Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F22
         (874 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy...    29   1.1  
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo...    27   3.5  
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar...    27   3.5  
SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subu...    27   4.6  
SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subun...    27   4.6  
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy...    26   8.1  

>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 537

 Score = 28.7 bits (61), Expect = 1.1
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -1

Query: 562 YVIQLCIFSSLHCTVFLKLSFFYNLNHSVRPLDAIKHISFLLSNLCCRVRMCL*ISDK 389
           + I  C+F +LHC V +   F Y  +H +  +  I+ +      L   VR CL  ++K
Sbjct: 199 FPIVQCVFFTLHCAVLIMKQFSY--SHHMGYISEIRILHNEYEKLLKFVRECLNSTEK 254


>SPBC13G1.08c |ash2||Ash2-trithorax family
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 652

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 16/55 (29%), Positives = 28/55 (50%)
 Frame = +1

Query: 181 SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQ 345
           SH  L++    RP +  Y++ +   D +   C I +E     +PNT ++T D+ Q
Sbjct: 585 SHRPLVLGSNVRPVSERYNE-QIAEDVL---CDILDEIDYAEDPNTSSVTIDVPQ 635


>SPAC2F7.03c |pom1||DYRK family protein kinase
            Pom1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1087

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -1

Query: 115  DRILSRIIRPSNRASNFIRSRNK-PNLKGSL 26
            D  L     PSN+ASN +RS +K PNL  +L
Sbjct: 1037 DHTLPSPKEPSNQASNLVRSSDKFPNLLTNL 1067


>SPAPB8E5.02c |rpn502|rpn5, rpn5-b|19S proteasome regulatory subunit
           Rpn502|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 443

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 714 HMQAVVNVCTLFKPIFDTFVVF*FHVKYR--LEHIVC 818
           H  A ++VC  ++ ++DT VV     K++  LE++VC
Sbjct: 224 HDDAYLDVCKYYRAVYDTAVVQEDPEKWKEILENVVC 260


>SPAC1420.03 |rpn501|rpn5-a, rpn5|19S proteasome regulatory subunit
           Rpn501|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 443

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 714 HMQAVVNVCTLFKPIFDTFVVF*FHVKYR--LEHIVC 818
           H  A ++VC  ++ ++DT VV     K++  LE++VC
Sbjct: 224 HDDAYLDVCKYYRAVYDTAVVQEDPEKWKEILENVVC 260


>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 573

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 763 SNIGLNNVHTLTTACMWDGLIVFTL 689
           S IG  NV  +   CMW G I+FTL
Sbjct: 509 SIIGYGNVMWIFCGCMWGG-ILFTL 532


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,410,713
Number of Sequences: 5004
Number of extensions: 72366
Number of successful extensions: 180
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)