Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F20
         (875 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    33   1.4  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    33   1.4  
Z98051-2|CAI42861.1|  878|Homo sapiens PHD finger protein 8 prot...    31   4.1  
Z98051-1|CAI42860.1| 1060|Homo sapiens PHD finger protein 8 prot...    31   4.1  
BC053861-1|AAH53861.1| 1024|Homo sapiens PHD finger protein 8 pr...    31   4.1  
AL732374-7|CAI41582.1|  952|Homo sapiens PHD finger protein 8 pr...    31   4.1  
AL732374-6|CAI41581.1|  658|Homo sapiens PHD finger protein 8 pr...    31   4.1  
AL732374-2|CAI41577.1|  878|Homo sapiens PHD finger protein 8 pr...    31   4.1  
AL732374-1|CAI41576.1| 1060|Homo sapiens PHD finger protein 8 pr...    31   4.1  
AL589872-1|CAH70724.1| 1060|Homo sapiens PHD finger protein 8 pr...    31   4.1  
AK021696-1|BAB13877.1|  790|Homo sapiens protein ( Homo sapiens ...    31   4.1  
AB029034-1|BAA83063.1| 1084|Homo sapiens KIAA1111 protein protein.     31   4.1  
BC042172-1|AAH42172.1|  184|Homo sapiens ZMYM6 protein protein.        31   5.5  
AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens ...    31   5.5  
AK128391-1|BAC87416.1|  334|Homo sapiens protein ( Homo sapiens ...    30   9.6  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = -3

Query: 666 GSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 493
           GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 581 GSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 33.1 bits (72), Expect = 1.4
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = -3

Query: 666 GSEQESARGSFQGETPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSWP 493
           GS+Q S+     G++P    +  GFA+ +   +F +A  GG +   +P + P Y S P
Sbjct: 582 GSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639


>Z98051-2|CAI42861.1|  878|Homo sapiens PHD finger protein 8
           protein.
          Length = 878

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 621 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 666


>Z98051-1|CAI42860.1| 1060|Homo sapiens PHD finger protein 8
           protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 657 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 702


>BC053861-1|AAH53861.1| 1024|Homo sapiens PHD finger protein 8
           protein.
          Length = 1024

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 621 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 666


>AL732374-7|CAI41582.1|  952|Homo sapiens PHD finger protein 8
           protein.
          Length = 952

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 524 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 569


>AL732374-6|CAI41581.1|  658|Homo sapiens PHD finger protein 8
           protein.
          Length = 658

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 384 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 429


>AL732374-2|CAI41577.1|  878|Homo sapiens PHD finger protein 8
           protein.
          Length = 878

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 621 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 666


>AL732374-1|CAI41576.1| 1060|Homo sapiens PHD finger protein 8
           protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 657 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 702


>AL589872-1|CAH70724.1| 1060|Homo sapiens PHD finger protein 8
           protein.
          Length = 1060

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 657 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 702


>AK021696-1|BAB13877.1|  790|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11634 fis, clone HEMBA1004275, moderately
           similar to Homo sapiens PHD-finger protein (GRC5) mRNA.
           ).
          Length = 790

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 520 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 565


>AB029034-1|BAA83063.1| 1084|Homo sapiens KIAA1111 protein protein.
          Length = 1084

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 575 LKSEVAKPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP-SFSLRE 709
           +   + K   T+ I    P KLPRA  CSDP   R PG   F + E
Sbjct: 681 IDERLGKEKATLIIRPKFPRKLPRAKPCSDPNRVREPGEVEFDIEE 726


>BC042172-1|AAH42172.1|  184|Homo sapiens ZMYM6 protein protein.
          Length = 184

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 593 KPDRTIKIPGVSPWKLPRALSCSDPAAYRIPGP 691
           +P      P +  W  PR+ +C+  A+Y +PGP
Sbjct: 94  RPGPPTTCPPMRRWSSPRSSACAAAASYAVPGP 126


>AK092711-1|BAC03955.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35392 fis, clone SKNSH2000716. ).
          Length = 149

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 20/39 (51%), Positives = 20/39 (51%)
 Frame = -3

Query: 555 RQGGGAYGKTPATRPFYGSWPFAGLLLTCSFLRYPPDSV 439
           RQ  G  G   A R F  S P  GLL  CS LR  PDSV
Sbjct: 69  RQHFGIPGYPEAARDFSSS-PAPGLLTLCSRLRAKPDSV 106


>AK128391-1|BAC87416.1|  334|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46534 fis, clone THYMU3037052, weakly  similar
           to Homo sapiens HIV TAT specific factor 1 (HTATSF1). ).
          Length = 334

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 638 LPRALSCSDPAAYRIPGPSFSLREAWXCFLIAHAVGISXXCXG 766
           LP + S S  +A ++PG +      W  F   + VG+S  C G
Sbjct: 178 LPPSSSDSLTSASQVPGTADVCHHTWLIFFFFYRVGVSPCCPG 220


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,431,924
Number of Sequences: 237096
Number of extensions: 2636007
Number of successful extensions: 7235
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7233
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)