Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G14
(828 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces ... 152 7e-38
SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 147 1e-36
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 44 3e-05
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 31 0.26
SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces ... 27 2.5
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 26 5.7
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 26 5.7
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 26 5.7
SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces po... 25 9.9
SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6 |Schi... 25 9.9
>SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 409
Score = 152 bits (368), Expect = 7e-38
Identities = 73/182 (40%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Frame = +3
Query: 234 VFLLNRLFTEDTFQNKVNLGVGAYRDENGKPWVLPIVRKMEKQLAADETLLHEYLPVLGL 413
+F LN + +D KVN+ VGAYRD+ GKPW+LP V+K K + + HEYLP+ GL
Sbjct: 17 IFKLNAQYHQDEDPKKVNMSVGAYRDDTGKPWILPAVKKASKIVEEQASFNHEYLPIAGL 76
Query: 414 EQFCNASVAMLLGEDSPAIAAGKAFGVQVLSGTGGLRVGAEFLNK-HLKYD--TFYYSTP 584
+F A+ +L + ++ + +Q +SGTG + A F+ ++K+ Y S P
Sbjct: 77 PRFTKAAAEVLFRPNPHLLSEDRVASMQSVSGTGANFLAASFIETFYVKHTGAHVYISNP 136
Query: 585 TWENHHLVFVNSGFTKPRSYRYWDAKTRGIDFDGFIEDLKSAPENAVILLHACAHNPTXH 764
TW H ++ G T +Y YWDAK R D++G + +KSAPE ++ LLHACAHNPT
Sbjct: 137 TWPVHRTLWEKLGVTVD-TYPYWDAKNRSFDYEGMLSTIKSAPEGSIFLLHACAHNPTGI 195
Query: 765 RP 770
P
Sbjct: 196 DP 197
>SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 437
Score = 147 bits (357), Expect = 1e-36
Identities = 76/183 (41%), Positives = 105/183 (57%)
Frame = +3
Query: 222 PRIEVFLLNRLFTEDTFQNKVNLGVGAYRDENGKPWVLPIVRKMEKQLAADETLLHEYLP 401
P +F + + +D K+NLG G YRD+ GKP+VLP VR+ E +L + + L EY P
Sbjct: 47 PPDPIFGITEAYKKDGDVKKMNLGAGTYRDDAGKPYVLPSVRQAETELLSQK-LDKEYAP 105
Query: 402 VLGLEQFCNASVAMLLGEDSPAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYST 581
+ G+ F + + G+ +I + Q +SGTG L + A FL T Y S
Sbjct: 106 ITGIPSFRVQATKLAYGDVYESIK-DRLVSAQSISGTGALCIAANFLASFYPSKTIYVSD 164
Query: 582 PTWENHHLVFVNSGFTKPRSYRYWDAKTRGIDFDGFIEDLKSAPENAVILLHACAHNPTX 761
PTW NH VF +G T +SY+Y+D TRG+D G + DL SAP+ ++ILLHACAHNPT
Sbjct: 165 PTWGNHKNVFSRAGLTV-KSYKYYDPATRGLDIKGMLSDLTSAPDGSIILLHACAHNPTG 223
Query: 762 HRP 770
P
Sbjct: 224 VDP 226
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 43.6 bits (98), Expect = 3e-05
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +3
Query: 327 WVLPIVRKMEKQLAADETLLHEYLPVLGLEQFCNASVAML-LGEDSPAIAAGKAFGVQVL 503
W +VR + K+L + L HEY P ++ S+A L L D+P I AG V ++
Sbjct: 106 WSQQVVRVLVKRLNISDLLYHEYKPKFEVDTLNATSLASLPLDIDAPCIRAGLEPEVALI 165
Query: 504 ---SGTGGLRVGAEFLNKHLKYDTFY-YSTPTWENH 599
SG+ G+ FL K KY Y Y TP + NH
Sbjct: 166 NHSSGSTGVPKSMPFLMK--KYALGYDYGTPEFMNH 199
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 30.7 bits (66), Expect = 0.26
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 424 VMRLWLCSLVRIVLPSPLEKLLVCKSCPGLVVCASAQSSSTSILNMIHSTTPRL 585
++ ++CS ++ LP+PL L C S V + S LN++ + P L
Sbjct: 393 ILSAFICSPPQLPLPNPLRMYLPCPSLNSTEVSVITLAPQHSFLNIVINLNPAL 446
>SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 376
Score = 27.5 bits (58), Expect = 2.5
Identities = 8/26 (30%), Positives = 21/26 (80%)
Frame = +3
Query: 231 EVFLLNRLFTEDTFQNKVNLGVGAYR 308
E+ +++++ TED ++ +++G+G+YR
Sbjct: 136 EIIMVDQIKTEDLIESGLSIGMGSYR 161
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/45 (22%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +1
Query: 445 SLVRIVLPSPLEK--LLVCKSCPGLVVCASAQSSSTSILNMIHST 573
S+++ VL P+ LL+CK C ++ C + + ++ ++ +
Sbjct: 958 SVLKRVLDGPMRTKFLLLCKRCKAVLCCRVSPAQKADVVQLVRES 1002
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 5.7
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = +1
Query: 349 RWKNSWQQMKPYCMNTFLC*V--W-SSFVMRLWLCSLVRIVLP---SPLEK 483
RW W + KP C+ T L + W S F+ + SL+R++ +P+EK
Sbjct: 245 RWPTIWGEDKPRCLYTSLYHIFKWCSDFISKPPTKSLIRLLAEHTLNPVEK 295
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 481 KLLVCKSCPGLVVCASAQSSSTSILNMIHSTT 576
++LVC++ GL C ++ S + M+ STT
Sbjct: 890 QVLVCENLVGLFSCVFVKNKLQSKIRMLQSTT 921
>SPAC343.05 |vma1||V-type ATPase subunit A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 619
Score = 25.4 bits (53), Expect = 9.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 728 YDGILRSALEVFDEXVEVYAP 666
YDGI R ++FD+ +Y P
Sbjct: 106 YDGIQRPLKQIFDKSQSIYIP 126
>SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 9.9
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -1
Query: 477 QRRWQDYPHQGA*PQTHYKTAPDLTQEGI-HAV 382
++ W++YPH Y D T+E I H V
Sbjct: 114 EKHWEEYPHYAGYDYKDYVRLLDATKEAIAHGV 146
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,274,380
Number of Sequences: 5004
Number of extensions: 71180
Number of successful extensions: 210
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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