Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_G08
         (845 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-499|AAF47676.2|  883|Drosophila melanogaster CG32297-PA...    86   7e-17

>AE014296-499|AAF47676.2|  883|Drosophila melanogaster CG32297-PA
           protein.
          Length = 883

 Score = 85.8 bits (203), Expect = 7e-17
 Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
 Frame = +2

Query: 182 GRTKLYNKYGRFRLDTKTLLPGGHPNKGYQKTDCCVLDGFYDSLSNSVYIIDLLAWNNQA 361
           G TK Y+K G   ++ ++ LPG       QK +  +LD  Y   +++ Y++D +++  Q 
Sbjct: 104 GITKAYSKGGWMFVNFRSSLPGDWQ---LQKGET-ILDCVYVEDADTFYVLDAISFGLQE 159

Query: 362 MTDGETDFRHFWLQTQVFIIQALNVLSKVNKLKFFLLPKVPCSREE-LNQFMMTYPAFEN 538
           + + E  FR +WL+ + F     + +S+ N+ KF LL          + Q +  YP F  
Sbjct: 160 VQECEASFRFYWLRAR-FEEHDYDKISENNEKKFKLLDHFDFEDPSAVEQALHKYPFFPE 218

Query: 539 YIPALDGLLFYHKKTHYISGQTPLVGWLYPFM 634
             P LDG LFYHK+  Y+  +TPLV WL+PFM
Sbjct: 219 NKPDLDGFLFYHKEASYVCRETPLVCWLFPFM 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,248,302
Number of Sequences: 53049
Number of extensions: 634577
Number of successful extensions: 1340
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)