Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_H01
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30423-8|CAA83011.1| 129|Caenorhabditis elegans Hypothetical pr... 131 7e-31
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 32 0.47
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 32 0.47
U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ... 29 5.8
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z30423-8|CAA83011.1| 129|Caenorhabditis elegans Hypothetical
protein T20G5.10 protein.
Length = 129
Score = 131 bits (316), Expect = 7e-31
Identities = 62/109 (56%), Positives = 79/109 (72%)
Frame = +3
Query: 174 KEHQAKQAAKRVVQEQKRKECITAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQG 353
KEH KQ +R VQE+ + E I AA L+ A+VDHLN VAQAY NQK+LD EAK
Sbjct: 3 KEHSKKQHLRREVQEKLKNEAIVAAQTLSTAVVDHLNAKVAQAYGNQKRLDVEAKRFENN 62
Query: 354 AINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLXKS 500
+ +KQT+QWL + E + ALKEIGDVENW+++IENDMKIIT+TL ++
Sbjct: 63 SAALAKQTEQWLFITEGLNYALKEIGDVENWSKTIENDMKIITETLRRA 111
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 306 LNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 485
LN+ E K+ H I +K QQ L EN + GD+E R +E D+K+ +
Sbjct: 1019 LNEDLQSEEDKVNHLEKIR-NKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQE 1077
Query: 486 TL 491
+
Sbjct: 1078 NI 1079
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 32.3 bits (70), Expect = 0.47
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 306 LNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITD 485
LN+ E K+ H I +K QQ L EN + GD+E R +E D+K+ +
Sbjct: 1019 LNEDLQSEEDKVNHLEKIR-NKLEQQMDELEENIDREKRSRGDIEKAKRKVEGDLKVAQE 1077
Query: 486 TL 491
+
Sbjct: 1078 NI 1079
>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical
protein C18H2.5 protein.
Length = 1139
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Frame = +3
Query: 240 TAANDLTQALVDHLNVGVAQAYLNQKKLDAEAKLLHQGAINFSKQTQQWLTLVENF--SS 413
TA + L +++LN Q +N+KK D + +LLH+ + S T +++T V SS
Sbjct: 455 TALDSLNNLNLENLN---PQETINEKKYDTDYQLLHKSSKIHS--TVEFITSVRRIGNSS 509
Query: 414 ALKEIGDVENWARSIENDMKIITDTLXKSI*KSTRETKQ 530
K+I D A I +DM+ + K + ++ R++KQ
Sbjct: 510 DHKKIKD----AVKIYSDMRTDYVAVEKFLEETRRQSKQ 544
>Z93373-2|CAN99669.1| 1671|Caenorhabditis elegans Hypothetical
protein C01B9.1b protein.
Length = 1671
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 375 FVWKNLLHLGVKVLLPH-LTFSDLNRLEQHRHLNDLPML 262
F ++ HLG+ ++ H ++F DL L++H +D+P +
Sbjct: 520 FARRDFGHLGIAKIIAHPISFEDLTFLKEHFITSDIPQM 558
>Z93373-1|CAB07551.1| 1601|Caenorhabditis elegans Hypothetical
protein C01B9.1a protein.
Length = 1601
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 375 FVWKNLLHLGVKVLLPH-LTFSDLNRLEQHRHLNDLPML 262
F ++ HLG+ ++ H ++F DL L++H +D+P +
Sbjct: 450 FARRDFGHLGIAKIIAHPISFEDLTFLKEHFITSDIPQM 488
>Z93377-3|CAB07580.1| 358|Caenorhabditis elegans Hypothetical
protein F13A7.7 protein.
Length = 358
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 144 CLIIKQYEFKKDNYICTY 91
CLI K+YE + DN+ C Y
Sbjct: 163 CLIDKEYELQSDNFSCGY 180
>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
protein Y80D3A.2 protein.
Length = 1467
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 312 QKKLDAEAKLLHQGAINFS-KQTQQWLTLVENFSSALKEIGDV 437
++ L+ E G +N+ K+ Q L VE + ALK +GDV
Sbjct: 887 EEALETEKDFSRYGRVNYVLKERLQLLNCVEKLAKALKIVGDV 929
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +3
Query: 366 SKQTQQWLTLVENFSSALKEIGDVENWARSIENDMKIITDTLXKSI 503
+++T+QW+T VEN + E + + +++ ++T TL KSI
Sbjct: 598 TEETKQWMTFVENAQKGIME-RVYTSTESTTKSEKTMMTTTLKKSI 642
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,743,615
Number of Sequences: 27780
Number of extensions: 246566
Number of successful extensions: 728
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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