Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F17
         (896 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    32   2.5  
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    32   2.5  
BC050463-1|AAH50463.1|  953|Homo sapiens conserved nuclear prote...    31   4.3  
BC001584-1|AAH01584.1|  718|Homo sapiens LOC124245 protein protein.    31   4.3  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -1

Query: 722 SATLPEGRKA--DRYSGKRQGRNRRAHEGAFQGETPGIFIVLSGFATSDLSVDFCDARQG 549
           S+TL + R    +R  G  +G  + +      G++P    +  GFA+ +   +F +A  G
Sbjct: 561 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 620

Query: 548 GGAYGKTPATRPFYGSWP 495
           G +   +P + P Y S P
Sbjct: 621 GSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 32.3 bits (70), Expect = 2.5
 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = -1

Query: 722 SATLPEGRKA--DRYSGKRQGRNRRAHEGAFQGETPGIFIVLSGFATSDLSVDFCDARQG 549
           S+TL + R    +R  G  +G  + +      G++P    +  GFA+ +   +F +A  G
Sbjct: 562 SSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNEMEEFAEAEDG 621

Query: 548 GGAYGKTPATRPFYGSWP 495
           G +   +P + P Y S P
Sbjct: 622 GSSVPPSPYSTPSYLSVP 639


>BC050463-1|AAH50463.1|  953|Homo sapiens conserved nuclear protein
            NHN1 protein.
          Length = 953

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 20/70 (28%), Positives = 26/70 (37%)
 Frame = -3

Query: 831  PDKXQRSG*TGGSCTQPSLERTTYTRTEIPTA*AMRKRHASRREKGGQVFR*AAGSEQES 652
            PD+  R   +GG    P  ER     ++ P A A RKR  S + K         G   + 
Sbjct: 853  PDRGSRDRKSGGRLGSPKPERQRGQNSKAPAAPADRKRQLSPQSKSSSKVTSVPGKASDP 912

Query: 651  ARGSFPGGNA 622
               S   G A
Sbjct: 913  GAASTKSGKA 922


>BC001584-1|AAH01584.1|  718|Homo sapiens LOC124245 protein protein.
          Length = 718

 Score = 31.5 bits (68), Expect = 4.3
 Identities = 20/70 (28%), Positives = 26/70 (37%)
 Frame = -3

Query: 831 PDKXQRSG*TGGSCTQPSLERTTYTRTEIPTA*AMRKRHASRREKGGQVFR*AAGSEQES 652
           PD+  R   +GG    P  ER     ++ P A A RKR  S + K         G   + 
Sbjct: 618 PDRGSRDRKSGGRLGSPKPERQRGQNSKAPAAPADRKRQLSPQSKSSSKVTSVPGKASDP 677

Query: 651 ARGSFPGGNA 622
              S   G A
Sbjct: 678 GAASTKSGKA 687


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,876,856
Number of Sequences: 237096
Number of extensions: 2791309
Number of successful extensions: 8087
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8084
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)