Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G07
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 293 2e-80
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 115 1e-26
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 109 7e-25
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 106 4e-24
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 95 1e-20
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 93 5e-20
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 90 4e-19
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 87 4e-18
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 33 0.071
SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex ... 28 1.5
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 27 2.7
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 27 3.5
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 27 4.6
SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr 2|... 26 6.1
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 26 8.1
SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomy... 26 8.1
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 293 bits (720), Expect = 2e-80
Identities = 143/247 (57%), Positives = 187/247 (75%)
Frame = +2
Query: 131 ISLLNPKAEFARAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVL 310
+SLLNPKAE + AQAL VNISAA G+QDV+K+NLGP GT KMLV GAG IK+TKDG VL
Sbjct: 2 LSLLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVL 61
Query: 311 LHEMQIQHPTASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGF 490
L EMQIQ+PTAS IA+ LL+GELLKQA+++I EGLHP +I++GF
Sbjct: 62 LTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGF 121
Query: 491 DIARNKSLEVLESMKIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPG 670
++A+N++L L+S K EV RE L++VA+TSL TK+ + + L A VDA+LTIR P
Sbjct: 122 NLAKNEALTFLDSFKTDFEVDREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPD 181
Query: 671 KPVDLHMVEIMEMKHKTATETVLVKGLVMDHGARHQICQSVXENAYILTCNVSLEYEKTE 850
+P+DLHMVEIM+M++++A++T L++GL++DHGARH +NAYIL NVSLEYEK+E
Sbjct: 182 EPIDLHMVEIMKMQNRSASDTQLIRGLLLDHGARHPDMPKQVKNAYILILNVSLEYEKSE 241
Query: 851 VNSGFFY 871
+NSGFFY
Sbjct: 242 INSGFFY 248
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 115 bits (276), Expect = 1e-26
Identities = 71/231 (30%), Positives = 124/231 (53%), Gaps = 6/231 (2%)
Frame = +2
Query: 176 ALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIA 355
A+ +I A K + ++++T+LGP+G K+L+S G+I +T DG +L +M+++H A L+
Sbjct: 35 AVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLV 94
Query: 356 RXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMK 535
+ V+L G LL+QA+ I +G+HP I +G++ A +++ L+++
Sbjct: 95 QLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAIS 154
Query: 536 IPIEVARENLVDV---ARTSLKTKVHPSLADVLTDACVDAVLTIR-TPGKPVDLHMVEIM 703
++ + EN ++ A+TSL +KV D + VDAVL++ K VD ++++
Sbjct: 155 DVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKVD 214
Query: 704 EMKHKTATETVLVKGLVMDHGARHQICQSVXENA--YILTCNVSLEYEKTE 850
+ +T LVKG+V+D H ENA ILTC KT+
Sbjct: 215 GKVGGSVDDTKLVKGVVVDKDMSHPQMPHRIENAKIAILTCPFEPPKPKTK 265
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 109 bits (261), Expect = 7e-25
Identities = 60/197 (30%), Positives = 104/197 (52%), Gaps = 3/197 (1%)
Frame = +2
Query: 188 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 367
NI AA+ + D ++T+LGPKG KM+ +G G++ +T DG +L + + HP A ++
Sbjct: 24 NIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSA 83
Query: 368 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 547
V+L G +L A+ + +G+HP +I E F A +++ ++ + IE
Sbjct: 84 AQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIE 143
Query: 548 VA-RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTP--GKPVDLHMVEIMEMKHK 718
++ RE+L+ A TSL +K+ +++L VDAVL + P VDL + I++
Sbjct: 144 LSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVIDPRVATNVDLKDIRIVKKLGG 203
Query: 719 TATETVLVKGLVMDHGA 769
+T L+ GL + A
Sbjct: 204 IIDDTELIPGLALTQTA 220
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 106 bits (255), Expect = 4e-24
Identities = 59/225 (26%), Positives = 121/225 (53%), Gaps = 6/225 (2%)
Frame = +2
Query: 188 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 367
N+ A I +V+K++LGP G KMLV GD+ +T DG +L + ++HP ++
Sbjct: 26 NVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQ 85
Query: 368 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVL-ESMKIPI 544
V++ ELL++A+ + +HP I G+ +A ++++ + + + +
Sbjct: 86 QQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSV 145
Query: 545 E-VARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVD----LHMVEIMEM 709
+ + +E+L++VA+TS+ +K+ + +D + VDA+L+++T + + V I++
Sbjct: 146 DSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKA 205
Query: 710 KHKTATETVLVKGLVMDHGARHQICQSVXENAYILTCNVSLEYEK 844
K++ E+VLVKG ++ Q ++ +NA I ++ L+ K
Sbjct: 206 HGKSSRESVLVKGYALNCTIASQAMKTRVQNAKIAVLDMDLQKTK 250
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 95.1 bits (226), Expect = 1e-20
Identities = 54/226 (23%), Positives = 107/226 (47%), Gaps = 5/226 (2%)
Frame = +2
Query: 188 NISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIARXXX 367
NI AAK + DV++T LGP+ +KML+ G + +T DG+ +L E+++ HP A +
Sbjct: 24 NIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELAR 83
Query: 368 XXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIE 547
++L GE+L A + +HP ++ F A +L +++ + +P+
Sbjct: 84 TQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEITLPVN 143
Query: 548 V-ARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGK---PVDL-HMVEIMEMK 712
V + + RT + TK+ +D++ + AV T+ + +D+ + ++
Sbjct: 144 VDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTVASTSNGRMEIDIKRYARVEKVP 203
Query: 713 HKTATETVLVKGLVMDHGARHQICQSVXENAYILTCNVSLEYEKTE 850
+ ++ G++++ H + EN I+ + LEY K E
Sbjct: 204 GGEIESSCVLDGVMLNKDVTHPKMRRRIENPRIVLLDCPLEYRKGE 249
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 93.1 bits (221), Expect = 5e-20
Identities = 62/236 (26%), Positives = 117/236 (49%), Gaps = 6/236 (2%)
Frame = +2
Query: 164 RAAQALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGA-GDIKITKDGNVLLHEMQIQHPT 340
R A + A + D++K+ LGPKG K+L S + GDI +T DG +L + + +
Sbjct: 17 RGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIALDNAA 76
Query: 341 ASLIARXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEV 520
A ++ + ELL+QA+I ++ +HP++I +G+ IA +++
Sbjct: 77 AKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDA 136
Query: 521 LESMKI-----PIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDL 685
L + I P + R +L ++ART+L +K+ + VDAVL ++ +L
Sbjct: 137 LRASSIDNSSDPAKF-RSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLK---GSTNL 192
Query: 686 HMVEIMEMKHKTATETVLVKGLVMDHGARHQICQSVXENAYILTCNVSLEYEKTEV 853
++I+++ ++ L +G +++ C V ENA IL N +++ +K +V
Sbjct: 193 DNIQIIKILGGKLDDSFLDEGFILNKTIGVN-CPKVMENANILIANTAMDTDKVKV 247
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 89.8 bits (213), Expect = 4e-19
Identities = 55/230 (23%), Positives = 114/230 (49%), Gaps = 5/230 (2%)
Frame = +2
Query: 176 ALAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIA 355
A+ N +A + + ++ +T+LGP G K++V+ +T D ++ E+++ HP A L+
Sbjct: 27 AVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVV 86
Query: 356 RXXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESM- 532
V+ GELL +A+ I GL P I +G+++A + ++EVLE +
Sbjct: 87 DATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEIC 146
Query: 533 --KIPIEVARENLVDVARTSLKTKVHPSLADVLTDACVDAVLTI--RTPGKPVDLHMVEI 700
KI + + L+ RT + +K + + D L+D A+LT+ + P K ++ + +
Sbjct: 147 ADKIETVESEKELIKAIRTCISSKQYGN-EDFLSDLVAKAILTVLPKDPSK-FNVDNIRV 204
Query: 701 MEMKHKTATETVLVKGLVMDHGARHQICQSVXENAYILTCNVSLEYEKTE 850
+++ + + +VKG+V + +S + +C + + +T+
Sbjct: 205 VKIMGSSLYNSQVVKGMVFPREPEGTVTRSKEAKVAVFSCPLDISQTETK 254
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 86.6 bits (205), Expect = 4e-18
Identities = 60/235 (25%), Positives = 114/235 (48%), Gaps = 8/235 (3%)
Frame = +2
Query: 179 LAVNISAAKGIQDVMKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR 358
L NI+A +QD ++T LGP G K++V G++ I+ DG ++ + I HP A +
Sbjct: 26 LLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVD 85
Query: 359 XXXXXXXXXXXXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKI 538
V+ GELL++A F+ +G+ +I G+ A ++ ++ + I
Sbjct: 86 IARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAI 145
Query: 539 PIEVA-----RENLVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIM 703
++++ R+ L A T++ +K+ S + T VDAVLT+ + ++ +M+ I
Sbjct: 146 HLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTL--DQEDLNENMIGIK 203
Query: 704 EMKHKTATETVLVKGLVMDHG---ARHQICQSVXENAYILTCNVSLEYEKTEVNS 859
++ +++LVKG+ A + +N IL +V LE + + N+
Sbjct: 204 KVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKILCLDVELELKAEKDNA 258
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 32.7 bits (71), Expect = 0.071
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 6/153 (3%)
Frame = +2
Query: 221 MKTNLGPKGTMKMLVSGAGDIKITKDGNVLLHEMQIQHPTASLIAR----XXXXXXXXXX 388
+ LGPKG ++ G KITKDG + + ++ +L AR
Sbjct: 58 VSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAG 117
Query: 389 XXXXXXVLLIGELLKQADIFISEGLHPRIITEGFDIARNKSLEVLESMKIPIEVARENLV 568
+L + + ++ G +P + G +A + +E L++ K I + E +
Sbjct: 118 DGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTS-EEIS 176
Query: 569 DVARTSLK--TKVHPSLADVLTDACVDAVLTIR 661
VA S T + LA + + V+T++
Sbjct: 177 QVATISANGDTHIGELLAKAMERVGKEGVITVK 209
>SPBC18E5.02c ||SPBC29A3.20c|serine palmitoyltransferase complex
subunit |Schizosaccharomyces pombe|chr 2|||Manual
Length = 509
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 443 IFISEGLHPRIITEGFDIARNKSLEVLESMKI 538
+F+ E + I EGF IAR K +E LE +K+
Sbjct: 437 VFLLEEIVELCIAEGFLIARAKRVESLERVKV 468
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +2
Query: 563 LVDVARTSLKTKVHPSLADVLTDACVDAVLTIRTPGKPVDLHMVEIMEMKHK 718
L D++ T K VHPS++ L A + L +++ G + ++VE +HK
Sbjct: 14 LSDISTTINKPNVHPSMS--LLKALPECRLVVKSKGDKNNANVVEFPLDRHK 63
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 647 PHQRKHQLAHLQGLGGP*F*VKY 579
PHQR H A L GGP F + Y
Sbjct: 63 PHQRAHNAAALARSGGPGFSMNY 85
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = -3
Query: 808 VCIFXHALAYLVTCTMIHY*TFYKYSFSSRLVFHL--HNFNHVQINRFAWSSNGEYR-IN 638
+C F HAL + +++ FY+ + SS +L H F HV N++ + + +
Sbjct: 349 LCTFFHALQCAIISSIVSQWFFYRDTKSSATKTNLVSHFFYHVVSNQYGLCAFSSFLVVI 408
Query: 637 ASIS*HICKAWV 602
+ H W+
Sbjct: 409 TKVPLHFLPTWL 420
>SPBC1685.05 |||serine protease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 997
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 733 CTCKRSSNGSWCTSPDMPKRXRKC 804
C +R SNG WCT K C
Sbjct: 973 CIIERDSNGRWCTKHLQRKTKEVC 996
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/43 (27%), Positives = 27/43 (62%)
Frame = +2
Query: 503 NKSLEVLESMKIPIEVARENLVDVARTSLKTKVHPSLADVLTD 631
++SL++L+ + V+ ++ VD+ART ++ S ++V+ D
Sbjct: 270 SESLDLLDDFNYQVTVSNKSFVDIARTEYFITIY-SDSNVILD 311
>SPCC970.02 |||mannan endo-1,6-alpha-mannosidase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 442
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 818 CNVSLEYEKTEVNSGFFYK 874
CN L ++ TE NSG+ YK
Sbjct: 162 CNGGLRWQITEFNSGYNYK 180
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,346,166
Number of Sequences: 5004
Number of extensions: 64732
Number of successful extensions: 153
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -