Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_F14
(876 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069498-1|AAL39643.1| 617|Drosophila melanogaster LD22396p pro... 60 5e-09
AF133260-1|AAD38513.1| 617|Drosophila melanogaster vacuolar pro... 60 5e-09
AE014298-2872|AAN09503.1| 617|Drosophila melanogaster CG12230-P... 60 5e-09
AE014298-2871|AAF48972.1| 617|Drosophila melanogaster CG12230-P... 60 5e-09
>AY069498-1|AAL39643.1| 617|Drosophila melanogaster LD22396p
protein.
Length = 617
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +3
Query: 672 KLQNDFRENYIEGDTSCIYNAAQALRTIQQFYGIVPRVFGKGQAAKQVWDLLCRLXKEEQ 851
++ N FR+ ++GDTS +Y AA L +Q+ YG +P+++GKG+ A +VW+ +L ++E+
Sbjct: 156 EMPNAFRDVSVDGDTSSLYQAAVGLVQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGRDER 215
Query: 852 V--PGNKG 869
G+KG
Sbjct: 216 TLYNGDKG 223
Score = 52.0 bits (119), Expect = 1e-06
Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +2
Query: 395 MFLLKPG-SLPNITVKHIIFISRPKLSLMDLVADYILSIRAKQTAPVEFHLFFVPRKSEL 571
+ LKP LP V +++++ RP+++LM+ +A ++ + + A ++H+ F PR+S L
Sbjct: 64 LLALKPELHLPR-EVANVVYVMRPRVALMEQLAAHVKA-GGRAAAGRQYHILFAPRRSCL 121
Query: 572 CKVHLTNRGVVSNM-TIEEFKCDIIPFESDVMSLE 673
C L GV+ + IEE + +P + D++S+E
Sbjct: 122 CVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSME 156
Score = 37.1 bits (82), Expect = 0.032
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 226 GGRLNVALLQETMRTELLNLLQQYSGPKVTIWDDWLAGPVGL 351
G R+N+ LLQE ELL L + G KV + D+ + GP+ L
Sbjct: 9 GQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDL 50
>AF133260-1|AAD38513.1| 617|Drosophila melanogaster vacuolar
protein sorting protein33 protein.
Length = 617
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +3
Query: 672 KLQNDFRENYIEGDTSCIYNAAQALRTIQQFYGIVPRVFGKGQAAKQVWDLLCRLXKEEQ 851
++ N FR+ ++GDTS +Y AA L +Q+ YG +P+++GKG+ A +VW+ +L ++E+
Sbjct: 156 EMPNAFRDVSVDGDTSSLYQAAVGLVQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGRDER 215
Query: 852 V--PGNKG 869
G+KG
Sbjct: 216 TLYNGDKG 223
Score = 52.0 bits (119), Expect = 1e-06
Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +2
Query: 395 MFLLKPG-SLPNITVKHIIFISRPKLSLMDLVADYILSIRAKQTAPVEFHLFFVPRKSEL 571
+ LKP LP V +++++ RP+++LM+ +A ++ + + A ++H+ F PR+S L
Sbjct: 64 LLALKPELHLPR-EVANVVYVMRPRVALMEQLAAHVKA-GGRAAAGRQYHILFAPRRSCL 121
Query: 572 CKVHLTNRGVVSNM-TIEEFKCDIIPFESDVMSLE 673
C L GV+ + IEE + +P + D++S+E
Sbjct: 122 CVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSME 156
Score = 37.1 bits (82), Expect = 0.032
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 226 GGRLNVALLQETMRTELLNLLQQYSGPKVTIWDDWLAGPVGL 351
G R+N+ LLQE ELL L + G KV + D+ + GP+ L
Sbjct: 9 GQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDL 50
>AE014298-2872|AAN09503.1| 617|Drosophila melanogaster CG12230-PB,
isoform B protein.
Length = 617
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +3
Query: 672 KLQNDFRENYIEGDTSCIYNAAQALRTIQQFYGIVPRVFGKGQAAKQVWDLLCRLXKEEQ 851
++ N FR+ ++GDTS +Y AA L +Q+ YG +P+++GKG+ A +VW+ +L ++E+
Sbjct: 156 EMPNAFRDVSVDGDTSSLYQAAVGLVQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGRDER 215
Query: 852 V--PGNKG 869
G+KG
Sbjct: 216 TLYNGDKG 223
Score = 52.0 bits (119), Expect = 1e-06
Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +2
Query: 395 MFLLKPG-SLPNITVKHIIFISRPKLSLMDLVADYILSIRAKQTAPVEFHLFFVPRKSEL 571
+ LKP LP V +++++ RP+++LM+ +A ++ + + A ++H+ F PR+S L
Sbjct: 64 LLALKPELHLPR-EVANVVYVMRPRVALMEQLAAHVKA-GGRAAAGRQYHILFAPRRSCL 121
Query: 572 CKVHLTNRGVVSNM-TIEEFKCDIIPFESDVMSLE 673
C L GV+ + IEE + +P + D++S+E
Sbjct: 122 CVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSME 156
Score = 37.1 bits (82), Expect = 0.032
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 226 GGRLNVALLQETMRTELLNLLQQYSGPKVTIWDDWLAGPVGL 351
G R+N+ LLQE ELL L + G KV + D+ + GP+ L
Sbjct: 9 GQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDL 50
>AE014298-2871|AAF48972.1| 617|Drosophila melanogaster CG12230-PA,
isoform A protein.
Length = 617
Score = 59.7 bits (138), Expect = 5e-09
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Frame = +3
Query: 672 KLQNDFRENYIEGDTSCIYNAAQALRTIQQFYGIVPRVFGKGQAAKQVWDLLCRLXKEEQ 851
++ N FR+ ++GDTS +Y AA L +Q+ YG +P+++GKG+ A +VW+ +L ++E+
Sbjct: 156 EMPNAFRDVSVDGDTSSLYQAAVGLVQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGRDER 215
Query: 852 V--PGNKG 869
G+KG
Sbjct: 216 TLYNGDKG 223
Score = 52.0 bits (119), Expect = 1e-06
Identities = 29/95 (30%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +2
Query: 395 MFLLKPG-SLPNITVKHIIFISRPKLSLMDLVADYILSIRAKQTAPVEFHLFFVPRKSEL 571
+ LKP LP V +++++ RP+++LM+ +A ++ + + A ++H+ F PR+S L
Sbjct: 64 LLALKPELHLPR-EVANVVYVMRPRVALMEQLAAHVKA-GGRAAAGRQYHILFAPRRSCL 121
Query: 572 CKVHLTNRGVVSNM-TIEEFKCDIIPFESDVMSLE 673
C L GV+ + IEE + +P + D++S+E
Sbjct: 122 CVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSME 156
Score = 37.1 bits (82), Expect = 0.032
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 226 GGRLNVALLQETMRTELLNLLQQYSGPKVTIWDDWLAGPVGL 351
G R+N+ LLQE ELL L + G KV + D+ + GP+ L
Sbjct: 9 GQRVNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDL 50
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,553,023
Number of Sequences: 53049
Number of extensions: 697279
Number of successful extensions: 1714
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1714
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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