Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G01
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein comple... 268 1e-71
AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop ... 268 1e-71
AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein. 268 1e-71
BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein. 256 1e-67
BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein. 256 1e-67
AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP... 256 1e-67
AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protei... 256 1e-67
AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein. 256 1e-67
AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens ... 186 1e-46
BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein. 78 4e-14
BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein... 42 0.002
AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein... 42 0.002
AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein... 42 0.002
AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex be... 42 0.002
AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein... 42 0.002
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 38 0.036
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 38 0.036
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 38 0.036
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 38 0.036
U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein. 38 0.048
BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein... 38 0.048
AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B sub... 38 0.048
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 33 1.8
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 33 1.8
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 33 1.8
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 33 1.8
BC105005-1|AAI05006.1| 773|Homo sapiens diacylglycerol kinase, ... 32 2.4
AC073258-1|AAS07533.1| 413|Homo sapiens unknown protein. 32 2.4
AB018261-1|BAA34438.1| 742|Homo sapiens KIAA0718 protein protein. 32 2.4
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 32 3.1
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 32 3.1
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 32 3.1
>BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein complex,
subunit gamma protein.
Length = 874
Score = 268 bits (658), Expect = 1e-71
Identities = 135/225 (60%), Positives = 162/225 (72%), Gaps = 1/225 (0%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++PRKC HILTKILYL+NQGE L T EAT+ FFA TKLFQS D
Sbjct: 22 LEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSND 81
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RALC ITDSTMLQAIE
Sbjct: 82 PTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAIE 141
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVDK P D+V+RW+NEAQEA +SD++MV YHAL ++
Sbjct: 142 RYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHALGLLY 201
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA-XXLAEEDPS 858
R+NDRL+ K+I+K+ R ++SP+ C+ IR A L EED S
Sbjct: 202 HVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVASKQLEEEDGS 246
>AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop
protein.
Length = 874
Score = 268 bits (658), Expect = 1e-71
Identities = 135/225 (60%), Positives = 162/225 (72%), Gaps = 1/225 (0%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++PRKC HILTKILYL+NQGE L T EAT+ FFA TKLFQS D
Sbjct: 22 LEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSND 81
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RALC ITDSTMLQAIE
Sbjct: 82 PTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAIE 141
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVDK P D+V+RW+NEAQEA +SD++MV YHAL ++
Sbjct: 142 RYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHALGLLY 201
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA-XXLAEEDPS 858
R+NDRL+ K+I+K+ R ++SP+ C+ IR A L EED S
Sbjct: 202 HVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVASKQLEEEDGS 246
>AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein.
Length = 874
Score = 268 bits (658), Expect = 1e-71
Identities = 135/225 (60%), Positives = 162/225 (72%), Gaps = 1/225 (0%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++PRKC HILTKILYL+NQGE L T EAT+ FFA TKLFQS D
Sbjct: 22 LEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSND 81
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RALC ITDSTMLQAIE
Sbjct: 82 PTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAIE 141
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVDK P D+V+RW+NEAQEA +SD++MV YHAL ++
Sbjct: 142 RYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHALGLLY 201
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFA-XXLAEEDPS 858
R+NDRL+ K+I+K+ R ++SP+ C+ IR A L EED S
Sbjct: 202 HVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRVASKQLEEEDGS 246
>BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein.
Length = 726
Score = 256 bits (626), Expect = 1e-67
Identities = 126/221 (57%), Positives = 156/221 (70%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++PR+C+HILTKILYLLNQGE T EAT+ FFA T+LFQS D
Sbjct: 22 LEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRLFQSND 81
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIE
Sbjct: 82 QTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIE 141
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVDK D+V+RWINEAQEA +SD++MV YHAL V+
Sbjct: 142 RYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHALGVLY 201
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAXXLAEE 849
R+NDRL+ K++ K ++ ++S + C+ IR A L +E
Sbjct: 202 HLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKE 242
>BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein.
Length = 865
Score = 256 bits (626), Expect = 1e-67
Identities = 126/221 (57%), Positives = 156/221 (70%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++PR+C+HILTKILYLLNQGE T EAT+ FFA T+LFQS D
Sbjct: 16 LEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRLFQSND 75
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIE
Sbjct: 76 QTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIE 135
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVDK D+V+RWINEAQEA +SD++MV YHAL V+
Sbjct: 136 RYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHALGVLY 195
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAXXLAEE 849
R+NDRL+ K++ K ++ ++S + C+ IR A L +E
Sbjct: 196 HLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKE 236
>AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP
protein.
Length = 871
Score = 256 bits (626), Expect = 1e-67
Identities = 126/221 (57%), Positives = 156/221 (70%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++PR+C+HILTKILYLLNQGE T EAT+ FFA T+LFQS D
Sbjct: 22 LEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRLFQSND 81
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIE
Sbjct: 82 QTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIE 141
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVDK D+V+RWINEAQEA +SD++MV YHAL V+
Sbjct: 142 RYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHALGVLY 201
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAXXLAEE 849
R+NDRL+ K++ K ++ ++S + C+ IR A L +E
Sbjct: 202 HLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKE 242
>AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protein
gamma2-COP protein.
Length = 871
Score = 256 bits (626), Expect = 1e-67
Identities = 126/221 (57%), Positives = 156/221 (70%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++PR+C+HILTKILYLLNQGE T EAT+ FFA T+LFQS D
Sbjct: 22 LEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRLFQSND 81
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIE
Sbjct: 82 QTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIE 141
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVDK D+V+RWINEAQEA +SD++MV YHAL V+
Sbjct: 142 RYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHALGVLY 201
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAXXLAEE 849
R+NDRL+ K++ K ++ ++S + C+ IR A L +E
Sbjct: 202 HLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKE 242
>AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein.
Length = 871
Score = 256 bits (626), Expect = 1e-67
Identities = 126/221 (57%), Positives = 156/221 (70%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++PR+C+HILTKILYLLNQGE T EAT+ FFA T+LFQS D
Sbjct: 22 LEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTRLFQSND 81
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAIE
Sbjct: 82 QTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAIE 141
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVDK D+V+RWINEAQEA +SD++MV YHAL V+
Sbjct: 142 RYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQYHALGVLY 201
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAXXLAEE 849
R+NDRL+ K++ K ++ ++S + C+ IR A L +E
Sbjct: 202 HLRKNDRLAVSKMLNKFTKSGLKSQFAYCMLIRIASRLLKE 242
>AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ12872 fis, clone NT2RP2003760, highly similar to
COATOMER GAMMA SUBUNIT. ).
Length = 799
Score = 186 bits (452), Expect = 1e-46
Identities = 93/169 (55%), Positives = 117/169 (69%)
Frame = +1
Query: 343 TKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITD 522
T+LFQS D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD
Sbjct: 2 TRLFQSNDQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITD 61
Query: 523 STMLQAIERYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVS 702
TMLQAIERYMKQAIVDK D+V+RWINEAQEA +SD++MV
Sbjct: 62 GTMLQAIERYMKQAIVDKVSSVSSSALVSSLHMMKISYDVVKRWINEAQEAASSDNIMVQ 121
Query: 703 YHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAXXLAEE 849
YHAL V+ R+NDRL+ K++ K ++ +S + C+ IR A L +E
Sbjct: 122 YHALGVLYHLRKNDRLAVSKMLNKFTKSGPKSQFAYCMLIRIASRLLKE 170
>BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein.
Length = 699
Score = 78.2 bits (184), Expect = 4e-14
Identities = 36/71 (50%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +1
Query: 649 RWINEAQEAMTSDHVMVSYHALAVVAGARRNDRLSTVKLITKLARTPVRSPYTLCLQIRF 828
RW+NEAQEA +SD++MV YHAL ++ R+NDRL+ K+I+K+ R ++SP+ C+ IR
Sbjct: 1 RWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAVNKMISKVTRHGLKSPFAYCMMIRV 60
Query: 829 A-XXLAEEDPS 858
A L EED S
Sbjct: 61 ASKQLEEEDGS 71
>BC014146-1|AAH14146.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +1
Query: 259 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 435
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 436 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 573
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AL137856-9|CAI19074.1| 262|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 262
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +1
Query: 259 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 435
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 436 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 573
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AL137856-5|CAI19072.1| 739|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit protein.
Length = 739
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +1
Query: 259 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 435
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 436 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 573
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AF092094-1|AAD20448.1| 739|Homo sapiens AP-4 adaptor complex beta4
subunit protein.
Length = 739
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +1
Query: 259 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 435
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 31 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 85
Query: 436 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 573
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 127
>AB209817-1|BAD93054.1| 771|Homo sapiens adaptor-related protein
complex 4, beta 1 subunit variant protein.
Length = 771
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/106 (21%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Frame = +1
Query: 259 HILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDV-II 435
+++ +++ + QG +++ +F K + D+V ++LVYL + +P+ D+ ++
Sbjct: 63 NVIQRVIRYMTQGLDMS-----GVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALL 117
Query: 436 VTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIERYMKQAIVD 573
++L KD + + R A+R++CS+ + ++ Y++Q I++
Sbjct: 118 AINTLCKDCSDPNPMVRGLALRSMCSL----RMPGVQEYIQQPILN 159
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 313 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 489
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 490 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 582
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 313 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 489
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 490 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 582
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 313 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 489
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 490 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 582
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 38.3 bits (85), Expect = 0.036
Identities = 22/91 (24%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 313 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 489
+ A+++F A K SK++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 74 KNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRA 133
Query: 490 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 582
+A+R L SI ++ + +K+A D +P
Sbjct: 134 SALRVLSSIRVPIIVPIMMLAIKEASADLSP 164
>U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein.
Length = 1081
Score = 37.9 bits (84), Expect = 0.048
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 313 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 489
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 490 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 582
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein
complex 3, beta 2 subunit protein.
Length = 1082
Score = 37.9 bits (84), Expect = 0.048
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 313 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 489
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 490 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 582
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B
subunit protein.
Length = 1082
Score = 37.9 bits (84), Expect = 0.048
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 313 QEATDIFFATTKLFQSKDVVLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRP 489
+ A+D+F A K K++ +++LVY+ + + QD+ +++ S+ + + + R
Sbjct: 69 KNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRA 128
Query: 490 AAIRALCSITDSTMLQAIERYMKQAIVDKNP 582
+A+R L SI ++ + +K+A D +P
Sbjct: 129 SALRVLSSIRVPIIVPIMMLAIKEAASDMSP 159
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +1
Query: 349 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 516
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +1
Query: 349 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 516
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +1
Query: 349 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 516
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +1
Query: 349 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 516
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 767 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC105005-1|AAI05006.1| 773|Homo sapiens diacylglycerol kinase,
beta 90kDa protein.
Length = 773
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 720 CCWCXTQR*IIN-CETHYKTSSDTSSLALHTLPPNTLC 830
C WC Q + N C +H K D L H LPP T+C
Sbjct: 339 CVWC--QITLHNKCASHLKPECDCGPLKDHILPPTTIC 374
>AC073258-1|AAS07533.1| 413|Homo sapiens unknown protein.
Length = 413
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 720 CCWCXTQR*IIN-CETHYKTSSDTSSLALHTLPPNTLC 830
C WC Q + N C +H K D L H LPP T+C
Sbjct: 273 CVWC--QITLHNKCASHLKPECDCGPLKDHILPPTTIC 308
>AB018261-1|BAA34438.1| 742|Homo sapiens KIAA0718 protein protein.
Length = 742
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 720 CCWCXTQR*IIN-CETHYKTSSDTSSLALHTLPPNTLC 830
C WC Q + N C +H K D L H LPP T+C
Sbjct: 277 CVWC--QITLHNKCASHLKPECDCGPLKDHILPPTTIC 312
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 349 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 510
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 349 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 510
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 764 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 31.9 bits (69), Expect = 3.1
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +1
Query: 349 LFQSKDVVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 510
L ++ + + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 928 LLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 979
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,273,867
Number of Sequences: 237096
Number of extensions: 2555180
Number of successful extensions: 4707
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 4557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4698
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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