Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G23
(907 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0149 - 22733703-22736216 36 0.033
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 36 0.044
04_02_0013 - 8544589-8544873,8545175-8545339,8545444-8545707,854... 35 0.077
12_02_0953 - 24736642-24736673,24737104-24737188,24737267-247373... 33 0.24
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 33 0.31
03_01_0096 + 763850-764027,764873-765189,765262-765433,765513-76... 32 0.72
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 32 0.72
02_01_0267 - 1766071-1766261,1766368-1766569,1766719-1766814,176... 32 0.72
05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,300... 31 0.95
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 31 0.95
12_02_0847 + 23630937-23631099,23631200-23631396,23631604-236317... 31 1.7
09_06_0219 + 21642064-21642126,21643472-21643579,21643669-21643890 31 1.7
10_08_0520 - 18495118-18498237 29 3.8
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 29 3.8
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 29 5.1
08_02_1571 - 27935756-27935950,27936048-27936199,27936294-279364... 29 5.1
01_03_0151 - 13229861-13230347,13230442-13230540,13230701-132309... 29 5.1
09_04_0613 + 18953761-18953932,18954672-18954799,18954885-189549... 29 6.7
>05_05_0149 - 22733703-22736216
Length = 837
Score = 36.3 bits (80), Expect = 0.033
Identities = 34/159 (21%), Positives = 62/159 (38%), Gaps = 2/159 (1%)
Frame = +1
Query: 85 IGVPVLIDNIDNFF-KTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELS 261
+ V L D +D K +D ++ Q + +RMKTE++ + E S +A+ S
Sbjct: 308 VSVTDLADKVDRLVEKVIDLELATTSQNAQINRMKTEIDDLHKCLQALEEEKSALVADSS 367
Query: 262 RRSGELDNVCASLQSCLSIADSDKNRLENA-KETYQLVKELTGVRLDFSAPPNLAKGYIK 438
+ L V LQ+ + +S +N +N KE EL P G++
Sbjct: 368 KLVDRLKQVEEVLQAVQHLGNSIQNGTQNIHKEMNAACSELAEFVEKLHEPEPQNSGFMN 427
Query: 439 NESRKVLQPFEVDSADSNALWNLIQSVSGDWSDKENKPR 555
+ Q + + A S+ G ++ E + +
Sbjct: 428 SSQESSCQEEDSEVTSQYAKKQTSDSIDGSKNEVEKQDK 466
>05_07_0116 -
27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 35.9 bits (79), Expect = 0.044
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +1
Query: 136 DDKIEKEQQQLKASR-----MKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASL 300
DDK+ ++QL+AS E + + K+ + S R+AEL +S +L+ C SL
Sbjct: 517 DDKLALLRKQLEASEGHRAEYLRRYEESINDKQKISRDYSGRIAELQTKSSKLEERCVSL 576
Query: 301 QSCLSIADSDKNRLENAKETYQLVKE 378
S L A + +N K + L+++
Sbjct: 577 SSALDNAKRESVDWKN-KYDHNLLQQ 601
>04_02_0013 -
8544589-8544873,8545175-8545339,8545444-8545707,
8545822-8545944,8546032-8546151
Length = 318
Score = 35.1 bits (77), Expect = 0.077
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +1
Query: 211 QETKVHNELSERLAELSRRSGELDNVCASLQSCLSIADSDKNRLENAKETYQLVKELTGV 390
++ V +L LAE SR + E N+ QS + + + + ++ E+Y+ V E G+
Sbjct: 221 EDDLVRLQLEALLAEKSRLAQENANLSRENQSLIQLVEYHQLTSQDLAESYEDVME--GM 278
Query: 391 RLDFSAP 411
RLDFS+P
Sbjct: 279 RLDFSSP 285
>12_02_0953 - 24736642-24736673,24737104-24737188,24737267-24737386,
24737484-24737549,24737629-24737799,24737901-24737999,
24738075-24738186,24738282-24738343,24738412-24738483,
24738583-24738681,24738764-24738997,24739104-24739178,
24739299-24739386,24739478-24739638,24739734-24739841,
24739934-24741922,24742007-24742279,24742957-24743295,
24743449-24745038,24745166-24745241,24745333-24745412,
24745614-24745679,24745761-24745830,24745899-24746134,
24746149-24746319,24746915-24747097,24747176-24747241,
24747326-24747389,24747472-24747530,24747612-24747699,
24747799-24747891,24747956-24748116,24748215-24748307,
24748405-24748518,24748654-24748773,24748852-24748935,
24749016-24749171,24749518-24750154,24752874-24752929
Length = 2815
Score = 33.5 bits (73), Expect = 0.24
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +1
Query: 133 LDDKIEKEQQQLKASRMKTELETKLAQETKVH-NELSERLAELSRRSGELDNVCASLQSC 309
L++K+E Q + S ++A+E K H E E + L R EL+ +L++
Sbjct: 2265 LNEKLEMAQALAEESEAIATEAKQMAEERKTHAEEKDEEVKLLERSIEELETTVCALENK 2324
Query: 310 LSIADSDKNRLENAKETYQLVKELTGVRLDFSAPPN 417
+ I + R +E +L EL VR A P+
Sbjct: 2325 VDIIKEEAERQRMHREEIEL--ELQKVRQQMLAVPS 2358
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 33.1 bits (72), Expect = 0.31
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Frame = +1
Query: 61 IIYXWNQKIGVPVLIDNIDNFFKTLDDKIEKEQQQLKASRM-----KTELETKLAQETKV 225
+ Y N+K + I + + L DK+E++Q +++ R+ + E + KL++
Sbjct: 794 LTYMTNEKESSELQIHDSKSLIVNLKDKVERQQAEMETQRLEFKQKQQEAQRKLSEAQDD 853
Query: 226 HNELSERLAELSRRSGELDNVCASLQSCLSIADSDKNRLENAKETYQLVKEL 381
L ++L L C+SLQ+ IA+ + +LE Q +EL
Sbjct: 854 SEVLRRSNSKLQSTVESLIEECSSLQN--QIAELKRQKLELHGHLTQQEQEL 903
>03_01_0096 +
763850-764027,764873-765189,765262-765433,765513-765586,
765658-765835,765917-766026,766122-766221,766305-766391,
766505-766681,766847-767120,767201-767362,767450-767665,
767744-767781,768044-768102,768214-768339,768415-768540,
768642-768695,768789-768851,768924-768986,769079-769141,
769232-769732
Length = 1045
Score = 31.9 bits (69), Expect = 0.72
Identities = 23/88 (26%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Frame = +1
Query: 127 KTLDDKIEKEQQQLKASRMKT-ELETKLAQETKVHNELS--ERLAELSRRSGELDNVCAS 297
+ L++K + ++Q K + K ELE++L ++K+H++++ ++ EL + E + +C +
Sbjct: 737 QNLENKAKGKEQFYKNLQEKVKELESQL--DSKMHSQITSEKQQNELFGKLKEKEEMCTT 794
Query: 298 LQSCLSIADSDKNRLENAKETYQLVKEL 381
LQ IA+ +++L +++ +KEL
Sbjct: 795 LQQ--KIAEESEHKLRLQQQSESEIKEL 820
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 31.9 bits (69), Expect = 0.72
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = +1
Query: 100 LIDNIDNFFKTLDDKIEKE----QQQLKASRMKTELETKLAQETKVHNELSERLAELSRR 267
LIDNID+ ++ +++E Q+ L+ R + E+E + Q +K EL E+ EL+R+
Sbjct: 572 LIDNIDHQRLENEELLKRERADLQRNLQLHRHELEMEMEKKQASK-ERELEEKENELNRK 630
Query: 268 SGELDNVCASLQSCLSIADSDKNRLENAKETYQLVKEL 381
++N L+ + +S ++ K+ Q KE+
Sbjct: 631 MDFVEN---ELKRAAELNESKIQKILLEKKQLQKEKEV 665
>02_01_0267 -
1766071-1766261,1766368-1766569,1766719-1766814,
1767414-1767560,1767635-1767800,1767907-1767973,
1772850-1772949,1773029-1773099,1773199-1773382,
1773784-1773929,1774484-1774663,1774737-1774824,
1775634-1775838,1775945-1776081,1776529-1776612,
1776718-1776894,1777050-1777194,1777642-1777763,
1777846-1778091,1778571-1778789,1779016-1779094,
1779178-1779257,1779291-1779320
Length = 1053
Score = 31.9 bits (69), Expect = 0.72
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Frame = +1
Query: 82 KIGVPVLIDNIDNFFKTLDDKIEKEQQQLKAS------RMKTELETKL--AQETKVHNEL 237
K+G+ + I + K L KIE +++LKA+ R + E E + A + E
Sbjct: 626 KVGIASTMKQIGSLEKALGKKIETRKEELKANLSTNLMRRQKEFEAVISSADSKTLSLEA 685
Query: 238 SERLAELSRRSGELDNVCASLQSCLSIADSDKNRLENAKETYQLVKEL 381
+ EL+ LD++ A L++ + ++ ++E K +K L
Sbjct: 686 ESKEQELNSSKSSLDDLTAMLKANVDAINNFTIKIEELKRQRDNLKTL 733
>05_01_0384 + 2997465-2999777,2999960-3000035,3003027-3003102,
3003571-3004442,3004592-3004773,3005206-3005295,
3005388-3005675,3005776-3005997,3006053-3006133,
3006634-3006861
Length = 1475
Score = 31.5 bits (68), Expect = 0.95
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 115 DNFFKTLDDKIEKEQQQLKASRMKTELETKLAQET--KVHNELSERLAELSRRSGELDNV 288
D + +L +E + LK+ + + +LA E + +E + L ELD
Sbjct: 1090 DERYLSLGKMMESRENMLKSCNTEIQKMQQLAYEQAQRTVDENQKLRLNLQSMMHELDAN 1149
Query: 289 CASLQSCLSIADSDKNRLE 345
C L+ + ADSDK LE
Sbjct: 1150 CKRLEELTAQADSDKRNLE 1168
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 31.5 bits (68), Expect = 0.95
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +1
Query: 127 KTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQS 306
+ LD + +++Q +K + L +L+ K LSE + EL L+S
Sbjct: 246 RLLDQQTAQKKQAMKFQEQEASLLDQLSSTKKTVTSLSEEFRREKTLAEELREEIRRLES 305
Query: 307 CLSIADSDKNRLE 345
L+ A DK+ LE
Sbjct: 306 SLAQAGDDKDVLE 318
>12_02_0847 +
23630937-23631099,23631200-23631396,23631604-23631738,
23631904-23632077,23632195-23632407,23632507-23632751,
23632890-23632930,23633200-23633238,23633552-23633565
Length = 406
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 97 VLIDNIDNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGE 276
VL++ +D + E+E+ QL+ LE + +NEL E+SR++ E
Sbjct: 28 VLVEYMDMKNVVAEIAEERERFQLEQRGNDALLEAMKEELVAANNELEAAKEEISRKNNE 87
Query: 277 LDNVCASLQ 303
L++V LQ
Sbjct: 88 LESVKKQLQ 96
>09_06_0219 + 21642064-21642126,21643472-21643579,21643669-21643890
Length = 130
Score = 30.7 bits (66), Expect = 1.7
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +1
Query: 100 LIDNIDNFFKTLDDKIEKEQQQLKASRMKTELE-TKLAQETKVHNELSERLAELSRRSGE 276
L + + + ++ +E+ +L+A LE TK+ ++T + E AEL + S
Sbjct: 11 LFQLLSDLLQQVESMSNQEEVELRAKIEALGLEVTKVPEQTPKQLDELEIAAELDKLSAR 70
Query: 277 LDNVCASLQSCLSIADSDKNRLENAKETYQLV 372
LDNV + S ++ K+ L + + V
Sbjct: 71 LDNVDKMISSAMASDPEVKSLLSTTADIWMPV 102
>10_08_0520 - 18495118-18498237
Length = 1039
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +1
Query: 115 DNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCA 294
D ++++D +++ ++ + +R+K E+E A K+ +E+ A+L R+ +L
Sbjct: 212 DAVWESIDQRMDSRRKDRREARLKQEIEKYRASNPKI----TEQFADLKRKLVDL----- 262
Query: 295 SLQSCLSIADSDKNRLENAKETYQ 366
S Q SI + L N K+ ++
Sbjct: 263 SAQEWESIPEIGDYSLRNKKKRFE 286
>04_04_1144 + 31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 76 NQKIGVPVLIDNIDNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAE 255
NQ+ V V D + K +D++E EQQ + ++ + QET++H + E
Sbjct: 1651 NQEEQVSVREIKWDAYKKFSEDQLEAEQQHVAELEVQVSSLKQQLQETEIHYKHKEEQVS 1710
Query: 256 LSRRSGELD 282
L E D
Sbjct: 1711 LREVQWEAD 1719
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +1
Query: 160 QQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLSIADSDKNR 339
+ LK +T LE Q+ K+ + ++ L ++ S ELD+ LQ S ++
Sbjct: 339 KSLKEKLDETNLEISSMQK-KIEDARAQDLESIATVSTELDDAKEMLQKVAEEESSLRSL 397
Query: 340 LENAKETYQLVKE 378
+E+ K+ + VKE
Sbjct: 398 VESLKQELEAVKE 410
>08_02_1571 -
27935756-27935950,27936048-27936199,27936294-27936403,
27936845-27937050,27937212-27937295,27937367-27937525,
27937621-27937728,27938103-27938278,27938376-27938462,
27938546-27938657,27938737-27938817,27938890-27938943,
27939107-27939183,27939262-27939331,27939552-27939666,
27939840-27939937,27940041-27940179,27940267-27940868,
27941270-27941399,27941471-27941529
Length = 937
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 139 DKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLS 315
D+ ++E+ + KA + E + T L K N+L E+ + S +L + + CL
Sbjct: 420 DRYQQEENERKAMADQIEQMTTSLEANQKQINDLQEKYDSELQHSADLSKKLEATEKCL- 478
Query: 316 IADSDKNRLENAKE 357
D N L KE
Sbjct: 479 --DHTSNLLSTTKE 490
>01_03_0151 -
13229861-13230347,13230442-13230540,13230701-13230918,
13231210-13231317,13231366-13231518,13232962-13233015,
13233276-13233374,13234458-13234551,13234638-13234715,
13237696-13237766,13238321-13238416,13238505-13238582,
13238683-13238751,13238830-13238897,13239038-13239115,
13239190-13239289,13240002-13240061,13240488-13240579,
13241730-13241779,13241870-13241954,13242035-13242134,
13242933-13243013,13244827-13244907
Length = 832
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +1
Query: 127 KTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQS 306
K +DD +EK++ + AS + E VH+E +R A+ + S + C +
Sbjct: 752 KRMDD-LEKQEPRSPASSSSGSEANGVFGEHSVHSEEHQRSADNTEASRQAGGDCVNAMG 810
Query: 307 CLSIADSDKNRLENAKETYQL 369
LS S N E Y +
Sbjct: 811 NLSTEKSVNTTNTNDSEPYSV 831
>09_04_0613 +
18953761-18953932,18954672-18954799,18954885-18954956,
18955033-18955146,18955547-18955615,18955691-18955747,
18956262-18956315,18956387-18956449,18956543-18956605,
18956803-18956967,18957111-18957266,18957315-18957416
Length = 404
Score = 28.7 bits (61), Expect = 6.7
Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +1
Query: 154 EQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELD----NVCASLQSCLSIA 321
E+Q KA+ ELE ++ + K + + + + R+G+ D + A L+ +
Sbjct: 108 EEQAGKANARAIELEKQIEKLKKDIEAQNSKKSTVEARAGDADKKVQELNAKLEKLQKTS 167
Query: 322 DSDKNRLENAKETYQLV-KELTGVRLDFSAPPNLAK 426
D K R++ + ++ +EL V+L+ + N K
Sbjct: 168 DEQKRRIQKTEHALKVAEEELMRVQLETTTQLNQLK 203
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,784,125
Number of Sequences: 37544
Number of extensions: 349349
Number of successful extensions: 1121
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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