Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F24
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0097 - 27666456-27666719,27666837-27667022,27667233-276673...    30   2.9  
07_03_0417 - 17970032-17970132,17970290-17970635                       29   6.8  

>05_07_0097 -
           27666456-27666719,27666837-27667022,27667233-27667387,
           27667488-27667620,27667718-27667908,27668078-27668513
          Length = 454

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +1

Query: 289 LYY*IIXLQGQMMMAPEAWSLLVGDRTSVLHISDWKTKL 405
           LY  +I + G +M+A  AW  L   + SV  I  W+T L
Sbjct: 97  LYIVVIPVAGLIMLAGMAWMFLPCRKKSVATIGPWRTGL 135


>07_03_0417 - 17970032-17970132,17970290-17970635
          Length = 148

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -2

Query: 385 ICGERTFCPRPGGTRLLVPSSSDPVXILFNNIT 287
           +C  R  CP  GG RL       PV +LF  +T
Sbjct: 103 VCARRRGCPSAGGVRL---PGEKPVSVLFETLT 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,207,684
Number of Sequences: 37544
Number of extensions: 365962
Number of successful extensions: 658
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)