHFXKEHMKKHKRNQ 526
           ++ + C++ G ++R      ++     H K HKR++
Sbjct: 278 EKPYPCKECGRRFR------HKPNLLSHSKIHKRSE 307


>AJ245553-1|CAB53100.1|  556|Homo sapiens AP4 protein protein.
          Length = 556

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
 Frame = +2

Query: 263 SIGRSFKCRCCSSLFKSE-------KVRCGSKTF-TPRCNKFFQTNTAMVDSCGKFQQCS 418
           ++ R F+C CC   F+ +       +V  G +    P C K F TN   + S  +     
Sbjct: 220 AVDRPFQCACCGKRFRHKPNLIAHRRVHTGERPHQCPECGKRF-TNKPYLTSHRRI-HTG 277

Query: 419 QRNWGCRKLGTKYRK*YENYYRHFXKEHMKKHKRNQ 526
           ++ + C++ G ++R      ++     H K HKR++
Sbjct: 278 EKPYPCKECGRRFR------HKPNLLSHSKIHKRSE 307


>AF201303-1|AAF26712.1|  567|Homo sapiens dhfr oribeta-binding
           protein RIP60 protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
 Frame = +2

Query: 263 SIGRSFKCRCCSSLFKSE-------KVRCGSKTF-TPRCNKFFQTNTAMVDSCGKFQQCS 418
           ++ R F+C CC   F+ +       +V  G +    P C K F TN   + S  +     
Sbjct: 231 AVDRPFQCACCGKRFRHKPNLIAHRRVHTGERPHQCPECGKRF-TNKPYLTSHRRI-HTG 288

Query: 419 QRNWGCRKLGTKYRK*YENYYRHFXKEHMKKHKRNQ 526
           ++ + C++ G ++R      ++     H K HKR++
Sbjct: 289 EKPYPCKECGRRFR------HKPNLLSHSKIHKRSE 318


>AC005586-2|AAS00386.1|  556|Homo sapiens unknown protein.
          Length = 556

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
 Frame = +2

Query: 263 SIGRSFKCRCCSSLFKSE-------KVRCGSKTF-TPRCNKFFQTNTAMVDSCGKFQQCS 418
           ++ R F+C CC   F+ +       +V  G +    P C K F TN   + S  +     
Sbjct: 220 AVDRPFQCACCGKRFRHKPNLIAHRRVHTGERPHQCPECGKRF-TNKPYLTSHRRI-HTG 277

Query: 419 QRNWGCRKLGTKYRK*YENYYRHFXKEHMKKHKRNQ 526
           ++ + C++ G ++R      ++     H K HKR++
Sbjct: 278 EKPYPCKECGRRFR------HKPNLLSHSKIHKRSE 307


>AC005586-1|AAS00385.1|  567|Homo sapiens unknown protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 23/96 (23%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
 Frame = +2

Query: 263 SIGRSFKCRCCSSLFKSE-------KVRCGSKTF-TPRCNKFFQTNTAMVDSCGKFQQCS 418
           ++ R F+C CC   F+ +       +V  G +    P C K F TN   + S  +     
Sbjct: 231 AVDRPFQCACCGKRFRHKPNLIAHRRVHTGERPHQCPECGKRF-TNKPYLTSHRRI-HTG 288

Query: 419 QRNWGCRKLGTKYRK*YENYYRHFXKEHMKKHKRNQ 526
           ++ + C++ G ++R      ++     H K HKR++
Sbjct: 289 EKPYPCKECGRRFR------HKPNLLSHSKIHKRSE 318


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,822,196
Number of Sequences: 237096
Number of extensions: 1387862
Number of successful extensions: 2929
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2929
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)