Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_G03
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034364-3|CAA22253.1|  162|Caenorhabditis elegans Hypothetical ...    33   0.28 
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z81584-9|CAB04680.2|  334|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z81584-2|CAE53738.1|  298|Caenorhabditis elegans Hypothetical pr...    30   2.0  
U80441-7|AAB37655.1|  252|Caenorhabditis elegans Hypothetical pr...    30   2.6  
U80441-6|AAT68894.1|  256|Caenorhabditis elegans Hypothetical pr...    30   2.6  
Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    29   4.5  
U64847-11|AAB04878.2|  151|Caenorhabditis elegans Hypothetical p...    28   7.9  
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ...    28   7.9  

>AL034364-3|CAA22253.1|  162|Caenorhabditis elegans Hypothetical
           protein W06D4.5 protein.
          Length = 162

 Score = 33.1 bits (72), Expect = 0.28
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +3

Query: 438 QFLESRRAALQRWLSLAACHPILAHDADLRTFLSESVL 551
           +F+E+RR AL+ +++  A HP+  ++  L  FL E  +
Sbjct: 113 EFIENRRKALELFINKVAGHPLAQNERSLHIFLQEPTI 150


>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
           protein C31E10.8 protein.
          Length = 1272

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 454 VALLSNVGYRWPPVIQYWRMTLTCAP 531
           + +  N G RWP  +Q W M L+ +P
Sbjct: 784 LTVFENAGERWPTSVQMWHMPLSSSP 809


>Z81584-9|CAB04680.2|  334|Caenorhabditis elegans Hypothetical
           protein T04C12.2a protein.
          Length = 334

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 245 LVPERKGIILKHCEYYVSSRRHGTTVTRRYNDFVQLYDVLFAKYPYR 385
           L+P   GI++ +CEYY     +   +    + F   + ++   +PYR
Sbjct: 273 LLPVIIGIVVIYCEYYNQELNNSLVLFLSLHGFTSTFVIILVHHPYR 319


>Z81584-2|CAE53738.1|  298|Caenorhabditis elegans Hypothetical
           protein T04C12.2b protein.
          Length = 298

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = +2

Query: 245 LVPERKGIILKHCEYYVSSRRHGTTVTRRYNDFVQLYDVLFAKYPYR 385
           L+P   GI++ +CEYY     +   +    + F   + ++   +PYR
Sbjct: 237 LLPVIIGIVVIYCEYYNQELNNSLVLFLSLHGFTSTFVIILVHHPYR 283


>U80441-7|AAB37655.1|  252|Caenorhabditis elegans Hypothetical
           protein F27C1.2a protein.
          Length = 252

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +3

Query: 336 MILYSF--TMCYLLNILIGLYVSYLRKRVVVGGGSGQFL 446
           M+LY F   + Y L +++  Y +YL   VV+G G G +L
Sbjct: 191 MLLYIFQLVLAYWLMLIVMTYNTYLTAAVVLGAGFGHWL 229


>U80441-6|AAT68894.1|  256|Caenorhabditis elegans Hypothetical
           protein F27C1.2b protein.
          Length = 256

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +3

Query: 336 MILYSF--TMCYLLNILIGLYVSYLRKRVVVGGGSGQFL 446
           M+LY F   + Y L +++  Y +YL   VV+G G G +L
Sbjct: 195 MLLYIFQLVLAYWLMLIVMTYNTYLTAAVVLGAGFGHWL 233


>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 693 YPSPSTRSAVVPAPSQTSPSFRLE 622
           YPSPS  S   P+PS  SPS+  E
Sbjct: 372 YPSPSYPSPSYPSPSYPSPSYPAE 395



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 693 YPSPSTRSAVVPAPSQTSPSF 631
           YPSPS  S   P+PS  SPS+
Sbjct: 367 YPSPSYPSPSYPSPSYPSPSY 387


>U64847-11|AAB04878.2|  151|Caenorhabditis elegans Hypothetical
           protein F08F3.1 protein.
          Length = 151

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +3

Query: 438 QFLESRRAALQRWLSLAACHPILAHDADLRTFLSESVLRLEKP 566
           +FL S+     R +  +A HP + H  D+  F +E+ +  E+P
Sbjct: 46  EFLSSQFMQFNRSVRKSAIHPPIFHKRDVPVFHNETTVTPERP 88


>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
           protein Y47A7.1 protein.
          Length = 1114

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +3

Query: 660 EQLRILYLGMDRLXQIFDRVKIXCXAXKSXSVSWGRAAGAVTRTGDTRS 806
           + L  +YL M+ +    D ++      K     W R A A TR G  R+
Sbjct: 504 DALSTIYLEMNNISDAIDELQQMVRLHKENKSVWARLADAYTRKGHLRA 552


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,140,496
Number of Sequences: 27780
Number of extensions: 343298
Number of successful extensions: 1063
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)