Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_G18
         (905 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0258 - 1900564-1901101,1901838-1902004                           29   6.7  
03_01_0015 + 126611-126639,126718-127099                               29   6.7  

>12_01_0258 - 1900564-1901101,1901838-1902004
          Length = 234

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +2

Query: 86  SARATLPTTGAQSEPARPVPSANQARAAVNKLYSTRRNKKIKNRLSVKSV 235
           S++A + +  A +EP RP+   + A AA   L+  R   KIK+  +  +V
Sbjct: 139 SSKAAMASLHAGTEPKRPLLYPSGAAAAALGLWKCRWGAKIKSEAAAAAV 188


>03_01_0015 + 126611-126639,126718-127099
          Length = 136

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +3

Query: 495 RGCIAHSSRRETDVEHCRTRRPIVPLCRSLRALAC--TSSLKWNASERGSTA*VMFFRAC 668
           R  +AH++   T V       P +P  +++R  AC    ++ + A+ RG     +FF  C
Sbjct: 67  RNEVAHAAGERTQVLQDVASDPTLPRTKTVRCAACGHGEAVFFQATARGEEGMTLFFVCC 126

Query: 669 S 671
           +
Sbjct: 127 N 127


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,689,437
Number of Sequences: 37544
Number of extensions: 405966
Number of successful extensions: 1077
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)