Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G22
(965 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0369 - 9505330-9505652,9507262-9507532,9507649-9507690,950... 36 0.048
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 34 0.15
10_01_0129 + 1535823-1537196 32 0.60
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.0
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.0
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 31 1.8
03_01_0023 + 198414-198968 31 1.8
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 30 3.2
05_01_0142 - 940421-940701,941262-941574 30 3.2
08_01_0532 - 4611650-4612706,4613405-4613757 29 5.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.5
07_03_1136 + 24218601-24218734,24218769-24219906 29 5.5
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 29 5.5
01_05_0291 - 20515206-20516262,20516961-20517313 29 5.5
11_06_0610 - 25449085-25453284 29 7.3
11_01_0242 - 1862106-1862210,1862302-1862320,1863082-1863257,186... 29 7.3
06_03_0757 + 24267599-24268882 29 7.3
01_01_0070 - 542603-542686,542803-543441 29 7.3
11_01_0066 - 536281-537196,537397-537452 28 9.7
10_08_0218 - 15967064-15967906 28 9.7
03_05_0292 + 22846273-22846377,22847161-22847823 28 9.7
>02_02_0369 -
9505330-9505652,9507262-9507532,9507649-9507690,
9508416-9508458,9508853-9508860
Length = 228
Score = 35.9 bits (79), Expect = 0.048
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +1
Query: 751 GXTPAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXPG 909
G A P P+ P G P G PPG P P PP G PG
Sbjct: 122 GYPGAPNVPTMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPPTLPPPTSGAPG 174
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 34.3 bits (75), Expect = 0.15
Identities = 18/44 (40%), Positives = 19/44 (43%)
Frame = -1
Query: 890 GGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAG 759
GG + GG PGG PGG P G P G G G P G
Sbjct: 524 GGASPRGGFPGGMPGGGFPGG-MPGGGFPGGMPGGGFPGGMPGG 566
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -1
Query: 866 SGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXP 750
SG P G PGG P G P G G G P G P
Sbjct: 523 SGGASPRGGFPGGM-PGGGFPGGMPGGGFPGGMPGGGFP 560
>10_01_0129 + 1535823-1537196
Length = 457
Score = 32.3 bits (70), Expect = 0.60
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -1
Query: 896 RXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXP 750
R G GG G GG P G P G SP + R R P+G P
Sbjct: 4 RSGRRLAAGGGGG---GGGAPRGSPPGGGSPLNSSRRSSRRPRPSGSSP 49
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.5 bits (68), Expect = 1.0
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +1
Query: 748 GGXTPAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPP-XXAXPPXRGXP 906
G P P P P G P PPG G P PP P RG P
Sbjct: 346 GSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPP 399
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/47 (36%), Positives = 18/47 (38%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRG 900
P G P P P P G PP PPG PP PP +G
Sbjct: 341 PKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP---PPPPKG 384
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Frame = +1
Query: 763 AGXXPRXPRXACPXGEXPXGXXPPGVXPP--GRXXPEPPXXAXPPXRGXPGXR 915
A P P A P P G PP PP G P PP PP PG +
Sbjct: 324 AAPPPPPPPKAAPPPPPPKGPPPP---PPAKGPPPPPPPKGPSPPPPPPPGGK 373
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
P P P A P P PP PP + P PP PP P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPP--PPPPKGPPPPPPAKGPPPPPPP 359
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = +1
Query: 745 GGGXTPAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXPG 909
GG TP G P P P G P PG PP P PP G PG
Sbjct: 220 GGLRTPYGGPPA-PSQQVPFGGAPQW---PGTQPPPFGAQAAPSSQPPPFMGVPG 270
Score = 29.1 bits (62), Expect = 5.5
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +1
Query: 748 GGXTPAGXXPRXPRXACPXGEX-PXGXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
GG P R P+ P P PP PP P P PP G P
Sbjct: 47 GGNGPVPSSIRAPQAPPPGARPFPGSPPPPSQPPPPFARPAAPVQQQPPPFGGP 100
>03_01_0023 + 198414-198968
Length = 184
Score = 30.7 bits (66), Expect = 1.8
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = -1
Query: 908 PGXPRXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAG 759
PG GG GG G GG + GG G S G + G G +G
Sbjct: 35 PGGGGGGGGGGGGGGGGRGGGGGSGGGSGGGGGSGGGGSGGGGSGGGGSG 84
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 29.9 bits (64), Expect = 3.2
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEP-PXXAXPPXRGXP 906
P PR A P P PPG PP P P P A PP P
Sbjct: 216 PVVASPRDSPIASPSRPEPPVASPPGPEPPVASPPVPEPQVASPPVLEPP 265
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 29.9 bits (64), Expect = 3.2
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 799 PXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
P G P PPG PP PP A PP G P
Sbjct: 43 PPGAYPP---PPGAYPPPPGAYPPPPGAYPPQHGYP 75
>08_01_0532 - 4611650-4612706,4613405-4613757
Length = 469
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 539 GGRGXRXXPPPR--XEXGGPXXXGEPPG 616
GGRG PPPR GGP PPG
Sbjct: 45 GGRGVGLAPPPRSLGRGGGPAVAAIPPG 72
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 775 PRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXR 897
P P + P PP PP P PP PP R
Sbjct: 94 PPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPR 134
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPP 891
P G P P P G P G PP + P PP A PP
Sbjct: 14 PQGGFPPQPPPMNPYGPPPPQQPAYGHMPPPQGAP-PPFLAPPP 56
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 5.5
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -1
Query: 905 GXPRXGGXAXX--GGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAG 759
G P GG A GG G PGG GG P P G R P G
Sbjct: 89 GLPPGGGGAPGPLGGGGARPPGGG--GGGGPPSLPPGAGGGGGARPPAPGG 137
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 793 ACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPP 891
A P P PP PP P+PP A PP
Sbjct: 1921 AKPKQPPPHAPPPPPPPPPVEGKPKPPPHAPPP 1953
>01_05_0291 - 20515206-20516262,20516961-20517313
Length = 469
Score = 29.1 bits (62), Expect = 5.5
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 539 GGRGXRXXPPPR--XEXGGPXXXGEPPG 616
GGRG PPPR GGP PPG
Sbjct: 45 GGRGVGLAPPPRSLGRGGGPAVAAIPPG 72
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXP--PGRXXPEPPXXAXPPXRGXP 906
P G P P+ P GE P P P P PP P + P
Sbjct: 569 PEGHTPSPPKSGPPAGESPPTPESKASPPPTPEEYTPSPPKSTPPAEKSPP 619
>11_01_0242 -
1862106-1862210,1862302-1862320,1863082-1863257,
1863359-1863405,1864443-1865022
Length = 308
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +2
Query: 539 GGRGXRXXPPPRXEXGGPXXXGEPPGXXRGPXGGKGAXXPKXXPPXXAP 685
GG G PP G G PP R G G P P AP
Sbjct: 57 GGGGGYGAPPSTQPYGSGGGYGAPPSTQRPQSYGGGYGAPPSSQPYGAP 105
>06_03_0757 + 24267599-24268882
Length = 427
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 890 GGXAXXGGSGXXRPGGXTPGGXXPXGXSPXG 798
GG GG+ PGG T GG P G + G
Sbjct: 253 GGSGSGGGARQTFPGGGTGGGGFPAGQARTG 283
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.7 bits (61), Expect = 7.3
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPG-RXXPEPPXXAXPPXRGXP 906
P P P+ A P P PP V PP P P A PP P
Sbjct: 79 PVTPPPPTPKKAPPPPVTPPPVTPPPVTPPPVSPPPATPPPALPPSTPPP 128
>11_01_0066 - 536281-537196,537397-537452
Length = 323
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 3/42 (7%)
Frame = +1
Query: 775 PRXPRXACPXGEXPXGXXPP---GVXPPGRXXPEPPXXAXPP 891
P P A P P PP PP P PP A PP
Sbjct: 198 PTPPTIARPPRPLPPASPPPPSIATPPPSPASPPPPSTATPP 239
>10_08_0218 - 15967064-15967906
Length = 280
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = -1
Query: 905 GXPRXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAG 759
G + GG GSG + G PGG G G G G +G
Sbjct: 199 GGGQYGGSGHGSGSGYGQAGSYGPGGAYAQGGGQGGGGGGGQYGGSGSG 247
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +2
Query: 260 GXXENGGXAXGRXXGXXWRXXGKXGGXGRXGXPXXXXKXGXXXRGG 397
G GG GR G R G G G G + G RGG
Sbjct: 44 GGSHGGGGGRGRGGGGGGRGDGARDGGGARGGGGRGARGGGGARGG 89
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,253,693
Number of Sequences: 37544
Number of extensions: 256078
Number of successful extensions: 1908
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1767
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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