Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_G22
         (965 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.84 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   3.4  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   7.8  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -1

Query: 908 PGXPRXGGXAXXGGSGXXRPGGXTPGG 828
           PG P   G A   G G  RPG   P G
Sbjct: 391 PGQPGIAGPAGAPGGGEGRPGAPGPKG 417


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 1.9
 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
 Frame = -1

Query: 881 AXXGGSGXXRPGGX--TPGGXXPXGXSPXGQAXRGXR 777
           A  GGSG   PGG   + GG  P G    G   R  R
Sbjct: 202 AGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHR 238


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = +1

Query: 814 PXGXXPPGVXPPGRXXPEPPXXAXPPXRGXPGXR 915
           P    PP   PP    P P   A  P  G  G R
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSR 610


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 832 PGVXPPGRXXPEPPXXAXPPXRGXP 906
           PG+ PPG     PP    PP  G P
Sbjct: 183 PGM-PPGPQMMRPPGNVGPPRTGTP 206


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 757 TPAGXXPRXPRXACPXGEXPXGXXPPGVXPPGR 855
           TP+   P   + A P GE P    PP   P GR
Sbjct: 431 TPSVPRPLPSQEASPSGEQPGRMGPP--PPTGR 461


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,204
Number of Sequences: 2352
Number of extensions: 5350
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105241344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)