Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_G08
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0010 - 62670-62783,62877-63020,63339-63431,63665-63779,639...    65   8e-11
01_01_0280 + 2295043-2295154,2295258-2295475,2295558-2296970           33   0.38 
05_03_0612 - 16177362-16178102,16178404-16178539,16180612-161806...    29   6.2  
06_01_0687 + 5019102-5019182,5019391-5019470,5019600-5019670,501...    28   8.1  

>01_01_0010 -
           62670-62783,62877-63020,63339-63431,63665-63779,
           63902-64152,64248-64431,64694-64950
          Length = 385

 Score = 64.9 bits (151), Expect = 8e-11
 Identities = 33/108 (30%), Positives = 55/108 (50%)
 Frame = +2

Query: 287 VLDGFYDSLSNSVYIIDLLAWNNQAMTDGETDFRHFWLQTQVFIIQALNVLSKVNKLKFF 466
           +LD  +     + YIID++ W   ++ D   +FR FW+ +++    A +  S  ++ +F 
Sbjct: 140 ILDCIFHEPDETYYIIDMICWRGYSLYDCTAEFRFFWVNSKLMETTAGDPPSTYHRYRFS 199

Query: 467 LLPKVPCSREELNQFMMTYPAFENYIPALDGLLFYHKKTHYISGQTPL 610
            +P   C+   L      Y     Y+   DGLLFY+K  HY++G TPL
Sbjct: 200 AVPIYECT---LQGLQAAYSGSTPYVK--DGLLFYNKHAHYLAGITPL 242


>01_01_0280 + 2295043-2295154,2295258-2295475,2295558-2296970
          Length = 580

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 22/77 (28%), Positives = 33/77 (42%)
 Frame = +2

Query: 392 FWLQTQVFIIQALNVLSKVNKLKFFLLPKVPCSREELNQFMMTYPAFENYIPALDGLLFY 571
           FW   Q FII A  V + V +L+FF        R   +   +T  A  NY+  L   +  
Sbjct: 456 FWQVPQYFIIGAAEVFTFVGQLEFFYDQAPDAMRSMCSALSLTTVALGNYLSTLLVTIVT 515

Query: 572 HKKTHYISGQTPLVGWL 622
           H     ++ +   VGW+
Sbjct: 516 H-----VTTRNGAVGWI 527


>05_03_0612 -
           16177362-16178102,16178404-16178539,16180612-16180658,
           16181002-16181082,16181765-16181846,16181924-16182036,
           16182349-16182456,16182531-16182642,16182738-16182847,
           16183105-16183242,16183370-16183834
          Length = 710

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 407 QVFIIQALNVLSKVNKLKFFLLPKVPCSREELNQFMMTYPAF 532
           QVF +  L V S+V  LKFF+    PC R+   Q +   P F
Sbjct: 663 QVFYVSDLEVPSEVTALKFFI---QPCGRDGSCQGLHECPKF 701


>06_01_0687 +
           5019102-5019182,5019391-5019470,5019600-5019670,
           5019902-5019972,5020068-5020149,5020711-5020760,
           5020965-5021051
          Length = 173

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 176 ITGRTKLYNKYGRFRLDTKTLLPG 247
           I G+  LYN+YGR  L +K L+ G
Sbjct: 83  IKGKQSLYNQYGRVMLFSKVLIYG 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,932,156
Number of Sequences: 37544
Number of extensions: 359882
Number of successful extensions: 700
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)