Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_F21
(871 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0885 + 6966700-6966979,6967930-6968110,6968224-6968365,696... 46 5e-05
05_06_0144 - 25973635-25973801,25973878-25973947,25974049-259741... 44 2e-04
03_02_0927 - 12452262-12452428,12452538-12452607,12452689-124528... 41 0.001
02_02_0367 + 9496893-9497022,9498262-9498442,9498519-9498660,949... 41 0.001
06_03_0181 + 17618888-17619125,17621503-17621683,17621765-176219... 39 0.005
01_06_0631 + 30732091-30732292,30732690-30732870,30732994-307331... 38 0.008
03_06_0184 - 32188778-32188947,32189104-32189173,32189332-321894... 36 0.032
01_01_0255 + 2079112-2079196,2079334-2079514,2079712-2079853,207... 36 0.056
05_07_0022 - 27103367-27103533,27103783-27103852,27104074-271042... 34 0.17
04_04_1534 + 34200538-34200589,34200677-34200857,34201701-342018... 34 0.17
03_01_0347 - 2730242-2730425,2730541-2730692,2730782-2730940,273... 29 4.8
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 29 4.8
04_01_0480 + 6279576-6279755,6279863-6279988,6280074-6280151,628... 28 8.5
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 28 8.5
01_06_0336 + 28533251-28533350,28533548-28533641,28533760-285339... 28 8.5
>01_01_0885 +
6966700-6966979,6967930-6968110,6968224-6968365,
6968448-6968517,6968617-6968783
Length = 279
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 511 LRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDAN 690
LR++ L D+ L LW L+ +G+C N +TL+ + ++ L T+P YE + Q+D+
Sbjct: 187 LRQIALGRDIKKFLIVIAGLWLLSVLGSCCNFLTLVYIVFVVLHTVPILYEKYEDQIDSY 246
Query: 691 LELARAKINE----ITAKVRAAVPLG 756
E +I + + AKV + VP G
Sbjct: 247 GEKGWVEIKKQYAVLDAKVLSKVPRG 272
>05_06_0144 -
25973635-25973801,25973878-25973947,25974049-25974190,
25974647-25974827,25975248-25975443
Length = 251
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/73 (34%), Positives = 40/73 (54%)
Frame = +1
Query: 511 LRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDAN 690
LR + DL L V LW L+ +G+C N +TL + ++ L+T+P YE + Q+DA
Sbjct: 159 LREIGQGHDLKKFLIVVVGLWVLSVLGSCCNFLTLFYIVFMVLYTVPVLYEKYEDQIDAF 218
Query: 691 LELARAKINEITA 729
E A ++ + A
Sbjct: 219 GEKAMIELKKYYA 231
>03_02_0927 -
12452262-12452428,12452538-12452607,12452689-12452830,
12452937-12453117,12454068-12454203
Length = 231
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 562 VLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVD 684
+LLW L+ +G + ITL G IAL T+P Y N+ QVD
Sbjct: 156 LLLWLLSVIGNFCSSITLAYFGTIALVTIPALYSKNQEQVD 196
>02_02_0367 +
9496893-9497022,9498262-9498442,9498519-9498660,
9498757-9498826,9498920-9499089
Length = 230
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Frame = +1
Query: 511 LRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVD-- 684
LR + L DL+ L V LW L+ +G+ + +TL + + L T+P Y + +VD
Sbjct: 137 LREISLGHDLMKFLGVIVALWILSEIGSLCDFLTLFYVAVLMLHTVPILYHKYQDKVDHF 196
Query: 685 ---ANLELARAKINEITAKVRAAVPLG 756
A++EL+R + + + AKV + +P G
Sbjct: 197 AGKAHVELSR-QYSVLDAKVLSKIPRG 222
>06_03_0181 +
17618888-17619125,17621503-17621683,17621765-17621906,
17622002-17622071,17622162-17622307,17623382-17623948,
17624558-17624641,17624723-17624797,17625049-17625217,
17625395-17625586,17625662-17626053
Length = 751
Score = 39.1 bits (87), Expect = 0.005
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Frame = +1
Query: 514 RRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANL 693
R + L DL L V LW L+ VG+C + +TLI + + L T+P Y+ + +VD
Sbjct: 174 REIALGHDLKKFLGVIVALWVLSEVGSCCDFLTLIYVAVLMLHTVPILYDKYQDKVDHFA 233
Query: 694 ELARAK----INEITAKVRAAVPLG 756
A ++ + AKV + +P G
Sbjct: 234 GRAHSEACKHYEVLDAKVLSKIPRG 258
>01_06_0631 +
30732091-30732292,30732690-30732870,30732994-30733135,
30733228-30733297,30733383-30733549
Length = 253
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 568 LWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKINEITA 729
LW L+ +G+ N +TL + ++AL+T+P YE + +VDA E A + + A
Sbjct: 180 LWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKKYYA 233
>03_06_0184 -
32188778-32188947,32189104-32189173,32189332-32189473,
32189559-32189739,32189857-32190051,32190782-32190795,
32190815-32190864,32191493-32191519
Length = 282
Score = 36.3 bits (80), Expect = 0.032
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 568 LWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVD----ANLELARAKINEITAKV 735
LW +G N +T+I +G+++ TLP YE + QVD L L R + ++ V
Sbjct: 208 LWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRDQYQKLDQGV 267
Query: 736 RAAVPLG 756
+ +P G
Sbjct: 268 LSKIPKG 274
>01_01_0255 +
2079112-2079196,2079334-2079514,2079712-2079853,
2079934-2080003,2080140-2080303
Length = 213
Score = 35.5 bits (78), Expect = 0.056
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 568 LWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELA----RAKINEITAKV 735
L+ + + +CF+ +TL+ L + TLP YE +++VD + A R+ + +I + V
Sbjct: 141 LFIASVIASCFSSLTLLYLVVLGTMTLPVMYENYESEVDHLVSTAVHDLRSHVGDIDSGV 200
Query: 736 RAAVPLGXXA 765
+P G A
Sbjct: 201 FKKIPRGRGA 210
>05_07_0022 -
27103367-27103533,27103783-27103852,27104074-27104215,
27104372-27104552,27104654-27104756
Length = 220
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 568 LWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVD 684
LW L +G + TL+ +G++ TLP YE + +VD
Sbjct: 147 LWILAVIGETCSFTTLLYVGFLCALTLPALYERYETEVD 185
>04_04_1534 +
34200538-34200589,34200677-34200857,34201701-34201842,
34201963-34202032,34202169-34202302
Length = 192
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +1
Query: 550 LKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDANLELARAKIN 717
+K ++LW ++Y+G FN +TLI + +P YE + QVD + +A + ++
Sbjct: 124 IKVILILWVVSYIGMLFNFLTLI-------YIVPPLYEKYQDQVDEKIGMAHSVLS 172
>03_01_0347 -
2730242-2730425,2730541-2730692,2730782-2730940,
2734144-2734618,2734713-2734775,2734870-2735078
Length = 413
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 556 FGVLLWCLTYVGACFNGITLIILGW 630
FG+ WC+ Y G NG T+ W
Sbjct: 292 FGLKFWCIVYSGFACNGFTVFAQLW 316
>02_02_0011 +
6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 67 ARRP*QTPLVSHSHALRKVSACPSQHPRYAPSSTP-MPGSTHSDCTPK 207
A RP +TP S +H+L +VS P Q +S P M GS HS K
Sbjct: 75 ASRP-ETPRSSGAHSLSRVSLRPPQQVLSIRTSLPTMVGSQHSPAGKK 121
>04_01_0480 +
6279576-6279755,6279863-6279988,6280074-6280151,
6280847-6280972,6281244-6281345,6281416-6281490,
6281852-6281975,6283005-6283107,6283546-6283617,
6283662-6283788,6284125-6284180,6284438-6284453
Length = 394
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 528 GGGPGGLAEVRRAAVVPHVRGGVLQRDHAHHPRLDS 635
GG GG A+ R + HV G V Q HHP+L S
Sbjct: 292 GGSAGGGADGSRYWLAIHVVGVVRQTFTNHHPKLCS 327
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 52 RRESRARRP*QTPLVSHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTP 204
RR+ + P +PL+ ++ ALR + + PR P P P TH+ P
Sbjct: 374 RRKPPSPSPPSSPLIENTSALRSTTTTDTTIPR-NPFVQPPPPPTHTHGPP 423
>01_06_0336 +
28533251-28533350,28533548-28533641,28533760-28533901,
28534107-28534212,28534345-28534511
Length = 202
Score = 28.3 bits (60), Expect = 8.5
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +1
Query: 508 ELRRLFLV---EDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQ 678
+L+R L +V +K L L+ +G+ + +L+ +G++ TLP Y+ K +
Sbjct: 106 DLKRFLLFWTNNQIVYDIKVVGSLLVLSAIGSSCSLTSLLYIGFLCAHTLPVLYQRYKTE 165
Query: 679 VD 684
VD
Sbjct: 166 VD 167
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,525,352
Number of Sequences: 37544
Number of extensions: 253107
Number of successful extensions: 1289
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2444475072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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