Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_G18
         (905 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion transpo...    29   6.0  
AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy pro...    29   6.0  
AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical ...    29   6.0  
AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical ...    29   6.0  
Z81553-3|CAB04493.1|  136|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>U41021-5|AAA82335.2|  652|Caenorhabditis elegans Hypothetical
           protein F14D12.5 protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 555 SAFGSVRHLSLSYLSERCIRVDSC 484
           S FGS +H S+   S  C+ VD C
Sbjct: 103 SIFGSAKHSSIGVFSITCLMVDKC 126


>AY887908-1|AAX34420.1|  652|Caenorhabditis elegans anion
           transporter SULP-2 protein.
          Length = 652

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 555 SAFGSVRHLSLSYLSERCIRVDSC 484
           S FGS +H S+   S  C+ VD C
Sbjct: 103 SIFGSAKHSSIGVFSITCLMVDKC 126


>AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy
           protein 9 protein.
          Length = 947

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 504 CIRVDSCYTIIQFIIVKKQCTL*KKILTYVFVFMRTN 394
           CI +   ++++QFI V    T   + + Y F+F  TN
Sbjct: 154 CIVLQKVFSLLQFIFVMSFTTFFTQCVNYQFLFANTN 190


>AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical
           protein T22H9.2b protein.
          Length = 719

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 504 CIRVDSCYTIIQFIIVKKQCTL*KKILTYVFVFMRTN 394
           CI +   ++++QFI V    T   + + Y F+F  TN
Sbjct: 154 CIVLQKVFSLLQFIFVMSFTTFFTQCVNYQFLFANTN 190


>AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical
           protein T22H9.2a protein.
          Length = 880

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 504 CIRVDSCYTIIQFIIVKKQCTL*KKILTYVFVFMRTN 394
           CI +   ++++QFI V    T   + + Y F+F  TN
Sbjct: 154 CIVLQKVFSLLQFIFVMSFTTFFTQCVNYQFLFANTN 190


>Z81553-3|CAB04493.1|  136|Caenorhabditis elegans Hypothetical
           protein F56H6.3 protein.
          Length = 136

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +2

Query: 53  SIVGL-VFCVRXSARATLPTTGAQSEPARPVPSANQARAAVNKLYSTRRNKKIKNR 217
           S+V L VFC   S    +  TG+    A+  P A+   A  ++ +S R   +++NR
Sbjct: 44  SVVKLPVFCQIFSHNFQIFLTGSHEVAAKAPPPASAVAAPASRRHSRRMYSEVRNR 99


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,439,747
Number of Sequences: 27780
Number of extensions: 384450
Number of successful extensions: 931
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 930
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)