Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G14
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 206 1e-53
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 171 5e-43
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 161 4e-40
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 161 4e-40
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 116 2e-26
U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical p... 30 1.8
U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 5.4
Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical p... 28 7.1
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 28 7.1
U40412-1|AAA81395.1| 570|Caenorhabditis elegans Temporarily ass... 28 7.1
Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical p... 28 9.4
Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical p... 28 9.4
AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein. 28 9.4
AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein. 28 9.4
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 206 bits (504), Expect = 1e-53
Identities = 96/184 (52%), Positives = 123/184 (66%)
Frame = +3
Query: 219 APRIEVFLLNRLFTEDTFQNKVNLGVGAYRDENGKPWVLPIVRKMEKQLAADETLLHEYL 398
AP IEVF N+++ ++T KVNL +GAYR E G+PWVLP+V + E ++A D +L HEYL
Sbjct: 10 APPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIANDTSLNHEYL 69
Query: 399 PVLGLEQFCNASVAMLLGEDSPAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYS 578
PVLG E F A+ ++LG +SPAI ++FGVQ LSGTG LR GAEFL T Y S
Sbjct: 70 PVLGHEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLASVCNMKTVYVS 129
Query: 579 TPTWENHHLVFVNSGFTKPRSYRYWDAKTRGIDFDGFIEDLKSAPENAVILLHACAHNPT 758
PTW NH LVF +GFT Y +WD + + + F+ DL+SAPE +VI+LH CAHNPT
Sbjct: 130 NPTWGNHKLVFKKAGFTTVADYTFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPT 189
Query: 759 XHRP 770
P
Sbjct: 190 GMDP 193
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 171 bits (416), Expect = 5e-43
Identities = 82/184 (44%), Positives = 115/184 (62%)
Frame = +3
Query: 219 APRIEVFLLNRLFTEDTFQNKVNLGVGAYRDENGKPWVLPIVRKMEKQLAADETLLHEYL 398
AP + + F +DT NK+NLGVGAYRD+ GKP+VL VR+ E+Q+ D + EY
Sbjct: 29 APADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVLRAVREAEQQII-DAKMDKEYS 87
Query: 399 PVLGLEQFCNASVAMLLGEDSPAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYS 578
+ G+ +F + + G++S I G+ F Q +SGTG LR+G +F+ K + T +Y
Sbjct: 88 TITGVPEFAPLAAKLAFGDNSEVIRDGRVFTTQSISGTGALRIGGQFVEKFIPSKTLFYP 147
Query: 579 TPTWENHHLVFVNSGFTKPRSYRYWDAKTRGIDFDGFIEDLKSAPENAVILLHACAHNPT 758
TPTW NH VF NSG + + YRY++ +T G D +G +ED+ PE +VILLHACAHNPT
Sbjct: 148 TPTWANHLPVFRNSGLS-IQPYRYYNQETLGFDVEGALEDISKMPEGSVILLHACAHNPT 206
Query: 759 XHRP 770
P
Sbjct: 207 GVDP 210
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 161 bits (392), Expect = 4e-40
Identities = 80/172 (46%), Positives = 106/172 (61%)
Frame = +3
Query: 255 FTEDTFQNKVNLGVGAYRDENGKPWVLPIVRKMEKQLAADETLLHEYLPVLGLEQFCNAS 434
F D+ K+NLGVGAYRD+ GKP+VLP V++ E+Q+ A L EY ++GL +F S
Sbjct: 36 FKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQVIA-ANLDKEYAGIVGLPEFTKLS 94
Query: 435 VAMLLGEDSPAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYSTPTWENHHLVFV 614
+ LGE+S I + F Q +SGTG LR+G+EFL+K+ K Y TPTW NH +F
Sbjct: 95 AQLALGENSDVIKNKRIFTTQSISGTGALRIGSEFLSKYAKTKVIYQPTPTWGNHVPIFK 154
Query: 615 NSGFTKPRSYRYWDAKTRGIDFDGFIEDLKSAPENAVILLHACAHNPTXHRP 770
+G + YRY+D T G D G + D+ PE + ILLHACAHNPT P
Sbjct: 155 FAG-VDVKQYRYYDKSTCGFDETGALADIAQIPEGSTILLHACAHNPTGVDP 205
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 161 bits (392), Expect = 4e-40
Identities = 80/172 (46%), Positives = 106/172 (61%)
Frame = +3
Query: 255 FTEDTFQNKVNLGVGAYRDENGKPWVLPIVRKMEKQLAADETLLHEYLPVLGLEQFCNAS 434
F D+ K+NLGVGAYRD+ GKP+VLP V++ E+Q+ A L EY ++GL +F S
Sbjct: 36 FKADSNPKKINLGVGAYRDDQGKPFVLPSVKEAERQVIA-ANLDKEYAGIVGLPEFTKLS 94
Query: 435 VAMLLGEDSPAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYSTPTWENHHLVFV 614
+ LGE+S I + F Q +SGTG LR+G+EFL+K+ K Y TPTW NH +F
Sbjct: 95 AQLALGENSDVIKNKRIFTTQSISGTGALRIGSEFLSKYAKTKVIYQPTPTWGNHVPIFK 154
Query: 615 NSGFTKPRSYRYWDAKTRGIDFDGFIEDLKSAPENAVILLHACAHNPTXHRP 770
+G + YRY+D T G D G + D+ PE + ILLHACAHNPT P
Sbjct: 155 FAG-VDVKQYRYYDKSTCGFDETGALADIAQIPEGSTILLHACAHNPTGVDP 205
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 116 bits (279), Expect = 2e-26
Identities = 54/113 (47%), Positives = 76/113 (67%)
Frame = +3
Query: 246 NRLFTEDTFQNKVNLGVGAYRDENGKPWVLPIVRKMEKQLAADETLLHEYLPVLGLEQFC 425
+ LF ++ K+NL + AYR E+G+PWVLP+VR++E + + HEYLP+LG + FC
Sbjct: 21 SELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHEPHHNHEYLPILGHDGFC 80
Query: 426 NASVAMLLGEDSPAIAAGKAFGVQVLSGTGGLRVGAEFLNKHLKYDTFYYSTP 584
++ A+LLG DS AI G++F VQ +SGTG + VGAEFL + L T Y S P
Sbjct: 81 KSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLAQVLSMKTIYVSNP 133
>U46671-1|AAA85747.1| 364|Caenorhabditis elegans Hypothetical
protein C14E2.2 protein.
Length = 364
Score = 59.3 bits (137), Expect = 3e-09
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = +3
Query: 591 ENHHLVFVNSGFTKPRSYRYWDAKTRGIDFDGFIEDLKSAPENAVILLHACAHNPT 758
E+HHL+ +GFT Y +W+ + + +D + + DL+ AP +VI+L ACA+NPT
Sbjct: 90 ESHHLICKKAGFTTVAEYTFWNYEEKCVDIEKLLSDLEFAPAKSVIILPACAYNPT 145
>Z81586-11|CAF31485.1| 1165|Caenorhabditis elegans Hypothetical
protein T05F1.6 protein.
Length = 1165
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 761 ACGIVGACVQQYDGILRSALEVFDEXVEVYAP 666
ACG G CV D +L + +FDE ++ AP
Sbjct: 1013 ACGEQGKCVDYTDYVLPAGASIFDESQDMPAP 1044
>U42834-3|AAA83583.2| 860|Caenorhabditis elegans Hypothetical
protein F28B4.2 protein.
Length = 860
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Frame = +3
Query: 237 FLLNRLFTEDTFQNKVNLGVGAYRDENGKPWVLPIVRKMEKQLAADET---LLHEYLPVL 407
F L R+ +D QN + ENG + R +EK L D+ LL + LP
Sbjct: 733 FYLARVGLDDDLQNTDGANYKCIKIENGDRMPQLVARALEKHLIEDDKNTYLLVQLLPRG 792
Query: 408 G---LEQFCNASVAMLLGEDSPAI 470
G L CN AM SP +
Sbjct: 793 GEFVLPDNCNPFYAMAPDPTSPML 816
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/54 (33%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = -3
Query: 517 PPVPDKTCTPKAFPAAMAGLSSPRSIATDA-LQNCSRPNTGRYSCSKVSSAASC 359
PP P +TC P PAA P A +A Q C GR C C
Sbjct: 125 PPNPPRTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDC 178
>Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical
protein Y57G11C.17 protein.
Length = 524
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 343 FVRWKNSWQQMKPYCMNTFLC*VWSSFVMRLWLCSLVRIVL 465
F++ +WQ+ C N+ C +W F + W + ++L
Sbjct: 232 FIQQFETWQKTTEICWNSVKCALWFGFRLVFWF-GFIELIL 271
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 529 PTRRPPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNTGR 395
P+ RP T T PA A S+PR++ + A SRP T R
Sbjct: 241 PSARPATTTGTATRPTRPAVPAA-SAPRALTSRAPAGPSRPTTTR 284
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 529 PTRRPPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNTGR 395
P+ RP T T PA A S+PR++ + A SRP T R
Sbjct: 241 PSARPATTTGTATRPTRPAVPAA-SAPRALTSRAPAGPSRPTTTR 284
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 529 PTRRPPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNTGR 395
P+ RP T T PA A S+PR++ + A SRP T R
Sbjct: 241 PSARPATTTGTATRPTRPAVPAA-SAPRALTSRAPAGPSRPTTTR 284
>U40412-1|AAA81395.1| 570|Caenorhabditis elegans Temporarily
assigned gene nameprotein 257 protein.
Length = 570
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 517 PPVPDKTCTPKAFPAAMAGLSSPRSIATDALQNCSRPNTGRYS 389
PP P T +P+A P A +S P TD+ QN S + G +S
Sbjct: 409 PPRPPTTASPRAAPVATFKVSWP----TDSSQNDSANDWGDFS 447
>Z11115-14|CAC42391.1| 644|Caenorhabditis elegans Hypothetical
protein ZK637.7b protein.
Length = 644
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 545 VEELCADAQTTSPGQDLHTKSFSSGDGRTILTKEHSHRRI 426
+ EL ADA+ + D ++K+F +TI+ EH ++ I
Sbjct: 472 LNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNI 511
>Z11115-13|CAA77454.2| 642|Caenorhabditis elegans Hypothetical
protein ZK637.7a protein.
Length = 642
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 545 VEELCADAQTTSPGQDLHTKSFSSGDGRTILTKEHSHRRI 426
+ EL ADA+ + D ++K+F +TI+ EH ++ I
Sbjct: 470 LNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNI 509
>AF269694-1|AAF76193.1| 642|Caenorhabditis elegans LIN-9S protein.
Length = 642
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 545 VEELCADAQTTSPGQDLHTKSFSSGDGRTILTKEHSHRRI 426
+ EL ADA+ + D ++K+F +TI+ EH ++ I
Sbjct: 470 LNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNI 509
>AF269693-1|AAF76192.1| 644|Caenorhabditis elegans LIN-9L protein.
Length = 644
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 545 VEELCADAQTTSPGQDLHTKSFSSGDGRTILTKEHSHRRI 426
+ EL ADA+ + D ++K+F +TI+ EH ++ I
Sbjct: 472 LNELNADAEIQNMTSDKYSKAFQEKYAKTIIDLEHVNQNI 511
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,173,256
Number of Sequences: 27780
Number of extensions: 399256
Number of successful extensions: 1095
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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