Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_F21
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 31 0.81
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 31 0.81
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 31 0.81
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 31 0.81
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 30 2.5
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 30 2.5
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 30 2.5
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 30 2.5
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 30 2.5
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 30 2.5
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 30 2.5
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 30 2.5
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024755-4|AAK84603.1| 225|Caenorhabditis elegans Hypothetical ... 29 4.3
AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical ... 29 5.7
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr... 28 10.0
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical protein
W06A7.3f protein.
Length = 2488
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = +1
Query: 508 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDA 687
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D
Sbjct: 2393 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDP 2452
Query: 688 NLELARAKINEITAKVRAAVP 750
+L + + + +P
Sbjct: 2453 HLATISGHLKNVQNIIDEKLP 2473
>Z78066-8|CAE48546.1| 204|Caenorhabditis elegans Hypothetical
protein W06A7.3e protein.
Length = 204
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = +1
Query: 508 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDA 687
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D
Sbjct: 109 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDP 168
Query: 688 NLELARAKINEITAKVRAAVP 750
+L + + + +P
Sbjct: 169 HLATISGHLKNVQNIIDEKLP 189
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 354 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSV 443
FR++K V ++KT+ HPF +L ++++
Sbjct: 58 FRVFKKVEAQIKKTDSEHPFSEILAQDLTL 87
>Z78066-7|CAE48544.1| 570|Caenorhabditis elegans Hypothetical
protein W06A7.3d protein.
Length = 570
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = +1
Query: 508 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDA 687
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D
Sbjct: 475 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDP 534
Query: 688 NLELARAKINEITAKVRAAVP 750
+L + + + +P
Sbjct: 535 HLATISGHLKNVQNIIDEKLP 555
Score = 31.9 bits (69), Expect = 0.61
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Frame = +3
Query: 156 TILDPH--AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 329
+IL H AW D + + P V +IYWR+
Sbjct: 356 SILKHHGDAWIDFKTVPPCVLDVIYWRDAKKSAIVLSLALLVLFVLAKYPLLTVVTYSLL 415
Query: 330 XXXXXXXXFRLYKNVLQAVQKTNDGHPFKWLLEAEVSV 443
FR++K V ++KT+ HPF +L ++++
Sbjct: 416 LALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTL 453
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = +1
Query: 508 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDA 687
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D
Sbjct: 2389 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDP 2448
Query: 688 NLELARAKINEITAKVRAAVP 750
+L + + + +P
Sbjct: 2449 HLATISGHLKNVQNIIDEKLP 2469
Score = 31.9 bits (69), Expect = 0.61
Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Frame = +3
Query: 156 TILDPH--AWFDPQRLHPEVESLIYWRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 329
+IL H AW D + + P V +IYWR+
Sbjct: 2270 SILKHHGDAWIDFKTVPPCVLDVIYWRDAKKSAIVLSLALLVLFVLAKYPLLTVVTYSLL 2329
Query: 330 XXXXXXXXFRLYKNVLQAVQKTNDGHPFKWLLEAEVSV 443
FR++K V ++KT+ HPF +L ++++
Sbjct: 2330 LALGAAAGFRVFKKVEAQIKKTDSEHPFSEILAQDLTL 2367
>Z78066-5|CAB01523.1| 222|Caenorhabditis elegans Hypothetical
protein W06A7.3b protein.
Length = 222
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = +1
Query: 508 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDA 687
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D
Sbjct: 127 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDP 186
Query: 688 NLELARAKINEITAKVRAAVP 750
+L + + + +P
Sbjct: 187 HLATISGHLKNVQNIIDEKLP 207
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 354 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSV 443
FR++K V ++KT+ HPF +L ++++
Sbjct: 76 FRVFKKVEAQIKKTDSEHPFSEILAQDLTL 105
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/81 (35%), Positives = 51/81 (62%)
Frame = +1
Query: 508 ELRRLFLVEDLVDSLKFGVLLWCLTYVGACFNGITLIILGWIALFTLPKAYEMNKAQVDA 687
+L++L VE ++S+KFG++LW LTY+ + F+G TL ILG + +F++PK YE N+ +D
Sbjct: 2512 KLKKLVFVESPLESIKFGLVLWSLTYIASWFSGFTLAILGLLGVFSVPKVYESNQEAIDP 2571
Query: 688 NLELARAKINEITAKVRAAVP 750
+L + + + +P
Sbjct: 2572 HLATISGHLKNVQNIIDEKLP 2592
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 354 FRLYKNVLQAVQKTNDGHPFKWLLEAEVSV 443
FR++K V ++KT+ HPF +L ++++
Sbjct: 2461 FRVFKKVEAQIKKTDSEHPFSEILAQDLTL 2490
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 661 EMNKAQVDANLELARAKINEITAK 732
E KA++DAN+E RAKI+EI K
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGK 2616
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 661 EMNKAQVDANLELARAKINEITAK 732
E KA++DAN+E RAKI+EI K
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGK 2616
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 661 EMNKAQVDANLELARAKINEITAK 732
E KA++DAN+E RAKI+EI K
Sbjct: 407 EKLKAEIDANIEETRAKISEIAGK 430
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 661 EMNKAQVDANLELARAKINEITAK 732
E KA++DAN+E RAKI+EI K
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGK 2616
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 31.5 bits (68), Expect = 0.81
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 661 EMNKAQVDANLELARAKINEITAK 732
E KA++DAN+E RAKI+EI K
Sbjct: 2593 EKLKAEIDANIEETRAKISEIAGK 2616
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 97 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 216
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 181 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 220
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 97 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 216
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 1821 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1860
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 97 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 216
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 1922 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1961
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 130 CPSQHPRYAPSSTPMPGSTHSDCTP 204
CP + P+ A S+ PGSTH + +P
Sbjct: 188 CPPKVPKSASSNCVFPGSTHDESSP 212
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 130 CPSQHPRYAPSSTPMPGSTHSDCTP 204
CP + P+ A S+ PGSTH + +P
Sbjct: 292 CPPKVPKSASSNCVFPGSTHDESSP 316
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 130 CPSQHPRYAPSSTPMPGSTHSDCTP 204
CP + P+ A S+ PGSTH + +P
Sbjct: 343 CPPKVPKSASSNCVFPGSTHDESSP 367
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 130 CPSQHPRYAPSSTPMPGSTHSDCTP 204
CP + P+ A S+ PGSTH + +P
Sbjct: 343 CPPKVPKSASSNCVFPGSTHDESSP 367
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 97 SHSHALRKVSACPSQHPRYAPSSTPMPGSTHSDCTPKWSR 216
SHSH+ S P Y+ S P S+HS TP+ S+
Sbjct: 1922 SHSHSHHPTSQQQQHQPMYSTSPLISPRSSHSYYTPRSSQ 1961
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -2
Query: 639 QRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQ 526
Q+Y ++ PV+ RP V++ Q H E Q+ ++L Q
Sbjct: 267 QQYKPPPQQQPPVQMRPPVQQPQQNHQEEQQNAELLMQ 304
>AC024755-4|AAK84603.1| 225|Caenorhabditis elegans Hypothetical
protein Y34B4A.9 protein.
Length = 225
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 147 SLCTILDPHAWFDPQRLHPEVES 215
++ +I DP WFDP+ EVE+
Sbjct: 40 AVLSISDPQPWFDPENFRKEVET 62
>AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical
protein Y53H1A.5 protein.
Length = 281
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2
Query: 648 QREQRYPTEDDERDPVEARPHVREAPQQHAELQR 547
+RE R ED R P+E + ++ E+ +QHA +R
Sbjct: 162 RREMRQKMEDSGRLPLERQKYMHESRRQHALKRR 195
>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical protein
H08M01.2b protein.
Length = 1341
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 689 LASTCALFIS*AFGSVNSAIQP--RMMSVIPLKHAPTYVRHHSSTPN 555
LA+ A+ S A+ VN A+ ++ PLK PT+ + SSTP+
Sbjct: 898 LATPEAVDFSPAYSLVNDAVHTVIQVNGSTPLKSPPTFHSYESSTPD 944
>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical protein
H08M01.2a protein.
Length = 1320
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = -3
Query: 689 LASTCALFIS*AFGSVNSAIQP--RMMSVIPLKHAPTYVRHHSSTPN 555
LA+ A+ S A+ VN A+ ++ PLK PT+ + SSTP+
Sbjct: 898 LATPEAVDFSPAYSLVNDAVHTVIQVNGSTPLKSPPTFHSYESSTPD 944
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,310,615
Number of Sequences: 27780
Number of extensions: 185614
Number of successful extensions: 890
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -