Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_G01
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical pr... 241 5e-64
Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical pr... 241 5e-64
Z93397-8|CAB07716.2| 545|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL132904-27|CAC35854.1| 545|Caenorhabditis elegans Hypothetical... 31 1.4
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 30 1.9
AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical ... 29 3.3
Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical pr... 29 5.8
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical ... 28 7.6
AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z68880-8|CAJ43445.1| 883|Caenorhabditis elegans Hypothetical
protein T14G10.5b protein.
Length = 883
Score = 241 bits (590), Expect = 5e-64
Identities = 119/222 (53%), Positives = 152/222 (68%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++ RKC IL+K++Y++ QGE + EAT+ FF TKL+QSKD
Sbjct: 31 LDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRTEATEAFFGVTKLWQSKD 90
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
V LRR+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D YR AAIRALC ITD+ MLQ IE
Sbjct: 91 VSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAAIRALCKITDTGMLQTIE 150
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVD+N ++VRRW NE QEA++SD+ MV YHALA++
Sbjct: 151 RYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEAVSSDNHMVQYHALALLY 210
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAXXLAEED 852
R NDRL+ KL+ K ++ +RSPY +C IR A +D
Sbjct: 211 QIRANDRLAVNKLVQKFSKNALRSPYAVCYLIRIATRCLVDD 252
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 123 EQSIMKARRDGKEEDSNVFQNLDKTTLLQXGKIF 224
+ S MK + +E NV+ +LDKT++LQ + F
Sbjct: 10 QSSRMKTNKKDEETGGNVYAHLDKTSVLQEARAF 43
>Z68880-7|CAA93095.1| 870|Caenorhabditis elegans Hypothetical
protein T14G10.5a protein.
Length = 870
Score = 241 bits (590), Expect = 5e-64
Identities = 119/222 (53%), Positives = 152/222 (68%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKD 366
L K EAR FN TP++ RKC IL+K++Y++ QGE + EAT+ FF TKL+QSKD
Sbjct: 18 LDKTSVLQEARAFNETPINARKCCFILSKLIYIIQQGESIGRTEATEAFFGVTKLWQSKD 77
Query: 367 VVLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAIE 546
V LRR+VYL +KEL+ ++ DVIIVTSSLTKDMTG++D YR AAIRALC ITD+ MLQ IE
Sbjct: 78 VSLRRMVYLAVKELAEVSDDVIIVTSSLTKDMTGREDLYRAAAIRALCKITDTGMLQTIE 137
Query: 547 RYMKQAIVDKNPXXXXXXXXXXXXXXXXXPDLVRRWINEAQEAMTSDHVMVSYHALAVVA 726
RYMKQAIVD+N ++VRRW NE QEA++SD+ MV YHALA++
Sbjct: 138 RYMKQAIVDRNSAISSSAIVSSIHLMRKSSEVVRRWANEVQEAVSSDNHMVQYHALALLY 197
Query: 727 GARRNDRLSTVKLITKLARTPVRSPYTLCLQIRFAXXLAEED 852
R NDRL+ KL+ K ++ +RSPY +C IR A +D
Sbjct: 198 QIRANDRLAVNKLVQKFSKNALRSPYAVCYLIRIATRCLVDD 239
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MKARRDGKEEDSNVFQNLDKTTLLQXGKIF 224
MK + +E NV+ +LDKT++LQ + F
Sbjct: 1 MKTNKKDEETGGNVYAHLDKTSVLQEARAF 30
>Z93397-8|CAB07716.2| 545|Caenorhabditis elegans Hypothetical
protein ZC482.2 protein.
Length = 545
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEA 321
+I+ Y + +YFN +HP C+ I T+I+ LLN G EA
Sbjct: 314 MIQYSTYNKRQYFNFENLHPDFCVTI-TEIVALLNLGISTENIEA 357
>AL132904-27|CAC35854.1| 545|Caenorhabditis elegans Hypothetical
protein ZC482.2 protein.
Length = 545
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 187 LIKQPFYXEARYFNSTPVHPRKCIHILTKILYLLNQGEELTTQEA 321
+I+ Y + +YFN +HP C+ I T+I+ LLN G EA
Sbjct: 314 MIQYSTYNKRQYFNFENLHPDFCVTI-TEIVALLNLGISTENIEA 357
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/102 (19%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 256 IHILTKILYLLNQGEELTTQEATDIFFATTKLFQSKDVVLRRLVYL---CIKELSP---M 417
I L K++Y++ GE+ T+Q + + S + L++++ + C+ + +
Sbjct: 39 IEALKKLIYMILNGEK-TSQSM--LMYVIRFCLPSNEHTLKKVLLIFWECVPKTDSNGKL 95
Query: 418 AQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 543
++I+V + KD+ ++ R + +R LC + + +L+ +
Sbjct: 96 LHEMILVCDAYRKDLQHPNEFVRGSTLRFLCKLREPELLEPL 137
>AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical
protein ZK105.3 protein.
Length = 802
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 353 NSFVVAKNISVASCVVNSSPWFSK*SIFVKIWMHFLGCT 237
NS+V+ KN++ VVN+ PW +F +++ + T
Sbjct: 486 NSYVLKKNLNTVLIVVNNYPWKYGMGLFQRLYEPYFAST 524
>Z83219-1|CAB05694.1| 322|Caenorhabditis elegans Hypothetical
protein C31C9.2 protein.
Length = 322
Score = 28.7 bits (61), Expect = 5.8
Identities = 27/134 (20%), Positives = 55/134 (41%), Gaps = 1/134 (0%)
Frame = -2
Query: 797 ERTGVRASFVMSFTVDNLSLRLAPATTAKAW*ETIT*SEVMASCASFIQRRTKSGTVADR 618
++ G+ + T D L + L T +E++A+ A ++ ++GT D
Sbjct: 23 KQNGIEVTVKTKQTKDELLVTLPQHDAVIVRSATKITAELLAASAGKLKLVGRAGTGVDN 82
Query: 617 CKAETSAADPTAGFLSTIACFMYLS-IACSIVLSVMLHKARMAAGRYSSSLPVMSFVSEE 441
++A+ + A + + C+++LS+ H + AA + F+ EE
Sbjct: 83 IDVPAASANKILVMNTPQANSRSAAELTCTLILSLSRHVPQAAASMKAGKWARKDFMGEE 142
Query: 440 VTMITSCAIGLNSL 399
V T +GL +
Sbjct: 143 VYGRTLAVLGLGRI 156
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 120 KEQSIMKARRDGKEEDSNVFQNLDKTTLLQXGKIFQLYTRASEKMHP 260
++ S+++ARRD + ++ ++LD T L G+ +T S M P
Sbjct: 224 RDGSLLRARRDDSNDITSRRKSLDTRTSLTTGQASNRHTSLSAGMRP 270
>AF016660-2|AAB66048.2| 811|Caenorhabditis elegans Hypothetical
protein F53A10.2c protein.
Length = 811
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2
Query: 686 SEVMASCASF-IQRRTKSGTVADRCKAETSAADPTAGFLSTIAC 558
+EV++SC F I RT+ GT+ + A A P+A ++ + C
Sbjct: 289 TEVISSCDHFRIILRTRKGTIHEIVSATALADRPSASRMAKLLC 332
>AF016660-1|AAK71368.1| 742|Caenorhabditis elegans Hypothetical
protein F53A10.2a protein.
Length = 742
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -2
Query: 686 SEVMASCASF-IQRRTKSGTVADRCKAETSAADPTAGFLSTIAC 558
+EV++SC F I RT+ GT+ + A A P+A ++ + C
Sbjct: 220 TEVISSCDHFRIILRTRKGTIHEIVSATALADRPSASRMAKLLC 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,725,108
Number of Sequences: 27780
Number of extensions: 418069
Number of successful extensions: 1088
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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