Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_F17
(896 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 126 6e-28
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 107 5e-22
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 77 8e-13
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 73 1e-11
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 58 3e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 48 4e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.049
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 40 0.065
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.086
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.46
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 35 2.4
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 34 5.7
UniRef50_A2YKD5 Cluster: Putative uncharacterized protein; n=2; ... 33 9.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 126 bits (305), Expect = 6e-28
Identities = 74/121 (61%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Frame = +3
Query: 489 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLESSLVRSPVPT 668
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLE+ P+
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEA-------PS 54
Query: 669 LPLTGIPVRL----SPFGKRGAFS*LTL*VSQFG--CRSXAPSWAVCTNPPFXPTAAPYP 830
L P RL PF R A+ L CRS APSWAVCTNPPF PTAAPYP
Sbjct: 55 CALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYP 114
Query: 831 V 833
V
Sbjct: 115 V 115
Score = 59.7 bits (138), Expect = 1e-07
Identities = 32/72 (44%), Positives = 34/72 (47%)
Frame = +2
Query: 632 PGKLPRALSCSDPAAYRNTCPPFSLREAWRFLIAHAVGIXXXXXXXXXKLGCVHEPPVXP 811
P + P P +TCPPFSLREAWRFLIAHAVGI PP P
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
Query: 812 DRCXLSGTIVLS 847
TIVLS
Sbjct: 109 TAAPYPVTIVLS 120
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 107 bits (256), Expect = 5e-22
Identities = 69/135 (51%), Positives = 80/135 (59%)
Frame = +3
Query: 321 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 500
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 501 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLESSLVRSPVPTLPLT 680
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL + + LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAP--SCALLFLPF- 130
Query: 681 GIPVRLSPFGKRGAF 725
G+PV +G+ +F
Sbjct: 131 GLPVSFRCYGRGFSF 145
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 76.6 bits (180), Expect = 8e-13
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3
Query: 507 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPL 635
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 72.9 bits (171), Expect = 1e-11
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = -1
Query: 806 ERGVRAHSPAWSXRPTPELRYLQREL*ESATLPEGRKADRYSGKRQGRNRRAHEGAFQGE 627
ERGVRA+SPAWS RP P ++ P+G+KA++ SGKRQGRNRRAHEGA +
Sbjct: 25 ERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEK 84
Query: 626 TP 621
+P
Sbjct: 85 SP 86
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 497 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 384
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 58.0 bits (134), Expect = 3e-07
Identities = 43/93 (46%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Frame = +3
Query: 582 VRGGETRQDYK----DTRRFPLESS-----LVRSPVPTLPLTGIPVRLSPFGKRGAFS*L 734
VR GETRQD K PL S + R PVP L G V LS G +
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAG-SVALSHSSHSGISA-- 79
Query: 735 TL*VSQFGCRSXAPSWAVCTNPPFXPTAAPYPV 833
CRS APSWAV NPPF PTAAPYPV
Sbjct: 80 -------RCRSFAPSWAVSKNPPFSPTAAPYPV 105
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 297 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 464
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 52.8 bits (121), Expect = 1e-05
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +1
Query: 676 LPEYLSAFLPSGSVALSHSSRCRYLSS 756
L YLSAFLPSGSVALSHSSRCRYLSS
Sbjct: 10 LTGYLSAFLPSGSVALSHSSRCRYLSS 36
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 47.6 bits (108), Expect = 4e-04
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 396 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 569
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 570 IDAQVRGGETRQDYKDTRRFPLES 641
I Q + +T+ +YK T FPL+S
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQS 105
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 416 HSKAVIRLSTESGDNAGKNM 475
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.049
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 295 SALMNRPTRGERRFAYW 345
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 40.3 bits (90), Expect = 0.065
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -1
Query: 806 ERGVRAHSPAWSXRPTP 756
ERGVRAHSPAWS RPTP
Sbjct: 25 ERGVRAHSPAWSERPTP 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.086
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 367 ERGSGRAPNTQTASPRALADSLMQ 296
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.46
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +1
Query: 109 MIRYIDEFGQTTTRMQ 156
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 35.1 bits (77), Expect = 2.4
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1
Query: 806 ERGVRAHSPAWSXRPTP 756
ERGV A+SPAWS RPTP
Sbjct: 25 ERGVLAYSPAWSERPTP 41
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 506 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 384
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 178 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 345
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 258 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 94
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 788 VHEPPVXPDRCXLSGTIVLSXXG*KRXIPP-GSSTG 892
+HEPPV PDRC LSG L + + P ++TG
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATG 36
>UniRef50_A2YKD5 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 97
Score = 33.1 bits (72), Expect = 9.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 584 QRWRN--PTGL*RYQAFPPGKLPRALSCSDPAAYRNTCPP 697
Q+WR+ PTG + +FP G LP A S PA+ R P
Sbjct: 28 QQWRSTGPTGKLCFCSFPAGALPPAASAGQPASDRQPATP 67
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 835,390,587
Number of Sequences: 1657284
Number of extensions: 17234389
Number of successful extensions: 46494
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 44245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46460
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81161904978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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