Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_G05
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37139-9|CAA85493.1|  396|Caenorhabditis elegans Hypothetical pr...   217   7e-57
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    54   1e-07
Z37092-9|CAA85458.1|  126|Caenorhabditis elegans Hypothetical pr...    30   2.6  

>Z37139-9|CAA85493.1|  396|Caenorhabditis elegans Hypothetical
           protein C14B1.5 protein.
          Length = 396

 Score =  217 bits (531), Expect = 7e-57
 Identities = 97/172 (56%), Positives = 128/172 (74%), Gaps = 2/172 (1%)
 Frame = +1

Query: 274 LPENYNFEIHKTIWRIRSTAAKRVALQMPEGLTMFATTLCDIIETFTEADTVIMGDVTYG 453
           LP NY FE+ KTIW+IRST +K VALQ PEGL M+A  + DI+E +T  DTVIMGDVTYG
Sbjct: 28  LPSNYTFEVPKTIWKIRSTESKYVALQFPEGLIMYACVIADILEKYTGCDTVIMGDVTYG 87

Query: 454 ACCIDDFTAVALGVDLLVHYGHSCLIPIDQTSSIKVLYIFVDIKIDPSHFIETIKVNFPS 633
           ACC+DD+TA ++G DLLVHYGHSCL+PI  T  I +LY+FV+I I+ SH I+ +K NF  
Sbjct: 88  ACCVDDYTAKSMGCDLLVHYGHSCLVPIQNTDGIAMLYVFVNIHINLSHLIDCVKENFQG 147

Query: 634 KTHLALVSTIQFVTTLHSVAKNLRIEE--YMVTVPQTKPLSPGEILGCTAPK 783
           K  L +VST+QF+ +L ++      ++    + +PQ KPLSPGE+LGCT+P+
Sbjct: 148 K-RLVVVSTVQFIPSLQTLRTTFNKDDSSIRIDIPQCKPLSPGEVLGCTSPR 198


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
 Frame = +1

Query: 274 LPEN---YNFEIHKTIWRIRSTAAKRVALQMPEGLTMFATTLCDIIETFTEAD----TVI 432
           LPEN     FEI  T   I+    +R+ALQ P+ L  ++  +  +IE+   ++    T +
Sbjct: 33  LPENDIHSFFEIDATSEWIKQGNHQRIALQFPDSLLPYSEKVTKLIESRFRSESAKKTFV 92

Query: 433 MGDVTYGACCIDDFTAVALGVDLLVHYGHSCLIPIDQTSSIKVLYIFVDIKIDPSHFIET 612
           + D +Y +CC+D+  A       LVH+G +C      T  I V Y+   + I    FI+ 
Sbjct: 93  LADTSYRSCCVDEVAAAHADCTALVHFGEAC--HSAPTDKIDVKYVLGSMPI----FIDQ 146

Query: 613 IKVNF 627
            ++ F
Sbjct: 147 FRMEF 151


>Z37092-9|CAA85458.1|  126|Caenorhabditis elegans Hypothetical
           protein F44F4.9 protein.
          Length = 126

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 538 DQTSSIKVLYIFVDIKIDPSHFIETIKVNFPSKTHLAL--VSTIQFVTTLHSVAKNLRIE 711
           D  S I+ L  F +I I   H ++     F   + LA+  +ST+ F  +L+S  KN R+ 
Sbjct: 7   DYMSGIQFLNSFQNIYI---HSVKDTLAMFTLYSTLAIFVISTVIFGLSLYSFLKNRRLR 63

Query: 712 EYMVTVPQ 735
           ++ ++ PQ
Sbjct: 64  QFKLSEPQ 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,205,476
Number of Sequences: 27780
Number of extensions: 409614
Number of successful extensions: 846
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)