Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_G19
         (860 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-P...    29   6.2  
AY051892-1|AAK93316.1|  349|Drosophila melanogaster LD38046p pro...    29   8.2  
AE014298-1424|AAF46566.2|  349|Drosophila melanogaster CG2961-PA...    29   8.2  

>AE014297-4641|AAN14249.1|  659|Drosophila melanogaster CG31019-PA
           protein.
          Length = 659

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -3

Query: 681 QVSGKRQGRNRRAHEGASRGK 619
           +V  KR+GRNR AH   SR K
Sbjct: 491 EVRSKRRGRNRHAHHSRSRSK 511


>AY051892-1|AAK93316.1|  349|Drosophila melanogaster LD38046p
           protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +2

Query: 581 GGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSPSGSVALSHSSRCRY 739
           GG+  Q YK   + P   P+ A +  P  +P   PP +P    A S S+   Y
Sbjct: 137 GGQQAQIYKIIEQAPAPVPAPAPVPIPISIPAPAPPAAPIAYHAASGSNGYSY 189


>AE014298-1424|AAF46566.2|  349|Drosophila melanogaster CG2961-PA
           protein.
          Length = 349

 Score = 29.1 bits (62), Expect = 8.2
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = +2

Query: 581 GGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSPSGSVALSHSSRCRY 739
           GG+  Q YK   + P   P+ A +  P  +P   PP +P    A S S+   Y
Sbjct: 137 GGQQAQIYKIIEQAPAPVPAPAPVPIPISIPAPAPPAAPIAYHAASGSNGYSY 189


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,564,965
Number of Sequences: 53049
Number of extensions: 823342
Number of successful extensions: 2042
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)