Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F17
         (896 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   8.6  
AY118312-1|AAM48341.1|  836|Drosophila melanogaster GH26429p pro...    29   8.6  
AE014297-2501|AAN13770.3|  836|Drosophila melanogaster CG7125-PD...    29   8.6  
AE014297-2500|AAF55537.4|  836|Drosophila melanogaster CG7125-PC...    29   8.6  
AE014297-2499|AAN13769.3|  836|Drosophila melanogaster CG7125-PB...    29   8.6  
AE014297-2498|AAF55536.4|  836|Drosophila melanogaster CG7125-PA...    29   8.6  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   8.6  

>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 306 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 401
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AY118312-1|AAM48341.1|  836|Drosophila melanogaster GH26429p
           protein.
          Length = 836

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 573 DAQVRGGETRQDYKDTRRFPLESSLVRSPVPTLPLTGIPVRLSPFGKRG 719
           D+ V GGET +   D +    +SS   SP   +PL  I   +    KRG
Sbjct: 352 DSSVSGGETSKSSSDGQSEQSQSSTSSSPSANIPLMRIVQSVKHTKKRG 400


>AE014297-2501|AAN13770.3|  836|Drosophila melanogaster CG7125-PD,
           isoform D protein.
          Length = 836

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 573 DAQVRGGETRQDYKDTRRFPLESSLVRSPVPTLPLTGIPVRLSPFGKRG 719
           D+ V GGET +   D +    +SS   SP   +PL  I   +    KRG
Sbjct: 352 DSSVSGGETSKSSSDGQSEQSQSSTSSSPSANIPLMRIVQSVKHTKKRG 400


>AE014297-2500|AAF55537.4|  836|Drosophila melanogaster CG7125-PC,
           isoform C protein.
          Length = 836

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 573 DAQVRGGETRQDYKDTRRFPLESSLVRSPVPTLPLTGIPVRLSPFGKRG 719
           D+ V GGET +   D +    +SS   SP   +PL  I   +    KRG
Sbjct: 352 DSSVSGGETSKSSSDGQSEQSQSSTSSSPSANIPLMRIVQSVKHTKKRG 400


>AE014297-2499|AAN13769.3|  836|Drosophila melanogaster CG7125-PB,
           isoform B protein.
          Length = 836

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 573 DAQVRGGETRQDYKDTRRFPLESSLVRSPVPTLPLTGIPVRLSPFGKRG 719
           D+ V GGET +   D +    +SS   SP   +PL  I   +    KRG
Sbjct: 352 DSSVSGGETSKSSSDGQSEQSQSSTSSSPSANIPLMRIVQSVKHTKKRG 400


>AE014297-2498|AAF55536.4|  836|Drosophila melanogaster CG7125-PA,
           isoform A protein.
          Length = 836

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +3

Query: 573 DAQVRGGETRQDYKDTRRFPLESSLVRSPVPTLPLTGIPVRLSPFGKRG 719
           D+ V GGET +   D +    +SS   SP   +PL  I   +    KRG
Sbjct: 352 DSSVSGGETSKSSSDGQSEQSQSSTSSSPSANIPLMRIVQSVKHTKKRG 400


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 306 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 401
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,999,394
Number of Sequences: 53049
Number of extensions: 822254
Number of successful extensions: 2011
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2011
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)