Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G24
(900 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-33|AAP13743.1| 238|Caenorhabditis elegans Hypothetical... 316 1e-86
AC024817-32|AAP13741.1| 543|Caenorhabditis elegans Hypothetical... 316 1e-86
AC024817-31|AAP13742.1| 563|Caenorhabditis elegans Hypothetical... 316 1e-86
AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical ... 29 3.4
Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z72514-3|CAA96673.1| 741|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical pr... 28 7.9
U40060-4|AAY86193.1| 406|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical ... 28 7.9
AF025457-5|AAB70962.1| 235|Caenorhabditis elegans Hypothetical ... 28 7.9
AC024775-4|AAK68453.4| 88|Caenorhabditis elegans Hypothetical ... 28 7.9
>AC024817-33|AAP13743.1| 238|Caenorhabditis elegans Hypothetical
protein Y54G2A.17c protein.
Length = 238
Score = 316 bits (777), Expect = 1e-86
Identities = 141/210 (67%), Positives = 174/210 (82%)
Frame = +2
Query: 86 NGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMKFLEN 265
+ +VQPLLTD YQITM YAYWK+G N+ AVFD+FFR NPFQGEFT+FAGLE+C++F+EN
Sbjct: 5 DSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLRFVEN 64
Query: 266 FHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVEGPLI 445
F +S SDI Y+K+ LPEN EPEFY YL+ L + + A+ EGSVVFP+VPLL + GPL
Sbjct: 65 FKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTINGPLA 124
Query: 446 VAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSASKYAYIG 625
+ QL+ET++L LVN+ASL+ATNAAR+R +G + LLEFGLRRAQGP+GGL+ASKY YIG
Sbjct: 125 MCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKYCYIG 184
Query: 626 GFDGTSNVLAGKMFNIPVKGTHAHSFVTSF 715
GFD TSNVLAGK++ IPVKGT AHSF+ SF
Sbjct: 185 GFDATSNVLAGKLYGIPVKGTQAHSFICSF 214
>AC024817-32|AAP13741.1| 543|Caenorhabditis elegans Hypothetical
protein Y54G2A.17a protein.
Length = 543
Score = 316 bits (777), Expect = 1e-86
Identities = 141/210 (67%), Positives = 174/210 (82%)
Frame = +2
Query: 86 NGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMKFLEN 265
+ +VQPLLTD YQITM YAYWK+G N+ AVFD+FFR NPFQGEFT+FAGLE+C++F+EN
Sbjct: 5 DSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLRFVEN 64
Query: 266 FHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVEGPLI 445
F +S SDI Y+K+ LPEN EPEFY YL+ L + + A+ EGSVVFP+VPLL + GPL
Sbjct: 65 FKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTINGPLA 124
Query: 446 VAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSASKYAYIG 625
+ QL+ET++L LVN+ASL+ATNAAR+R +G + LLEFGLRRAQGP+GGL+ASKY YIG
Sbjct: 125 MCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKYCYIG 184
Query: 626 GFDGTSNVLAGKMFNIPVKGTHAHSFVTSF 715
GFD TSNVLAGK++ IPVKGT AHSF+ SF
Sbjct: 185 GFDATSNVLAGKLYGIPVKGTQAHSFICSF 214
>AC024817-31|AAP13742.1| 563|Caenorhabditis elegans Hypothetical
protein Y54G2A.17b protein.
Length = 563
Score = 316 bits (777), Expect = 1e-86
Identities = 141/210 (67%), Positives = 174/210 (82%)
Frame = +2
Query: 86 NGIVQPLLTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMKFLEN 265
+ +VQPLLTD YQITM YAYWK+G N+ AVFD+FFR NPFQGEFT+FAGLE+C++F+EN
Sbjct: 25 DSLVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLRFVEN 84
Query: 266 FHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPRVPLLRVEGPLI 445
F +S SDI Y+K+ LPEN EPEFY YL+ L + + A+ EGSVVFP+VPLL + GPL
Sbjct: 85 FKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTINGPLA 144
Query: 446 VAQLLETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSASKYAYIG 625
+ QL+ET++L LVN+ASL+ATNAAR+R +G + LLEFGLRRAQGP+GGL+ASKY YIG
Sbjct: 145 MCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKYCYIG 204
Query: 626 GFDGTSNVLAGKMFNIPVKGTHAHSFVTSF 715
GFD TSNVLAGK++ IPVKGT AHSF+ SF
Sbjct: 205 GFDATSNVLAGKLYGIPVKGTQAHSFICSF 234
>AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical
protein M151.1 protein.
Length = 402
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 233 GLEECMKFLENFHYSNSDIKYLKQTLPENIEPEFYLYLKELTCKDIIVSAIEEGSVVFPR 412
G++ C+ FL++ D K +K+ LP ++P + + C D+ EGS P+
Sbjct: 260 GIKSCVNFLQD---PQRDAKSIKKELPVQVDPSTPRDNELMDCSDLSRWLFTEGSQTTPQ 316
>Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 458 LETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSAS 607
L+ L L +F++ ++ R + + K VSL ++ +RR+ G D G S S
Sbjct: 557 LDIDLGKLKDFSTPESSGNKRPSISSSKGVSLSDYRMRRSGGGDAGSSTS 606
>Z72514-3|CAA96673.1| 741|Caenorhabditis elegans Hypothetical
protein T10B10.3 protein.
Length = 741
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 242 ECMKFLENFHYSNSDIKYLKQT 307
EC K +E+FH N ++YL T
Sbjct: 335 ECFKVIESFHSDNMKLRYLVMT 356
>Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 28.3 bits (60), Expect = 7.9
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 458 LETTLLTLVNFASLMATNAARYRMVAGKNVSLLEFGLRRAQGPDGGLSAS 607
L+ L L +F++ ++ R + + K VSL ++ +RR+ G D G S S
Sbjct: 557 LDIDLGKLKDFSTPESSGNKRPSISSSKGVSLSDYRMRRSGGGDAGSSTS 606
>U40060-4|AAY86193.1| 406|Caenorhabditis elegans Hypothetical
protein F38B6.8 protein.
Length = 406
Score = 28.3 bits (60), Expect = 7.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 501 WPRTLRDI-GWWP-VKMYPYSNSDYGERKDPMEGYRRPNMRTSVGLTGPATFWR 656
+PR R I G +P ++ Y + N + G P YR P + G GP F+R
Sbjct: 152 FPRITRSIRGQFPDLRYYNFPNGNEGIESFP-PSYRIPEWQAHAGWLGPRPFFR 204
>AF025463-3|AAB71009.2| 403|Caenorhabditis elegans Hypothetical
protein K10B4.4 protein.
Length = 403
Score = 28.3 bits (60), Expect = 7.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 433 RSAHCGTAIGDHSANISQLCQFDGHER 513
RSA C T +GDH AN F GH+R
Sbjct: 343 RSAFCRTILGDHIANF----VFKGHQR 365
>AF025457-5|AAB70962.1| 235|Caenorhabditis elegans Hypothetical
protein C08E3.2 protein.
Length = 235
Score = 28.3 bits (60), Expect = 7.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 542 FYRPPSDISQRSWPSNWQ 489
FY PSD +QR W NW+
Sbjct: 44 FYYSPSDKNQRRWVFNWE 61
>AC024775-4|AAK68453.4| 88|Caenorhabditis elegans Hypothetical
protein Y41D4A.3 protein.
Length = 88
Score = 28.3 bits (60), Expect = 7.9
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 107 LTDLYQITMAYAYWKSGKVNDVAVFDLFFRTNPFQGEFTIFAGLEECMK 253
+T Y T + KS + +D + +LFF+T PF I + C+K
Sbjct: 39 ITMFYFHTAYPSVHKSNRSDDFPIIELFFQTLPFINYLQIIQIILPCLK 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,279,833
Number of Sequences: 27780
Number of extensions: 431448
Number of successful extensions: 1036
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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