Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G19
(860 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 132 8e-30
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 122 9e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 70 9e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 60 5e-08
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 55 3e-06
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 46 0.001
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.035
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.081
UniRef50_Q62G91 Cluster: Putative uncharacterized protein; n=1; ... 38 0.43
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 37 0.75
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 36 1.00
UniRef50_A5P1E9 Cluster: Mandelate racemase/muconate lactonizing... 35 2.3
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 35 3.0
UniRef50_Q3W8D6 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 34 4.0
UniRef50_Q4SE53 Cluster: Chromosome undetermined SCAF14625, whol... 34 5.3
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.3
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.3
UniRef50_Q4RVZ0 Cluster: Chromosome 9 SCAF14991, whole genome sh... 33 7.0
UniRef50_Q4WI82 Cluster: Protein-tyrosine phosphatase, putative;... 33 7.0
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.3
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 132 bits (320), Expect = 8e-30
Identities = 62/71 (87%), Positives = 63/71 (88%)
Frame = +2
Query: 482 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 661
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 662 CRLPDTCPPFS 694
CRLPDTCPPFS
Sbjct: 62 CRLPDTCPPFS 72
Score = 72.9 bits (171), Expect = 9e-12
Identities = 34/41 (82%), Positives = 35/41 (85%), Gaps = 2/41 (4%)
Frame = +3
Query: 672 RIPVRLSP--LREAWRFLIAHAVGISVRCRSFAPSWAVCTN 788
R+P P LREAWRFLIAHAVGISVRCRSFAPSWAVCTN
Sbjct: 63 RLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTN 103
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 122 bits (295), Expect = 9e-27
Identities = 72/120 (60%), Positives = 77/120 (64%)
Frame = +2
Query: 314 RGEAVCVLGALPLPRSLTRCAWSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 493
R +C G +PLPRSLTR A SFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 494 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 673
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +2
Query: 500 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 661
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 69.7 bits (163), Expect = 9e-11
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = -1
Query: 788 VXAHSPAWSERPTPN*DTYSVSYEKAPRFPKGRKADRYPVSG-RVGTGERTRE-LPGGNA 615
V A+SPAWSERP P+ DT SVSYEKAPRFPKG+KA++ VSG R G R E G +
Sbjct: 28 VRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQ--VSGKRQGRNRRAHEGAAGEKS 85
Query: 614 WYLYSPVG 591
SPVG
Sbjct: 86 PASLSPVG 93
Score = 54.4 bits (125), Expect = 4e-06
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = -3
Query: 702 PEGEKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 574
P+G+K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 57 PKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -2
Query: 490 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 377
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 60.5 bits (140), Expect = 5e-08
Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Frame = +3
Query: 603 IKIPGVSPWKLPRALSCSDPAAYRIPVRLSPLREAWRFLIAHAV--GISVRCRSFAPSWA 776
+KI VS LP ALSCS+PA RIPV P A ++H+ GIS RCRSFAPSWA
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWA 89
Query: 777 VCTN 788
V N
Sbjct: 90 VSKN 93
Score = 39.5 bits (88), Expect = 0.11
Identities = 24/51 (47%), Positives = 25/51 (49%)
Frame = +2
Query: 575 VRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSPSGSVALSHSS 727
VR GETRQD K P P PPFS +GSVALSHSS
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSS 73
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +2
Query: 389 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 562
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 563 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 661
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 54.8 bits (126), Expect = 3e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 290 CINESANARGEAVCVLGALPLPRSLTRCAWSFGCGERYQL-TQRR*YGYPQNQGITQ 457
CI + A AR EAV VL ALPL RS TRC S GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +1
Query: 406 AHSKAVIRLSTESGDNAGKNM 468
AHSKAVIRLSTESGDNAGKNM
Sbjct: 39 AHSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 92 DPDMIRYIDEFGQTTTRMQ 148
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 44.0 bits (99), Expect = 0.005
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 640 VRSPVPTLPLTGYLSAFLPFG 702
+RSPVPTLPLTGYLSAFLP G
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSG 21
Score = 44.0 bits (99), Expect = 0.005
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 689 FSPSGSVALSHSSRCRYLSSV 751
F PSGSVALSHSSRCRYLSSV
Sbjct: 17 FLPSGSVALSHSSRCRYLSSV 37
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.1 bits (92), Expect = 0.035
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 216 INKLTTTIAFILCFRFRGEVWEVFSALMNRPTRGERRFAYW 338
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.081
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -3
Query: 360 ERGSGRAPNTQTASPRALADSLMQ 289
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q62G91 Cluster: Putative uncharacterized protein; n=1;
Burkholderia mallei|Rep: Putative uncharacterized
protein - Burkholderia mallei (Pseudomonas mallei)
Length = 105
Score = 37.5 bits (83), Expect = 0.43
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = -2
Query: 712 RHASRRGERRTGIR*AAGSEQESARGSFQGETPGIFIVLSG 590
R A RGERR+ AAGS + ARG+ +GE PG+ L G
Sbjct: 9 RRAGERGERRSAAASAAGSGRRGARGA-RGEAPGLAARLKG 48
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 36.7 bits (81), Expect = 0.75
Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = -2
Query: 844 GXDSDDXTG*GAXVGXNGGXVHTAQL-GANDLHRTEIPTA*AMRKRHASRRGERRTGIR* 668
G S + G+ GG +L G RT P++ ++R ER G+
Sbjct: 524 GGSSSGSSSGGSGTWSRGGPPKKEELVGGKKKGRTWGPSSTLQKERVGGE--ERLKGL-- 579
Query: 667 AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 488
GS+Q S+ G++P + GFA+ + +F +A GG + +P + P Y S P
Sbjct: 580 GEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 36.3 bits (80), Expect = 1.00
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1
Query: 788 VXAHSPAWSERPTPN 744
V AHSPAWSERPTPN
Sbjct: 28 VRAHSPAWSERPTPN 42
>UniRef50_A5P1E9 Cluster: Mandelate racemase/muconate lactonizing
enzyme, C-terminal domain protein; n=1; Methylobacterium
sp. 4-46|Rep: Mandelate racemase/muconate lactonizing
enzyme, C-terminal domain protein - Methylobacterium sp.
4-46
Length = 296
Score = 35.1 bits (77), Expect = 2.3
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -2
Query: 718 RKRHASRRGERRTGIR*AAGSEQESARGSFQGETPGIFIVLSGFATSDLSVDFC-DARQG 542
R RH SRRG G+R A + R + G P I + LSG T D ++ FC +
Sbjct: 77 RLRHPSRRGTTDDGLRRRAVAAVAGLRAAL-GPGPKIMLDLSGGLTPDETIRFCREVEAF 135
Query: 541 GGAYGKTPATRPF 503
AY + PA PF
Sbjct: 136 DIAYVEEPAD-PF 147
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 34.7 bits (76), Expect = 3.0
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 788 VXAHSPAWSERPTPN*DT 735
V A+SPAWSERPTP+ DT
Sbjct: 28 VLAYSPAWSERPTPSRDT 45
>UniRef50_Q3W8D6 Cluster: DEAD/DEAH box helicase:Helicase, C-terminal;
n=1; Frankia sp. EAN1pec|Rep: DEAD/DEAH box
helicase:Helicase, C-terminal - Frankia sp. EAN1pec
Length = 1969
Score = 34.3 bits (75), Expect = 4.0
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 719 EKAPRFPKGRKADRYPVSGRVGTGERTRE-LPGGNAWY 609
E P FP GR A +P +GR T T + + G ++WY
Sbjct: 902 EGLPAFPPGRPAPTFPTTGRTSTPAATFDSITGASSWY 939
>UniRef50_Q4SE53 Cluster: Chromosome undetermined SCAF14625, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF14625, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1553
Score = 33.9 bits (74), Expect = 5.3
Identities = 33/103 (32%), Positives = 41/103 (39%)
Frame = +2
Query: 536 SAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSPSGSVAL 715
SA + + A G + D D+ P AP + RP P T PP SPS L
Sbjct: 759 SASTHLLLSVSAPAAGSPSWPDPSDS---PAAAPPLSPSTRPPLFPSTRPPLSPSTRPPL 815
Query: 716 SHSSRCRYLSSV*VVRSKLGCVHXPPVXPDRCALSGTIV*VPP 844
S S+R SS R L PP+ R LS + PP
Sbjct: 816 SPSTRPPLSSS---TRPPLSSTR-PPLSSTRPPLSSSTRPPPP 854
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 499 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 377
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.3
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 250 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 86
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q4RVZ0 Cluster: Chromosome 9 SCAF14991, whole genome shotgun
sequence; n=2; Tetraodontidae|Rep: Chromosome 9
SCAF14991, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 1198
Score = 33.5 bits (73), Expect = 7.0
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 437 QNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTR 616
Q G+ Q Q+A + P C+ S S L S+ K ++G + + K+ +
Sbjct: 797 QTSGLIQPHL-HQQAFEPPVLQVVSNCFSSSNNSV-LVSLFKKTRVLQGRSSSEVLKEEK 854
Query: 617 RFP-LEAPSCALLFRPCRLPDTCPPFSPSGSVALSHSSRCRYLSSV*VVRSKLGCVHXPP 793
P L +PS F+ +P++ PP PS S +H R+ + R + P
Sbjct: 855 EVPPLSSPSYKGRFQVTPVPNSSPPKDPSSSHGGTHRKVGRFSVTKAETRKEDWQTDSSP 914
Query: 794 VXPD 805
V PD
Sbjct: 915 VSPD 918
>UniRef50_Q4WI82 Cluster: Protein-tyrosine phosphatase, putative;
n=6; Trichocomaceae|Rep: Protein-tyrosine phosphatase,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 776
Score = 33.5 bits (73), Expect = 7.0
Identities = 27/75 (36%), Positives = 38/75 (50%)
Frame = +3
Query: 555 SQKSTLKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPLREAWRFLIAHAV 734
SQ S+ V +R P VSPW++P++LS + R P+ PLR+ RF A
Sbjct: 641 SQTSSGTLSVPSTERATP-PSVSPWRIPKSLSHKRSLSPR-PL---PLRQ--RFETAQTA 693
Query: 735 GISVRCRSFAPSWAV 779
V RS AP+ A+
Sbjct: 694 AKDVGTRSLAPADAI 708
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.1 bits (72), Expect = 9.3
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 205 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 44
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,697,192
Number of Sequences: 1657284
Number of extensions: 17231626
Number of successful extensions: 48099
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 45533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48049
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 76243001646
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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