Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G10
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical pr... 160 1e-39
U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein... 160 1e-39
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 155 3e-38
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 155 3e-38
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 155 3e-38
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 155 3e-38
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 155 3e-38
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 155 3e-38
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 155 3e-38
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 155 3e-38
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 155 3e-38
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 155 3e-38
Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical pr... 144 7e-35
Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical pr... 123 2e-28
Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical pr... 118 7e-27
Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 59 5e-09
U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical p... 31 1.4
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 28 9.9
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 28 9.9
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 28 9.9
>Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical
protein Y49E10.6 protein.
Length = 136
Score = 160 bits (389), Expect = 1e-39
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIRKLPFQRLVREIAQD K
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
Score = 64.5 bits (150), Expect = 9e-11
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS AIGALQ AS AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAI 113
>U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein 71
protein.
Length = 136
Score = 160 bits (389), Expect = 1e-39
Identities = 78/80 (97%), Positives = 79/80 (98%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIRKLPFQRLVREIAQD K
Sbjct: 61 LLIRKLPFQRLVREIAQDFK 80
Score = 64.5 bits (150), Expect = 9e-11
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS AIGALQ AS AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAI 113
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 155 bits (377), Expect = 3e-38
Identities = 75/80 (93%), Positives = 78/80 (97%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LLIR+ PFQRLVREIAQD K
Sbjct: 61 LLIRRAPFQRLVREIAQDFK 80
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS A+ ALQ A+ AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCAI 113
>Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical
protein W05B10.1 protein.
Length = 136
Score = 144 bits (349), Expect = 7e-35
Identities = 72/80 (90%), Positives = 74/80 (92%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTKQTARKSTGGKAPRK LATKAARKSA TG VKK HR+RPGTVALREIRRYQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREIRRYQKSTE 60
Query: 480 LLIRKLPFQRLVREIAQDSK 539
LL+RKLPFQRLVREIAQD K
Sbjct: 61 LLLRKLPFQRLVREIAQDFK 80
Score = 64.5 bits (150), Expect = 9e-11
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
FKTDLRFQS AIGALQ AS AYLVGLFED NLCAI
Sbjct: 79 FKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAI 113
>Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical
protein E03A3.3 protein.
Length = 127
Score = 123 bits (296), Expect = 2e-28
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +3
Query: 336 GGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLV 515
GGKAPRKQLATKAARK+A G VKKPHR+RPGTVALREIRRYQKST+LL+RKLPFQRLV
Sbjct: 4 GGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVALREIRRYQKSTDLLLRKLPFQRLV 63
Query: 516 REIAQDSK 539
REIAQD K
Sbjct: 64 REIAQDVK 71
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/34 (76%), Positives = 27/34 (79%)
Frame = +2
Query: 536 KTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
K DLRFQS AI ALQ AS +LVGLFED NLCAI
Sbjct: 71 KQDLRFQSAAIQALQEASEYFLVGLFEDTNLCAI 104
>Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical
protein E03A3.4 protein.
Length = 126
Score = 118 bits (283), Expect = 7e-27
Identities = 60/78 (76%), Positives = 66/78 (84%)
Frame = +3
Query: 300 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 479
MARTK TARKS GGKAPRK LATKAARK P G VKK RYRP + AL+EIR+YQKSTE
Sbjct: 1 MARTKHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEIRKYQKSTE 58
Query: 480 LLIRKLPFQRLVREIAQD 533
LL+RKLPFQRLVRE+AQ+
Sbjct: 59 LLVRKLPFQRLVREVAQE 76
Score = 48.0 bits (109), Expect = 9e-06
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 542 DLRFQSXAIGALQXASXAYLVGLFEDPNLCAI 637
++RFQS AI AL A+ AYL+GLFED NLCAI
Sbjct: 80 NVRFQSAAIQALHEAAEAYLIGLFEDTNLCAI 111
>Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical
protein F58A4.3 protein.
Length = 288
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3
Query: 405 VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDS 536
V K RYRPG AL EIR+YQK+ +LLI+K PF RLVREI Q S
Sbjct: 185 VTKTRRYRPGQKALEEIRKYQKTEDLLIQKAPFARLVREIMQTS 228
Score = 32.7 bits (71), Expect = 0.35
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNL 628
F D R +S AI ALQ A+ A+LV +FE +L
Sbjct: 231 FGADCRIRSDAISALQEAAEAFLVEMFEGSSL 262
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +3
Query: 405 VKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDS 536
+ K RYRPG AL EIR+YQ+S +LLI K PF RLVREI Q S
Sbjct: 158 ISKTRRYRPGQKALEEIRKYQESEDLLIPKAPFARLVREIMQTS 201
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNL 628
F +DLR +S AI ALQ AS A LV +F+ +L
Sbjct: 204 FSSDLRIRSDAINALQEASEALLVQMFDGSSL 235
>U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical
protein F20D6.9 protein.
Length = 118
Score = 52.0 bits (119), Expect = 5e-07
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +3
Query: 411 KPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQD 533
+ + + GTVALREIR+ Q+STELLI + F+RLV+E+AQD
Sbjct: 20 RSYPFHSGTVALREIRKQQQSTELLIPRSRFERLVKELAQD 60
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/36 (58%), Positives = 23/36 (63%)
Frame = +2
Query: 533 FKTDLRFQSXAIGALQXASXAYLVGLFEDPNLCAIQ 640
F TDL F+ AI ALQ A YLV LF NLCAI+
Sbjct: 61 FVTDLIFRKDAIDALQAAVEDYLVELFRLGNLCAIK 96
>Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.10 protein.
Length = 151
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +3
Query: 303 ARTKQTARKSTGGK--APRKQLATKAARKSAP 392
+R++ +R ST GK AP+K + TKAAR +P
Sbjct: 94 SRSRSRSRSSTRGKKRAPKKAVTTKAARSISP 125
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 328 NLLEVKLRVNNLLQKRRENQRRALVESRSHI 420
+L E+K +++L + R+++RR +V S SHI
Sbjct: 811 DLHEIKQDISSLRYELRDDRRREIVRSSSHI 841
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 328 NLLEVKLRVNNLLQKRRENQRRALVESRSHI 420
+L E+K +++L + R+++RR +V S SHI
Sbjct: 791 DLHEIKQDISSLRYELRDDRRREIVRSSSHI 821
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 328 NLLEVKLRVNNLLQKRRENQRRALVESRSHI 420
+L E+K +++L + R+++RR +V S SHI
Sbjct: 791 DLHEIKQDISSLRYELRDDRRREIVRSSSHI 821
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,145,462
Number of Sequences: 27780
Number of extensions: 272619
Number of successful extensions: 674
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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