Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G22
(965 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 32 0.53
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 0.93
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 31 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.2
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.6
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.6
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.6
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.6
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.6
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 2.1
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 30 2.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.8
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 27 3.2
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 5.0
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 5.0
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 5.0
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 5.0
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 6.5
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 28 8.7
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 28 8.7
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 8.7
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 28 8.7
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = +1
Query: 745 GGGXTPAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXP--PXRGXPG 909
G P G P PR P P PG PPG+ P P P P G PG
Sbjct: 255 GPADIPQG--PGMPRAFPPGASAPVAPGMPGAFPPGQGGPGMPGSFPPGAPGPGGPG 309
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/54 (38%), Positives = 22/54 (40%)
Frame = -1
Query: 908 PGXPRXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPP 747
PG P GG G G PG PGG P G G G +G P G PP
Sbjct: 300 PGAPGPGG---PGMPGSFAPGAPGPGG--PGGYPSGGPGMPGMQGGYPGG--PP 346
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +1
Query: 784 PRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXPG 909
P + P G PPG PG PP P G PG
Sbjct: 271 PGASAPVAPGMPGAFPPGQGGPGMPGSFPPGAPGPGGPGMPG 312
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 31.5 bits (68), Expect = 0.93
Identities = 22/55 (40%), Positives = 22/55 (40%), Gaps = 6/55 (10%)
Frame = +2
Query: 539 GGRGXRXXPPPRXEXGGPXXXGEPPGXXRG----PXGGKGA--XXPKXXPPXXAP 685
GG G PPP G P G P G G P GG GA P PP AP
Sbjct: 404 GGPGGYGPPPPGG-PGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAP 457
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = -1
Query: 908 PGXPRXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXP 750
PG P G GG G PG P P G P G G P G P
Sbjct: 403 PGGPGGYGPPPPGGPGA--PGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Frame = +1
Query: 745 GGGXTPAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPE----PPXXAXPP-XRGXPG 909
GG P P P P P G PP PG P PP A PP G PG
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPG 466
Query: 910 XRXXA 924
A
Sbjct: 467 GNPFA 471
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -1
Query: 908 PGXPRXGGXAXXGG-SGXXRPGGX-TPGGXXPXGXSPXGQA 792
PG P GG GG G PGG TPGG G P G A
Sbjct: 118 PGTP--GGPGNPGGLGGPGNPGGPGTPGGPGTPGGQPHGTA 156
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
PA P PR P P G PP PP P PP PP P
Sbjct: 259 PAAGSPPPPRTGSPP-PPPTGSPPP---PPAGGSPPPPRAGSPPPPPPP 303
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 775 PRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXP 888
PR PR + P G P G P G P G P P
Sbjct: 404 PRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP 441
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
PA P PR P P G PP PP P PP PP P
Sbjct: 280 PAAGSPPPPRTGSPP-PPPTGSPPP---PPAGGSPPPPRAGSPPPPPPP 324
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 775 PRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXP 888
PR PR + P G P G P G P G P P
Sbjct: 425 PRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP 462
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
PA P PR P P G PP PP P PP PP P
Sbjct: 265 PAAGSPPPPRTGSPP-PPPTGSPPP---PPAGGSPPPPRAGSPPPPPPP 309
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 775 PRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXP 888
PR PR + P G P G P G P G P P
Sbjct: 410 PRGPRRSPPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP 447
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = -1
Query: 908 PGXPRXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPPP 744
PG P G + GG G P G PG P G G G PAG PP
Sbjct: 203 PGGPGEPGASEQGGPGEPGPAGP-PGPAGPAG----NDGAPGTGGPGPAGPKGPP 252
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = -1
Query: 908 PGXPRXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPPP 744
PG P G + GG G P G PG P G G G PAG PP
Sbjct: 203 PGGPGEPGASEQGGPGEPGPAGP-PGPAGPAG----NDGAPGTGGPGPAGPKGPP 252
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVX-PPGRXXPEPPXXAXPPXRGXPG 909
P P P P E P PPG PPG PP PP R PG
Sbjct: 221 PKPSEPPSPGPVDPSDE-PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPG 270
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 799 PXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXPG 909
P P PPG PPG PP PP R PG
Sbjct: 247 PGPPGPPTRRPPG--PPGPPTRRPPGPPGPPTRRPPG 281
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 542 GRGXRXXPPPRXEXGGPXXXGEPPGXXRGPXGGKGAXXPK 661
G G + PP GGP PG GP GG G PK
Sbjct: 185 GHGGQGGPPGHGGMGGPPPGQGGPGGPGGP-GGPGGMLPK 223
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/40 (40%), Positives = 17/40 (42%)
Frame = +2
Query: 542 GRGXRXXPPPRXEXGGPXXXGEPPGXXRGPXGGKGAXXPK 661
G G + PP GGP PG GP GG G PK
Sbjct: 465 GHGGQGGPPGHGGMGGPPPGQGGPGGPGGP-GGPGGMLPK 503
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = -1
Query: 908 PGXPRXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPPP 744
PG P G + GG G P G PG P G G G PAG PP
Sbjct: 203 PGGPGEPGASEQGGPGEPGPAGP-PGPAGPAG----NDGAPGTGGPGPAGPKGPP 252
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = -1
Query: 908 PGXPRXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPPP 744
PG P G + GG G P G PG P G G G PAG PP
Sbjct: 203 PGGPGEPGASEQGGPGEPGPAGP-PGPAGPAG----NDGAPGTGGPGPAGPKGPP 252
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 851 PGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPPP 744
P G +P G P G SP G + G P+ P P
Sbjct: 1009 PNGPSPNGPSPNGPSPNGPSPNGPTPNWPSPNGPSP 1044
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 851 PGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPPP 744
P G +P G P G SP G + G P P P
Sbjct: 1004 PSGPSPNGPSPNGPSPNGPSPNGPSPNGPTPNWPSP 1039
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 684 GAXXGGXXFGXXAPLPPXGPRXXPGGSPXXWGP 586
G G FG AP PP GP GG GP
Sbjct: 501 GGFGSGSPFGGAAPSPPSGPDPDFGGDTAAAGP 533
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +1
Query: 748 GGXTPAGXXPRXPRXACPXGEXPX-GXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
GG P P P P G P G PP PPG P PP +G P
Sbjct: 733 GGLPPITGGPPPPPP--PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 586 PXFXPXGGXXPXPPPPXXGG 527
P P GG P PPPP GG
Sbjct: 760 PPPPPPGGCPPPPPPPPPGG 779
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRX--XPEPPXXAXPPXRGXP 906
P P P P P PPG PP P PP PP G P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +1
Query: 748 GGXTPAGXXPRXPRXACPXGEXPX-GXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
GG P P P P G P G PP PPG P PP +G P
Sbjct: 733 GGLPPITGGPPPPPP--PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 586 PXFXPXGGXXPXPPPPXXGG 527
P P GG P PPPP GG
Sbjct: 760 PPPPPPGGCPPPPPPPPPGG 779
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRX--XPEPPXXAXPPXRGXP 906
P P P P P PPG PP P PP PP G P
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 758
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.8
Identities = 19/54 (35%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +1
Query: 748 GGXTPAGXXPRXPRXACPXGEXPX-GXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
GG P P P P G P G PP PPG P PP +G P
Sbjct: 316 GGLPPITGGPPPPPP--PGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 586 PXFXPXGGXXPXPPPPXXGG 527
P P GG P PPPP GG
Sbjct: 343 PPPPPPGGCPPPPPPPPPGG 362
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = +1
Query: 760 PAGXXPRXPRXACPXGEXPXGXXPPGVXPPGRX--XPEPPXXAXPPXRGXP 906
P P P P P PPG PP P PP PP G P
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP 341
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 27.1 bits (57), Expect(2) = 3.2
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2
Query: 655 GXGPFAALWAPGXSRXFPXXXGTPXFXPXGGXXPXPPPP 539
G P ++A G P G P P G P PPPP
Sbjct: 82 GIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 21.0 bits (42), Expect(2) = 3.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 793 PXXGXGGXPPP 761
P G GG PPP
Sbjct: 76 PPPGPGGIPPP 86
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXX-PEPPXXAXPPXRGXPG 909
G P+G P P A P G P P G P G P P A PP G PG
Sbjct: 234 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA-PPSGGPPG 288
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXX-PEPPXXAXPPXRGXPG 909
G P+G P P A P G P P G P G P P A PP G PG
Sbjct: 249 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA-PPSGGPPG 303
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXX-PEPPXXAXPPXRGXPG 909
G P+G P P A P G P P G P G P P A PP G PG
Sbjct: 294 GAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGA-PPSGGPPG 348
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXX-PEPPXXAXPPXRGXPG 909
G P+G P P A P G P P G P G P P A PP G PG
Sbjct: 324 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA-PPSGGPPG 378
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXX-PEPPXXAXPPXRGXPG 909
G P+G P P A P G P P G P G P P A PP G PG
Sbjct: 339 GAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA-PPSGGPPG 393
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXX-PEPPXXAXPPXRGXPG 909
G P+G P P A P G P P G P G P P A PP G PG
Sbjct: 354 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGA-PPSGGPPG 408
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXX-PEPPXXAXPPXRGXPG 909
G P+G P P A P G P P G P G P P A PP G PG
Sbjct: 444 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGA-PPSGGPPG 498
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +1
Query: 775 PRXPRXACPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXP 906
P PR P G+ P P + P P PP + PP R P
Sbjct: 61 PPAPR---PSGQPPGPQGPSDLPGPSGAPPGPPHPSGPPHRPHP 101
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/82 (26%), Positives = 23/82 (28%), Gaps = 2/82 (2%)
Frame = -1
Query: 905 GXPRXGGXAXXGGSGXXRPGGXTPGGXXPXGXSPXG--QAXRGXRGXXPAGVXPPPXXXX 732
G P GG P G PG P G P G G G P+G P P
Sbjct: 144 GAPPSGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPS 203
Query: 731 XXXXXXXXXXGXPXXXAPXXGG 666
AP GG
Sbjct: 204 EAPPSGGPTGPFDPSGAPPSGG 225
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXXPEP--PXXAXPPXRGXPG 909
G P+G P P A P G P G P PP P P P A PP G PG
Sbjct: 144 GAPPSGGPPGPFDPSGAPPSG-GPPGLFDPSGAPPSGGPPGPFGPSGA-PPSGGPPG 198
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXXPEP--PXXAXPPXRGXPG 909
G P+G P P A P G P G P PP P P P A PP G PG
Sbjct: 189 GAPPSGGPPGPFNPSEAPPSG-GPTGPFDPSGAPPSGGPPGPFNPSGA-PPSGGPPG 243
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPP-GRXXPEPPXXAXPPXRGXPG 909
G P+G P P A P G P P G P G P P A PP G PG
Sbjct: 279 GAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSGA-PPSGGPPG 333
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXXPEP--PXXAXPPXRGXPG 909
G P+G P P A P G P G P PP P P P A PP G PG
Sbjct: 369 GAPPSGGPPGPFDPSGAPPSG-GPPGPFDPSGAPPSGGPPGPFNPSGA-PPSGGPPG 423
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXXPEP--PXXAXPPXRGXPG 909
G P+G P P A P G P P G PP P P P A PP G PG
Sbjct: 384 GAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA-PPSGGPPGPFNPSGA-PPSGGPPG 438
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXXPEP--PXXAXPPXRGXPG 909
G P+G P P A P G P P G PP P P P A PP G PG
Sbjct: 399 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA-PPSGGPPGPFNPSGA-PPSGGPPG 453
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXXPEP--PXXAXPPXRGXPG 909
G P+G P P A P G P P G PP P P P A PP G PG
Sbjct: 414 GAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGA-PPSGGPPGPFNPSGA-PPSGGPPG 468
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Frame = +1
Query: 751 GXTPAGXXPRX--PRXACPXGEXPXGXXPPGVXPPGRXXPEP--PXXAXPPXRGXPG 909
G P+G P P A P G P G P PP P P P A PP G PG
Sbjct: 459 GAPPSGGPPGPFNPSGAPPSG-GPPGPFDPSGAPPSGGPPGPFNPSGA-PPSGGPPG 513
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 805 GEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRG 900
G P G PP PP P PP PP G
Sbjct: 81 GMPPPGMGPPPFMPPPIGMPPPPLGMPPPHIG 112
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 805 GEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRG 900
G P G PP PP P PP PP G
Sbjct: 104 GMPPPGMGPPPFMPPPIGMPPPPLGMPPPHIG 135
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 805 GEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRG 900
G P G PP PP P PP PP G
Sbjct: 354 GMPPPGMGPPPFMPPPIGMPPPPLGMPPPHIG 385
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = -1
Query: 908 PGXPRXGGXAXXGGS-GXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPPP 744
PG P G A G+ PG P G P P G A G G PAG PP
Sbjct: 151 PGAPGNDGEAGSPGTRSISSPGPAGPAGP-PGPPGPDG-APGGGSGPGPAGPAGPP 204
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 890 GGXAXXGGSGXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPPP 744
GG GG G GG GG G G G G A PPP
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPP 116
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = -1
Query: 908 PGXPRXGGXAXXGGS-GXXRPGGXTPGGXXPXGXSPXGQAXRGXRGXXPAGVXPPP 744
PG P G A G+ PG P G P P G A G G PAG PP
Sbjct: 151 PGAPGNDGEAGSPGTRSISSPGPAGPAGP-PGPPGPDG-APGGGSGPGPAGPAGPP 204
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 539 GGRGXRXXPPPRXEXGGPXXXGEP-PGXXRGPXGGKGAXXPK 661
G G P P+ G P GEP P GP G G P+
Sbjct: 147 GPAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGGPQ 188
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +1
Query: 766 GXXPRXPRXACPXGEXPXGXXPPGVXPPG 852
G P P P G P G PPG+ PPG
Sbjct: 573 GGQPGHP-GMMPPGMMPPGMMPPGMMPPG 600
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +1
Query: 805 GEXPXGXXPPGVXPPGRXXP--EPPXXAXPP 891
G P G PPG+ PPG P P PP
Sbjct: 580 GMMPPGMMPPGMMPPGMMPPGMHPGMAGMPP 610
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 796 CPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXPGXRXXA 924
CP G P PPG P +P A RG PG R A
Sbjct: 134 CPAGA-PGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPA 175
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 796 CPXGEXPXGXXPPGVXPPGRXXPEPPXXAXPPXRGXPGXRXXA 924
CP G P PPG P +P A RG PG R A
Sbjct: 134 CPAGA-PGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPA 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,791,789
Number of Sequences: 27780
Number of extensions: 184551
Number of successful extensions: 1734
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1503
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2500474882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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