Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G23
(907 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 33 0.37
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 32 0.49
Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical pr... 32 0.65
AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical ... 32 0.65
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 31 1.1
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 31 1.5
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 2.0
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 2.0
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 2.0
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 2.0
AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical ... 30 2.6
U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily ass... 29 3.5
U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily ass... 29 3.5
U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily ass... 29 3.5
U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily ass... 29 3.5
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 4.6
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 4.6
Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical p... 29 6.0
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 6.0
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 29 6.0
Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 28 8.0
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 28 8.0
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 28 8.0
Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical p... 28 8.0
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 28 8.0
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 28 8.0
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 28 8.0
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 28 8.0
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 32.7 bits (71), Expect = 0.37
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +1
Query: 112 IDNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELD 282
ID+F KT DKI+++Q++ +A R + + K A E K+ + E ++ +LD
Sbjct: 134 IDDFVKTFTDKIKQKQEEKEAQRQEQIEKWKQASE-KLQQQREELKQQIDAAKQKLD 189
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 32.3 bits (70), Expect = 0.49
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 139 DKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLSI 318
+K++KE+++LKA K ++E + +E KV E AE + E + V A Q S
Sbjct: 896 EKVKKEEERLKAEEEKVKVEKERNKE-KVKAEEERLKAEEEKVKIEKEKVKAEEQKIKSA 954
Query: 319 ADS-DKNRLENAKE 357
+ K R E+AK+
Sbjct: 955 EEERRKERAEDAKK 968
>Z93374-5|CAB07557.1| 935|Caenorhabditis elegans Hypothetical
protein C06C6.7 protein.
Length = 935
Score = 31.9 bits (69), Expect = 0.65
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Frame = +1
Query: 217 TKVHNELSERLAELSRRSG------ELDNVCASLQSCLSIADSDKNRLENAKETYQLVKE 378
T+ H + ++ +L + G +D++ +L++ IAD DK+ LEN K++ + VK
Sbjct: 378 TETHYHMMRQVFDLQKHRGIRLTQNAIDSISNTLETKCLIADMDKSFLENMKQSAKHVKL 437
Query: 379 LTGVRLDFSAPPNLAKGYIKNESRKVLQPFEVDSADSNALWNLIQSVS 522
L + N + N+ K+ + S+D +++ +++S+S
Sbjct: 438 LLRKVQALESIRNAFTSKVINDFNKL--STQTKSSDVSSIRTVLRSLS 483
>AC006665-3|AAF39905.1| 605|Caenorhabditis elegans Hypothetical
protein H27M09.3 protein.
Length = 605
Score = 31.9 bits (69), Expect = 0.65
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 121 FFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGEL-DNVCAS 297
F + + +E+ + +M +L TK+ E K L ER AEL+ +SG+L + + ++
Sbjct: 23 FLRQSNQLVERNMINTEGRKMLAKLLTKMVSEAKGIYALDERRAELA-KSGKLQEKLKSA 81
Query: 298 LQSCLSIADSDKNRLENAKETYQLVKELT 384
Q+ L++ + + E +++ + K+LT
Sbjct: 82 YQTSLTVMEDRLHIAELSRQVQE--KKLT 108
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/118 (18%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Frame = +1
Query: 37 IPXTXIELIIYXWNQKIGVPVLIDN----IDNFFKTLDDKIEKEQQQLKASRMKTELETK 204
+P L++Y Q GVP L+ + +F K L +K + ++ + + E+ +
Sbjct: 133 VPCQEEVLVLYEQLQSSGVPALLRKFERVVGSFHKELSEKKHENERLQRIYASEREMYNR 192
Query: 205 LAQETKVHNELSERLAELSRRSGELDNVCASLQSCLSIADSDKNRLENAKETYQLVKE 378
+E + + L E+ R E D + + + + + N E Q +++
Sbjct: 193 RMEEMESEVDQQLELTEMKARQEERDRLTKEKEEMRQRMSDEMSEMRNNIERLQKMEK 250
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 30.7 bits (66), Expect = 1.5
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +1
Query: 76 NQKIGVPVLIDNIDNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAE 255
N + + L D I K L+D+ +QQQ + E E KL + + + +L +E
Sbjct: 490 NYESTIAQLKDEIQILNKRLEDEALAQQQQKPKDEIVAESEKKLKELKERNKQLVMEKSE 549
Query: 256 LSRRSGELDNVCASLQSCL 312
+ R ELDN+ L L
Sbjct: 550 IQR---ELDNINDHLDQVL 565
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 97 VLIDNIDNFFKTLDDKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSERLAELSRRSG 273
V +D+++ +L +++ K +++ K ++ E LE K E K E+ +LAE R+
Sbjct: 753 VTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVKLQLAEKDRQGV 812
Query: 274 E 276
E
Sbjct: 813 E 813
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 97 VLIDNIDNFFKTLDDKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSERLAELSRRSG 273
V +D+++ +L +++ K +++ K ++ E LE K E K E+ +LAE R+
Sbjct: 753 VTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVKLQLAEKDRQGV 812
Query: 274 E 276
E
Sbjct: 813 E 813
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 97 VLIDNIDNFFKTLDDKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSERLAELSRRSG 273
V +D+++ +L +++ K +++ K ++ E LE K E K E+ +LAE R+
Sbjct: 513 VTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVKLQLAEKDRQGV 572
Query: 274 E 276
E
Sbjct: 573 E 573
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 97 VLIDNIDNFFKTLDDKIEKEQQQLKASRMKTE-LETKLAQETKVHNELSERLAELSRRSG 273
V +D+++ +L +++ K +++ K ++ E LE K E K E+ +LAE R+
Sbjct: 753 VTVDSLNEEISSLKEQLNKSEKERKEELLRMEELEQKNEAEMKEEYEVKLQLAEKDRQGV 812
Query: 274 E 276
E
Sbjct: 813 E 813
>AL117204-9|CAB55124.1| 358|Caenorhabditis elegans Hypothetical
protein Y116A8C.18 protein.
Length = 358
Score = 29.9 bits (64), Expect = 2.6
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +1
Query: 133 LDDKIEKEQQQLKASRMKTELETKLAQETKVHNEL-SERLAELSRRSGELDNVCASLQSC 309
L+ + K +QLK + K E +L + K+H E+ SERL + S + +L + S+++
Sbjct: 178 LEFQKRKSDKQLKDLQSKLERNLELVELNKLHEEVQSERLLK-SEVAEKLAELIKSVKTS 236
Query: 310 LSIADSDKNRLENAKETYQLVKELTGVRLDFS 405
S+ + E+A+ + + V E +D S
Sbjct: 237 NSMLLEKTTQFEDAQGSRENVVEGANDEMDTS 268
>U28941-4|AAM98024.1| 484|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform c protein.
Length = 484
Score = 29.5 bits (63), Expect = 3.5
Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 8/152 (5%)
Frame = +1
Query: 121 FFKTLDDKI-----EKEQQQLKASRMKTELETKLAQ-ETKVHNELSERLAELSRRSGE-L 279
FFK LDDK EKE+ Q + + KL + +V + E EL R + + L
Sbjct: 45 FFKLLDDKNKKESGEKEEPQTSVESVLAKAGDKLHDVKEQVQQHIPESAEELMREADQYL 104
Query: 280 DNVCASLQSCL-SIADSDKNRLENAKETYQLVKELTGVRLDFSAPPNLAKGYIKNESRKV 456
S+Q+ + A+ N+ + + L + R F + ++
Sbjct: 105 KEQAHSVQNNVHQFAEQAANKFPSLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMD 164
Query: 457 LQPFEVDSADSNALWNLIQSVSGDWSDKENKP 552
L P DS + ++ S D E+ P
Sbjct: 165 LSPTSRDSTQFEQIPSIAPEESAFGHDFEHVP 196
>U28941-3|AAM98025.1| 799|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform d protein.
Length = 799
Score = 29.5 bits (63), Expect = 3.5
Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 8/152 (5%)
Frame = +1
Query: 121 FFKTLDDKI-----EKEQQQLKASRMKTELETKLAQ-ETKVHNELSERLAELSRRSGE-L 279
FFK LDDK EKE+ Q + + KL + +V + E EL R + + L
Sbjct: 45 FFKLLDDKNKKESGEKEEPQTSVESVLAKAGDKLHDVKEQVQQHIPESAEELMREADQYL 104
Query: 280 DNVCASLQSCL-SIADSDKNRLENAKETYQLVKELTGVRLDFSAPPNLAKGYIKNESRKV 456
S+Q+ + A+ N+ + + L + R F + ++
Sbjct: 105 KEQAHSVQNNVHQFAEQAANKFPSLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMD 164
Query: 457 LQPFEVDSADSNALWNLIQSVSGDWSDKENKP 552
L P DS + ++ S D E+ P
Sbjct: 165 LSPTSRDSTQFEQIPSIAPEESAFGHDFEHVP 196
>U28941-2|AAC71103.1| 1091|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform a protein.
Length = 1091
Score = 29.5 bits (63), Expect = 3.5
Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 8/152 (5%)
Frame = +1
Query: 121 FFKTLDDKI-----EKEQQQLKASRMKTELETKLAQ-ETKVHNELSERLAELSRRSGE-L 279
FFK LDDK EKE+ Q + + KL + +V + E EL R + + L
Sbjct: 45 FFKLLDDKNKKESGEKEEPQTSVESVLAKAGDKLHDVKEQVQQHIPESAEELMREADQYL 104
Query: 280 DNVCASLQSCL-SIADSDKNRLENAKETYQLVKELTGVRLDFSAPPNLAKGYIKNESRKV 456
S+Q+ + A+ N+ + + L + R F + ++
Sbjct: 105 KEQAHSVQNNVHQFAEQAANKFPSLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMD 164
Query: 457 LQPFEVDSADSNALWNLIQSVSGDWSDKENKP 552
L P DS + ++ S D E+ P
Sbjct: 165 LSPTSRDSTQFEQIPSIAPEESAFGHDFEHVP 196
>U28941-1|AAC71102.1| 1107|Caenorhabditis elegans Temporarily
assigned gene nameprotein 149, isoform b protein.
Length = 1107
Score = 29.5 bits (63), Expect = 3.5
Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 8/152 (5%)
Frame = +1
Query: 121 FFKTLDDKI-----EKEQQQLKASRMKTELETKLAQ-ETKVHNELSERLAELSRRSGE-L 279
FFK LDDK EKE+ Q + + KL + +V + E EL R + + L
Sbjct: 45 FFKLLDDKNKKESGEKEEPQTSVESVLAKAGDKLHDVKEQVQQHIPESAEELMREADQYL 104
Query: 280 DNVCASLQSCL-SIADSDKNRLENAKETYQLVKELTGVRLDFSAPPNLAKGYIKNESRKV 456
S+Q+ + A+ N+ + + L + R F + ++
Sbjct: 105 KEQAHSVQNNVHQFAEQAANKFPSLEVDLNLGHPIDATREKFDTVLSSVNNHLHETKNMD 164
Query: 457 LQPFEVDSADSNALWNLIQSVSGDWSDKENKP 552
L P DS + ++ S D E+ P
Sbjct: 165 LSPTSRDSTQFEQIPSIAPEESAFGHDFEHVP 196
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 148 EKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLSIADS 327
E E++ + K LE KLA +K R E++++ ++ CA L+ D
Sbjct: 916 EVEERMTAMNEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAECADLKKNCQDVDL 975
Query: 328 DKNRLE---NAKE 357
++E NAKE
Sbjct: 976 SLRKVEAEKNAKE 988
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 148 EKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLSIADS 327
E E++ + K LE KLA +K R E++++ ++ CA L+ D
Sbjct: 916 EVEERMTAMNEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAECADLKKNCQDVDL 975
Query: 328 DKNRLE---NAKE 357
++E NAKE
Sbjct: 976 SLRKVEAEKNAKE 988
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 148 EKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLSIADS 327
E E++ + K LE KLA +K R E++++ ++ CA L+ D
Sbjct: 916 EVEERMTAMNEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAECADLKKNCQDVDL 975
Query: 328 DKNRLE---NAKE 357
++E NAKE
Sbjct: 976 SLRKVEAEKNAKE 988
>Z69787-10|CAH65466.1| 398|Caenorhabditis elegans Hypothetical
protein C44C10.11 protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +1
Query: 145 IEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGEL 279
+E +Q+ ++ +MKT TKL + K++ + ++EL+ + L
Sbjct: 281 LELKQKHIEELQMKTTQITKLENDVKLNGNFMDHISELTEENHNL 325
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 157 QQQLKASRMKTELETKLAQETKV---HNELSERLAELSRRSGELDNVCASLQSCLSIADS 327
+ Q RMKTEL L Q T++ + EL ++L E +R L++ + D+
Sbjct: 244 EMQEALERMKTELANSLKQSTEITTRNAELEDQLTEDAREKHAAQESIVRLKNQICELDA 303
Query: 328 DKNRLENAKETYQ 366
+ E T++
Sbjct: 304 QRTDQETRITTFE 316
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +1
Query: 178 RMKTELETKLAQETKVHNELSER-----LAELSRRSGELDNVCASLQSCLSIADSDKNRL 342
R E K + T +H +L +R L +++ + ELD + ++S D++KN
Sbjct: 309 RAAIEFLMKENEATTIHMKLEQRRRQRYLDKIAPKQAELDKMKEEMKSIAETLDTNKNEY 368
Query: 343 ENAKETYQLVKE 378
+ ++E +++ E
Sbjct: 369 KQSEEAQKVMIE 380
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 157 QQQLKASRMKTELETKLAQETKV---HNELSERLAELSRRSGELDNVCASLQSCLSIADS 327
+ Q RMKTEL L Q T++ + EL ++L E +R L++ + D+
Sbjct: 244 EMQEALERMKTELANSLKQSTEITTRNAELEDQLTEDAREKHAAQESIVRLKNQICELDA 303
Query: 328 DKNRLENAKETYQ 366
+ E T++
Sbjct: 304 QRTDQETRITTFE 316
>Z78537-4|CAB01721.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 427 GYIKNESRKVLQPFEVDSADSNALWNLIQSVSGDWSDKENKP 552
G + N RKV++ V A SN+L NL+ S SG +D + P
Sbjct: 225 GLLSNSIRKVIKETGVSDALSNSLPNLLGSGSG--ADSSSAP 264
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.3 bits (60), Expect = 8.0
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +1
Query: 127 KTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQS 306
++L +E+ + QL R + +LE + ++ N ++ ++ +S ++ + CA LQS
Sbjct: 372 QSLKYDLERLENQL---RSELDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQS 428
Query: 307 CLSIADSDKNRLENAKETYQ-----LVKELTGVRLDFSAPPNLAKG---YIKNESRKVLQ 462
L A ++E +T Q L KE+ ++ N G +K E
Sbjct: 429 NLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKS 488
Query: 463 PFEVDSADSNAL 498
++ D NAL
Sbjct: 489 LADLPLLDENAL 500
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.3 bits (60), Expect = 8.0
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +1
Query: 127 KTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQS 306
++L +E+ + QL R + +LE + ++ N ++ ++ +S ++ + CA LQS
Sbjct: 358 QSLKYDLERLENQL---RSELDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQS 414
Query: 307 CLSIADSDKNRLENAKETYQ-----LVKELTGVRLDFSAPPNLAKG---YIKNESRKVLQ 462
L A ++E +T Q L KE+ ++ N G +K E
Sbjct: 415 NLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKS 474
Query: 463 PFEVDSADSNAL 498
++ D NAL
Sbjct: 475 LADLPLLDENAL 486
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.3 bits (60), Expect = 8.0
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +1
Query: 127 KTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQS 306
++L +E+ + QL R + +LE + ++ N ++ ++ +S ++ + CA LQS
Sbjct: 358 QSLKYDLERLENQL---RSELDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQS 414
Query: 307 CLSIADSDKNRLENAKETYQ-----LVKELTGVRLDFSAPPNLAKG---YIKNESRKVLQ 462
L A ++E +T Q L KE+ ++ N G +K E
Sbjct: 415 NLRTAQEAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKS 474
Query: 463 PFEVDSADSNAL 498
++ D NAL
Sbjct: 475 LADLPLLDENAL 486
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 28.3 bits (60), Expect = 8.0
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Frame = +1
Query: 139 DKIEKEQQQL-KASRMKTELET---KL-AQETKVHN---ELSERLAELSRRSGELDNVCA 294
DKIEK Q+QL KA+ TE ++ KL A T + + +L E + + G++D + +
Sbjct: 96 DKIEKLQEQLEKANEKYTEADSDNNKLKASLTFLKDSEVKLQEETRTVDKLKGDMDILSS 155
Query: 295 SLQSCLSIADSDKNRLE 345
LQS L ++ ++ L+
Sbjct: 156 VLQSVLDSHEAHRDELK 172
>Z68014-14|CAA92030.1| 569|Caenorhabditis elegans Hypothetical
protein W04G3.8 protein.
Length = 569
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 427 GYIKNESRKVLQPFEVDSADSNALWNLIQSVSGDWSDKENKP 552
G + N RKV++ V A SN+L NL+ S SG +D + P
Sbjct: 225 GLLSNSIRKVIKETGVSDALSNSLPNLLGSGSG--ADSSSAP 264
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 229 NELSERLAELSRRSGELDNVCASLQ 303
N+L E L E++R+ E DNV ASL+
Sbjct: 105 NKLKEELEEVTRQLTESDNVIASLE 129
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 229 NELSERLAELSRRSGELDNVCASLQ 303
N+L E L E++R+ E DNV ASL+
Sbjct: 234 NKLKEELEEVTRQLTESDNVIASLE 258
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 8.0
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +1
Query: 142 KIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDNVCASLQSCLSIA 321
K E + + + S +++E E+ K N+L E +L+ DN+ L+ L+
Sbjct: 1261 KRELDVYKSQLSAVESEKESLQTANRKQSNQLQETTRQLNSAQKNADNLALRLKKALADC 1320
Query: 322 DSDKNRLENA 351
D K + E +
Sbjct: 1321 DEWKKKHEES 1330
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 28.3 bits (60), Expect = 8.0
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +1
Query: 106 DNIDNFFKTLDDKIEKEQQQLKASRMKTELETKLAQETKVHNELSERLAELSRRSGELDN 285
DN+++ DKI ++ L+ + +++L L QE V ++ +L+ G DN
Sbjct: 2438 DNLNSLPAEESDKIREKINDLRRRKQESDLAEALLQELSVIYDMPTSTIDLNMLQGIEDN 2497
Query: 286 VCASLQSCLSIADSDKNR 339
+ + L +SDK R
Sbjct: 2498 L-----NSLPAEESDKIR 2510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,888,460
Number of Sequences: 27780
Number of extensions: 310461
Number of successful extensions: 1127
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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