Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_F13
(868 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB70B0 Cluster: PREDICTED: similar to exosome co... 290 3e-77
UniRef50_UPI0000D55D29 Cluster: PREDICTED: similar to Exosome co... 290 3e-77
UniRef50_UPI00015B5DF5 Cluster: PREDICTED: similar to SCL75 prot... 272 8e-72
UniRef50_Q06265 Cluster: Exosome complex exonuclease RRP45; n=40... 248 1e-64
UniRef50_UPI0000E45C6E Cluster: PREDICTED: similar to SCL75 prot... 238 1e-61
UniRef50_UPI00006610C8 Cluster: Exosome complex exonuclease RRP4... 219 7e-56
UniRef50_Q55BJ2 Cluster: Putative uncharacterized protein; n=1; ... 194 2e-48
UniRef50_Q8T4A9 Cluster: AT07738p; n=2; Sophophora|Rep: AT07738p... 190 3e-47
UniRef50_Q7RZN0 Cluster: Putative uncharacterized protein NCU003... 190 5e-47
UniRef50_O74918 Cluster: Putative exosome complex exonuclease RR... 190 5e-47
UniRef50_Q9M209 Cluster: Nucleolar autoantigen-like protein; n=8... 184 3e-45
UniRef50_Q5KKS4 Cluster: Exosome complex exonuclease rrp45, puta... 178 1e-43
UniRef50_Q20128 Cluster: Putative uncharacterized protein; n=3; ... 177 4e-43
UniRef50_Q05636 Cluster: Exosome complex exonuclease RRP45; n=9;... 173 5e-42
UniRef50_Q2TZL0 Cluster: Exosomal 3'-5' exoribonuclease complex;... 156 6e-37
UniRef50_Q6CFB7 Cluster: Yarrowia lipolytica chromosome B of str... 153 7e-36
UniRef50_Q23PW9 Cluster: 3' exoribonuclease family, domain 1 con... 146 5e-34
UniRef50_Q4PFY5 Cluster: Putative uncharacterized protein; n=1; ... 142 1e-32
UniRef50_A5K2Q0 Cluster: Exosome complex exonuclease, putative; ... 140 4e-32
UniRef50_Q8ID62 Cluster: Exosome complex exonuclease, putative; ... 130 4e-29
UniRef50_A5DZH2 Cluster: Putative uncharacterized protein; n=1; ... 129 8e-29
UniRef50_O26778 Cluster: Probable exosome complex exonuclease 2;... 126 5e-28
UniRef50_A7AUY6 Cluster: 3' exoribonuclease family, domain 1 con... 124 4e-27
UniRef50_Q4UFY0 Cluster: Exosome complex exonuclease, putative; ... 115 2e-24
UniRef50_A1RXQ5 Cluster: 3' exoribonuclease; n=1; Thermofilum pe... 114 3e-24
UniRef50_Q64CA6 Cluster: TRNA nucleotidyltransferase; n=4; envir... 113 4e-24
UniRef50_Q4D743 Cluster: Ribosomal RNA processing protein 45, pu... 113 5e-24
UniRef50_Q59X53 Cluster: Potential exosome component Rrp45p; n=1... 113 7e-24
UniRef50_A3H8A6 Cluster: 3' exoribonuclease; n=1; Caldivirga maq... 112 1e-23
UniRef50_UPI000049A2AB Cluster: exosome complex exonuclease; n=1... 110 4e-23
UniRef50_Q8U0M0 Cluster: Probable exosome complex exonuclease 2;... 110 4e-23
UniRef50_Q8TGX5 Cluster: Probable exosome complex exonuclease 2;... 110 4e-23
UniRef50_Q2NEX4 Cluster: Putative exosome complex, exonuclease 2... 107 5e-22
UniRef50_Q5CYG9 Cluster: RRP45-like archaeo-eukaryotic exosomal ... 104 3e-21
UniRef50_Q4QBI9 Cluster: Exosome complex exonuclease RRP45 homol... 103 8e-21
UniRef50_UPI000051A59D Cluster: PREDICTED: similar to Exosome co... 101 3e-20
UniRef50_Q8ZVN0 Cluster: Probable exosome complex exonuclease 2;... 99 1e-19
UniRef50_Q6L224 Cluster: Ribonuclease PH; n=2; Thermoplasmatales... 99 2e-19
UniRef50_Q9UXC0 Cluster: Probable exosome complex exonuclease 2;... 99 2e-19
UniRef50_A0D7R2 Cluster: Chromosome undetermined scaffold_40, wh... 98 2e-19
UniRef50_Q7Q0D9 Cluster: ENSANGP00000011759; n=2; Culicidae|Rep:... 98 3e-19
UniRef50_Q96B26 Cluster: Exosome complex exonuclease RRP43; n=37... 97 5e-19
UniRef50_Q583T6 Cluster: Ribosomal RNA processing protein 45; n=... 94 4e-18
UniRef50_Q9YC05 Cluster: Probable exosome complex exonuclease 2;... 93 6e-18
UniRef50_Q10205 Cluster: Putative exosome complex exonuclease RR... 91 3e-17
UniRef50_Q15024 Cluster: Exosome complex exonuclease RRP42; n=36... 87 4e-16
UniRef50_Q29QQ9 Cluster: IP10364p; n=8; Endopterygota|Rep: IP103... 83 1e-14
UniRef50_Q2QT85 Cluster: 3' exoribonuclease family, domain 1 con... 81 5e-14
UniRef50_A0RXU0 Cluster: RNase PH-related exoribonuclease; n=1; ... 80 8e-14
UniRef50_Q9ZUI4 Cluster: T2K10.14 protein; n=10; Magnoliophyta|R... 78 3e-13
UniRef50_Q5DA97 Cluster: SJCHGC04772 protein; n=1; Schistosoma j... 77 4e-13
UniRef50_Q5KMZ6 Cluster: Opa-interacting protein OIP2, putative;... 77 8e-13
UniRef50_A2DPV1 Cluster: Nucleolar autoantigen-like protein, put... 75 2e-12
UniRef50_Q4P345 Cluster: Putative uncharacterized protein; n=1; ... 73 1e-11
UniRef50_UPI0000E49695 Cluster: PREDICTED: hypothetical protein;... 72 2e-11
UniRef50_Q8SVE0 Cluster: Putative uncharacterized protein ECU06_... 70 9e-11
UniRef50_A2F1P7 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_Q54CU6 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_UPI0000498B14 Cluster: exosome complex exonuclease; n=1... 65 2e-09
UniRef50_Q5BWV4 Cluster: SJCHGC04363 protein; n=1; Schistosoma j... 64 3e-09
UniRef50_Q4UI91 Cluster: Exosome ribonuclease PH (Rrp42 homologu... 60 5e-08
UniRef50_Q9SSE1 Cluster: MLP3.20 protein; n=5; core eudicotyledo... 60 7e-08
UniRef50_A7SQ50 Cluster: Predicted protein; n=1; Nematostella ve... 59 1e-07
UniRef50_Q7QP16 Cluster: GLP_83_5565_6509; n=1; Giardia lamblia ... 57 7e-07
UniRef50_A7ARR1 Cluster: Putative uncharacterized protein; n=1; ... 56 9e-07
UniRef50_Q4YPT7 Cluster: Exoribonuclease PH, putative; n=5; Plas... 56 2e-06
UniRef50_Q8MPG3 Cluster: Exosome-associated protein 2; n=3; Tryp... 52 2e-05
UniRef50_O45424 Cluster: Putative uncharacterized protein exos-7... 46 0.001
UniRef50_Q01CP9 Cluster: Exosc8 protein; n=2; Ostreococcus|Rep: ... 43 0.012
UniRef50_A3FQP8 Cluster: Exoribonuclease PH, putative; n=2; Cryp... 41 0.047
UniRef50_Q54VM4 Cluster: Putative uncharacterized protein; n=1; ... 40 0.11
UniRef50_UPI0000E4A2CF Cluster: PREDICTED: similar to Exosc7 pro... 39 0.14
UniRef50_A6NT19 Cluster: Putative uncharacterized protein; n=1; ... 39 0.19
UniRef50_Q4Q1B7 Cluster: Exosome complex exonuclease RRP41, puta... 39 0.19
UniRef50_A0RXU1 Cluster: RNase PH; n=1; Cenarchaeum symbiosum|Re... 38 0.44
UniRef50_Q5XQ91 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_Q7QPU9 Cluster: GLP_16_6871_9435; n=1; Giardia lamblia ... 36 1.3
UniRef50_A2FQU8 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_A5KBP5 Cluster: Putative uncharacterized protein; n=3; ... 35 3.1
UniRef50_Q24GF7 Cluster: 3' exoribonuclease family, domain 1 con... 34 4.1
UniRef50_Q92HV7 Cluster: Polyribonucleotide nucleotidyltransfera... 34 4.1
UniRef50_Q6F498 Cluster: Putative transcriptional regulator, sim... 34 5.4
UniRef50_Q00YJ4 Cluster: Exosomal 3'-5' exoribonuclease complex,... 34 5.4
UniRef50_O96177 Cluster: Putative uncharacterized protein PFB041... 34 5.4
UniRef50_Q2S1P1 Cluster: Polyribonucleotide nucleotidyltransfera... 33 7.1
UniRef50_A5TWD5 Cluster: Possible replication protein; n=1; Fuso... 33 7.1
UniRef50_Q9SP08 Cluster: Exonuclease RRP41; n=5; Magnoliophyta|R... 33 7.1
UniRef50_Q95QG7 Cluster: Putative uncharacterized protein; n=2; ... 33 9.4
UniRef50_Q4Q4S6 Cluster: Exosome-associated protein 2, putative;... 33 9.4
UniRef50_Q5K9V3 Cluster: Putative uncharacterized protein; n=2; ... 33 9.4
UniRef50_Q6L223 Cluster: Ribonuclease PH; n=2; Thermoplasmatales... 33 9.4
>UniRef50_UPI0000DB70B0 Cluster: PREDICTED: similar to exosome
component 9; n=1; Apis mellifera|Rep: PREDICTED: similar
to exosome component 9 - Apis mellifera
Length = 396
Score = 290 bits (712), Expect = 3e-77
Identities = 122/226 (53%), Positives = 173/226 (76%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 298
M++ LSNCEKNF+ K V QG RLDGR+ E R + I F S +G C+V LG+T+++++VT
Sbjct: 1 MKEILLSNCEKNFVNKSVEQGIRLDGRSLLEARPVKIYFASNWGSCMVLLGQTRVIAQVT 60
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
C++ QPK RPNEG++ INVELNPMAA F++ RQ+++++ + R LEKCY+DSKCIDLES
Sbjct: 61 CDIQQPKTSRPNEGMLHINVELNPMAAQHFDSGRQSEISILISRQLEKCYQDSKCIDLES 120
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
LCI+ ++KVW+LR++I V+NHDGNL +CASIATLA+++HF RPD T +G+ +I+H +EK
Sbjct: 121 LCIIADKKVWNLRVDINVINHDGNLIDCASIATLAALSHFHRPDVTSNGEDIIVHPFSEK 180
Query: 659 DPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINT 796
DP+P LYHYPVC +F + + + DP +LEE + + GIN+
Sbjct: 181 DPLPLTLYHYPVCVSFITFESGNTVMDPTYLEERIGVAQLTLGINS 226
>UniRef50_UPI0000D55D29 Cluster: PREDICTED: similar to Exosome
complex exonuclease RRP45 (Exosome component 9)
(Polymyositis/scleroderma autoantigen 1) (Autoantigen
PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome associated a...; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Exosome complex exonuclease RRP45
(Exosome component 9) (Polymyositis/scleroderma
autoantigen 1) (Autoantigen PM/Scl 1)
(Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome associated a... - Tribolium castaneum
Length = 389
Score = 290 bits (712), Expect = 3e-77
Identities = 125/228 (54%), Positives = 177/228 (77%), Gaps = 1/228 (0%)
Frame = +2
Query: 113 NKMRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSE 292
+K+R+T ++NCE+ F+ K +S+ RLDGR+F+E R L++ FG ++G C VSLG TK+L++
Sbjct: 2 SKVRETLITNCERKFLMKCLSEWRRLDGRSFDEFRPLELKFGKQWGSCYVSLGNTKVLAQ 61
Query: 293 VTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDL 472
+CE+ QPK RP+EGI+ IN+ELNP+AAP FEA RQ++L+V L RLLEKC KDSK +DL
Sbjct: 62 TSCEIQQPKSSRPSEGILNINIELNPLAAPHFEAGRQSELSVQLNRLLEKCVKDSKAVDL 121
Query: 473 ESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLT 652
ESLCI EKVW+L+++I VLNH+GN+ +CASIA LAS+ HF RPD T DG+ IIH+
Sbjct: 122 ESLCIKTNEKVWALKVDINVLNHEGNILDCASIAMLASLTHFRRPDVTCDGEEFIIHSYQ 181
Query: 653 EKDPIPTVLYHYPVCTTFALYS-NDILLSDPNFLEESVCTSNTEEGIN 793
++DPIPTV++HYPVC T+A+++ + +L+DP+ LEE + G+N
Sbjct: 182 QRDPIPTVIHHYPVCITYAIFNGGEYILADPSLLEEGSADAMLTIGLN 229
>UniRef50_UPI00015B5DF5 Cluster: PREDICTED: similar to SCL75
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to SCL75 protein - Nasonia vitripennis
Length = 412
Score = 272 bits (667), Expect = 8e-72
Identities = 115/225 (51%), Positives = 164/225 (72%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 298
M++T +S CEKNF+ K + R+DGR E R L I+FG+ +GCC+VSLG+T+ ++V+
Sbjct: 1 MKETFISICEKNFVNKAIQTDTRIDGRTLLEPRPLKINFGTNWGCCVVSLGQTRAAAQVS 60
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
C++ QPK RPNEG++ +NVELNP+AA FE+ RQ++ + R LEK K+S+C+DLES
Sbjct: 61 CDIQQPKASRPNEGMLHVNVELNPLAAQHFESGRQSEAAALINRQLEKSLKESRCVDLES 120
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
LCIV ++KVW++R+++ ++NHDGNL +CASIA LA++ HF RPD T G+ VIIH TEK
Sbjct: 121 LCIVADKKVWNIRVDVSIINHDGNLIDCASIAALAALMHFHRPDVTSTGEEVIIHPFTEK 180
Query: 659 DPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGIN 793
DP+P LYH+PVC +F + N + DP++LEE V + GIN
Sbjct: 181 DPLPLTLYHHPVCISFITFENGKTVVDPSYLEERVGAAILTLGIN 225
>UniRef50_Q06265 Cluster: Exosome complex exonuclease RRP45; n=40;
Eumetazoa|Rep: Exosome complex exonuclease RRP45 - Homo
sapiens (Human)
Length = 439
Score = 248 bits (608), Expect = 1e-64
Identities = 108/216 (50%), Positives = 154/216 (71%), Gaps = 1/216 (0%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 298
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HF RPD + GD V ++T E+
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEER 180
Query: 659 DPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESV 763
DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 181 DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV 216
>UniRef50_UPI0000E45C6E Cluster: PREDICTED: similar to SCL75
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to SCL75 protein - Strongylocentrotus
purpuratus
Length = 437
Score = 238 bits (583), Expect = 1e-61
Identities = 110/223 (49%), Positives = 154/223 (69%), Gaps = 1/223 (0%)
Frame = +2
Query: 128 TCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEV 307
T LSN E++FI K + + RLDGR + R+ I FG E GCC+V +G+T+IL++V+CEV
Sbjct: 2 TALSNLEEDFILKAIEESKRLDGRQPYDYRRTKIEFGVERGCCMVHMGDTRILAQVSCEV 61
Query: 308 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 487
+PK+ RPNEG +F+N+EL+PMA+ FEA R +D + L RLLE+ KDS+ +D+ESLCI
Sbjct: 62 VEPKENRPNEGQLFVNLELSPMASTTFEAGRLSDYGIELNRLLERTVKDSRAVDVESLCI 121
Query: 488 VVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPI 667
V EKVW +R+++ VLNHDGN+ + A +A LA+++HF RPD T G+ V IH+ ++DP+
Sbjct: 122 VAGEKVWKIRLDVHVLNHDGNILDSACLAALAALSHFRRPDVTVIGESVTIHSPQDRDPV 181
Query: 668 PTVLYHYPVCTTFALY-SNDILLSDPNFLEESVCTSNTEEGIN 793
P ++H PVC TFA Y LL DP EE V G+N
Sbjct: 182 PLNVHHIPVCVTFAFYHKGKRLLVDPTEKEEKVMEGTMVVGMN 224
>UniRef50_UPI00006610C8 Cluster: Exosome complex exonuclease RRP45
(EC 3.1.13.-) (Exosome component 9)
(Polymyositis/scleroderma autoantigen 1) (Autoantigen
PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome-associated autoa; n=1; Takifugu rubripes|Rep:
Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome
component 9) (Polymyositis/scleroderma autoantigen 1)
(Autoantigen PM/Scl 1) (Polymyositis/scleroderma
autoantigen 75 kDa) (PM/Scl-75) (P75
polymyositis-scleroderma overlap syndrome-associated
autoa - Takifugu rubripes
Length = 336
Score = 219 bits (535), Expect = 7e-56
Identities = 90/174 (51%), Positives = 136/174 (78%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 298
M+DT LSN E++F+ K +++ RLDGR + R++ +SFG++YGCC V LGET+++++V+
Sbjct: 1 MKDTPLSNSERDFLLKAIAEKKRLDGRQTYDYRRIKVSFGADYGCCFVELGETRVMAQVS 60
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
CE+ PK+ RPNEGI+F N+EL+PMA+P FEA RQ++L+V L R LE+C ++SKCID ES
Sbjct: 61 CELVAPKESRPNEGILFFNIELSPMASPAFEAGRQSELSVKLNRQLERCLRNSKCIDTES 120
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVII 640
LC+V EKVW +R+++ +LNHDGNL + ASIA + +++HF RPD + G+ + +
Sbjct: 121 LCVVSGEKVWQIRVDVHLLNHDGNLMDAASIAAITALSHFRRPDVSSVGEEITV 174
>UniRef50_Q55BJ2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 526
Score = 194 bits (474), Expect = 2e-48
Identities = 84/210 (40%), Positives = 134/210 (63%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQ 313
+S EK+F+ + + R+DGR N+ R + I FG YG V LG+T++ + +TC++ +
Sbjct: 5 ISKNEKDFVLSSIEKLQRIDGRGVNDMRAIKIEFGKSYGVVEVQLGKTRVFTAITCDIVE 64
Query: 314 PKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVV 493
PK RPNEG N +++PM++ N+ + L R++EK KDS+ ID E+LCI+
Sbjct: 65 PKPERPNEGFYIFNTDISPMSSVSVNVNQPNPMESELGRIIEKGLKDSRAIDTEALCIIS 124
Query: 494 EEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPT 673
KVWS++I I VL+ GNL +CASI+ + ++ HF +PD T G+ IH+L E++P+P
Sbjct: 125 GSKVWSIKIAIHVLDDCGNLLDCASISVMTALIHFRKPDVTVIGNDATIHSLDEREPVPL 184
Query: 674 VLYHYPVCTTFALYSNDILLSDPNFLEESV 763
++H P+ TF + N+I++ DP+ EESV
Sbjct: 185 SIHHTPISITFGFFPNEIMIVDPDTKEESV 214
>UniRef50_Q8T4A9 Cluster: AT07738p; n=2; Sophophora|Rep: AT07738p -
Drosophila melanogaster (Fruit fly)
Length = 412
Score = 190 bits (464), Expect = 3e-47
Identities = 92/214 (42%), Positives = 140/214 (65%), Gaps = 2/214 (0%)
Frame = +2
Query: 137 SNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQP 316
S E++F+Q V Q RLDGR NE+R ++++FG ++G VS+G+TK+L++VTCE+ P
Sbjct: 13 SKPERSFVQLAVKQNQRLDGRRSNESRDVELTFGKDWGSVAVSMGDTKVLAQVTCEMGPP 72
Query: 317 KQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVE 496
RPNEG I +NV L +A ++ L LLE+ ++ S+ IDLESLC+ VE
Sbjct: 73 ALSRPNEGKIHLNVYLGGVAFLDEAHTTHDQRSLKLNSLLERTFRSSRSIDLESLCVAVE 132
Query: 497 EKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPD-FTRDGDRVIIHTLTEKDPIPT 673
+ VW +R+N+ VLNHDGNL + ++IATLA++ HF RPD + +DG+ + I E++ IP
Sbjct: 133 KHVWCIRVNVNVLNHDGNLYDASTIATLAALMHFRRPDVWYKDGE-LRIFKKKEREFIPL 191
Query: 674 VLYHYPVCTTFALYSNDIL-LSDPNFLEESVCTS 772
+ +HYPV T+ +Y + + + DP LEE+ S
Sbjct: 192 LFHHYPVSVTYCVYKSSVQPILDPTLLEENAADS 225
>UniRef50_Q7RZN0 Cluster: Putative uncharacterized protein
NCU00334.1; n=7; Pezizomycotina|Rep: Putative
uncharacterized protein NCU00334.1 - Neurospora crassa
Length = 297
Score = 190 bits (462), Expect = 5e-47
Identities = 93/222 (41%), Positives = 139/222 (62%), Gaps = 3/222 (1%)
Frame = +2
Query: 146 EKNFIQKIVSQGH-RLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQ 322
EK F+ K + RLDGR F++ R L+++FG EYG VSLG+TKIL++ + EV P
Sbjct: 11 EKAFLLKALQDEQIRLDGREFDQYRPLELTFGDEYGVANVSLGKTKILAKASAEVTVPFA 70
Query: 323 IRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEK 502
RP +GI I EL+PMAAP FE NR T+ V L RLLEK + S +D ESLC+V +K
Sbjct: 71 DRPLDGIFTIATELSPMAAPHFEVNRPTETEVLLSRLLEKTVRRSGALDTESLCLVAGQK 130
Query: 503 VWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLY 682
WS+R+++ VL+HDGNLT+ A A +A++ HF +PD + + + ++T E++P+P
Sbjct: 131 CWSVRVDVHVLSHDGNLTDAACFAVVAALRHFRKPDTSMENGVLTVYTPAEREPVPLGWL 190
Query: 683 HYPVCTTFALY--SNDILLSDPNFLEESVCTSNTEEGINTAG 802
H P C T++ + + L D +++EE V ++ +N G
Sbjct: 191 HSPFCVTWSFFGEEGETALLDADWMEEQVRVASVTISLNRHG 232
>UniRef50_O74918 Cluster: Putative exosome complex exonuclease
RRP45; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP45 - Schizosaccharomyces
pombe (Fission yeast)
Length = 291
Score = 190 bits (462), Expect = 5e-47
Identities = 86/224 (38%), Positives = 136/224 (60%), Gaps = 1/224 (0%)
Frame = +2
Query: 125 DTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCE 304
+T L+N K F+ + +G RLDGR ++ R L+I FG EYG VS G T++++ +T E
Sbjct: 6 ETSLNN--KEFVLNSLEKGLRLDGRQLSDFRSLEIQFGKEYGQVDVSFGHTRVMARITTE 63
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 484
+ +P RP +GI I EL P+A FEA R +D + + RL+EK + S +D ESLC
Sbjct: 64 ITKPYTDRPFDGIFSITTELTPLAYSAFEAGRVSDQEIVISRLIEKAVRRSNALDTESLC 123
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDP 664
I+ +K W +R ++ +NHDGNL + A IA +A++ HF RP+ T G+ V +H + E+ P
Sbjct: 124 IISGQKCWHVRASVHFINHDGNLVDAACIAVIAALCHFRRPELTVVGEEVTVHPVEERVP 183
Query: 665 IPTVLYHYPVCTTFALYSN-DILLSDPNFLEESVCTSNTEEGIN 793
+P + H P+C TF+ ++N ++ + D EE +C + +N
Sbjct: 184 VPLSILHMPICVTFSFFNNGELAIVDATLEEEDLCNGSMTITLN 227
>UniRef50_Q9M209 Cluster: Nucleolar autoantigen-like protein; n=8;
Magnoliophyta|Rep: Nucleolar autoantigen-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 438
Score = 184 bits (448), Expect = 3e-45
Identities = 86/225 (38%), Positives = 139/225 (61%), Gaps = 4/225 (1%)
Frame = +2
Query: 146 EKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQI 325
E F++ + R+DGR + RKL I FG EYG V LG+T ++ VT ++ QP +
Sbjct: 15 ESKFVETALQSELRVDGRGLYDYRKLTIKFGKEYGSSEVQLGQTHVMGFVTAQLVQPYKD 74
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
RPNEG + I E +PMA P FE R + V L R++++ ++S+ +D ESLC++ + V
Sbjct: 75 RPNEGSLSIFTEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRAVDTESLCVLAGKMV 134
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFT---RDGDRVIIHTLTEKDPIPTV 676
WS+RI++ +L++ GNL + A+IA LA++ F RPD T +G VIIH L E++P+P +
Sbjct: 135 WSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEVIIHPLEEREPLPLI 194
Query: 677 LYHYPVCTTFALYS-NDILLSDPNFLEESVCTSNTEEGINTAGGL 808
++H P+ TF ++ +I++ DP ++EE+V +N G +
Sbjct: 195 IHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGDI 239
>UniRef50_Q5KKS4 Cluster: Exosome complex exonuclease rrp45,
putative; n=1; Filobasidiella neoformans|Rep: Exosome
complex exonuclease rrp45, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 281
Score = 178 bits (434), Expect = 1e-43
Identities = 84/216 (38%), Positives = 131/216 (60%)
Frame = +2
Query: 146 EKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQI 325
+ F+ +++G RLDGR + R + FG E GC LG+T IL++V+ + +P+
Sbjct: 11 QNEFLLAALAEGKRLDGRLPLQMRDVHYIFGDELGCVECRLGKTAILAQVSATIVKPRDD 70
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
RP EG + IN E+ PMA+ +E R D V + RLLEK + ++ ID E+LCI+ EKV
Sbjct: 71 RPYEGFLLINSEIGPMASSVYENGRPGDDEVMIGRLLEKSIRRTEAIDREALCILAGEKV 130
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYH 685
W LR+ + L+ GNL +CA++A +A++ HF +PD GD VIIH+ E+ P+P ++H
Sbjct: 131 WQLRLTLHFLSDSGNLLDCAALAGMAALKHFRKPDVEVIGDEVIIHSPEERAPVPLAIHH 190
Query: 686 YPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGIN 793
P+C TFA + N + DP+ +E +C+ +N
Sbjct: 191 TPLCLTFAYFENLPPILDPSHVEMMLCSGTLTLTLN 226
>UniRef50_Q20128 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 434
Score = 177 bits (430), Expect = 4e-43
Identities = 81/217 (37%), Positives = 139/217 (64%), Gaps = 1/217 (0%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 298
MR ++NCEK I + + G R D R+ E R + + G+E G I ++G TK+++ V+
Sbjct: 1 MRVQPVTNCEKAVILEALKIGKRFDFRSLEEFRDVKLVVGAEVGTAICTIGNTKVMAAVS 60
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
E+A+P +RP++G+I I+V+L+PMA E +R + L+RLLE +DS+CID+E+
Sbjct: 61 AEIAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSKGMELIRLLELIIRDSRCIDVEA 120
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
LCI +++W +R+++++L+ DG+L +CA +A + ++ HF RP+ T + +I++ EK
Sbjct: 121 LCIRAGKEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNVTLEPHHTLIYSEYEK 180
Query: 659 DPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESVC 766
P+P +YH P+CTT L I++ DP +E+ C
Sbjct: 181 APVPLNIYHMPICTTIGLLDKGQIVVIDPTD-KETAC 216
>UniRef50_Q05636 Cluster: Exosome complex exonuclease RRP45; n=9;
Saccharomycetales|Rep: Exosome complex exonuclease RRP45
- Saccharomyces cerevisiae (Baker's yeast)
Length = 305
Score = 173 bits (421), Expect = 5e-42
Identities = 75/200 (37%), Positives = 127/200 (63%), Gaps = 1/200 (0%)
Frame = +2
Query: 122 RDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTC 301
+D +S E FI + + Q +RLDGR+F++ R ++I+FG E+G V +G TK+ ++C
Sbjct: 3 KDIEISASESKFILEALRQNYRLDGRSFDQFRDVEITFGKEFGDVSVKMGNTKVHCRISC 62
Query: 302 EVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQT-DLTVYLVRLLEKCYKDSKCIDLES 478
++AQP + RP EG+ I+ E++PMA QFE T + V R++EK + S +D+E
Sbjct: 63 QIAQPYEDRPFEGLFVISTEISPMAGSQFENGNITGEDEVLCSRIIEKSVRRSGALDVEG 122
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
LCIV K W++R ++ L+ DG + + IA +A + HF +PD T G+++I+H + E+
Sbjct: 123 LCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVMAGLMHFKKPDITVHGEQIIVHPVNER 182
Query: 659 DPIPTVLYHYPVCTTFALYS 718
+P+P + H P+C TF+ ++
Sbjct: 183 EPVPLGILHIPICVTFSFFN 202
>UniRef50_Q2TZL0 Cluster: Exosomal 3'-5' exoribonuclease complex;
n=8; Eurotiomycetidae|Rep: Exosomal 3'-5'
exoribonuclease complex - Aspergillus oryzae
Length = 292
Score = 156 bits (379), Expect = 6e-37
Identities = 77/228 (33%), Positives = 128/228 (56%), Gaps = 1/228 (0%)
Frame = +2
Query: 122 RDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTC 301
++ LS E++FI + + RLDGR ++ R L++SFG EYG V LG+T ++ ++
Sbjct: 3 KEAPLSIAERDFILNALREDVRLDGRQADQFRPLNVSFGEEYGHVKVQLGKTSLIVRISS 62
Query: 302 EVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESL 481
EV +P RP +GI I +EL M +P +E RQ DL Y+ +L++ + S +D ESL
Sbjct: 63 EVTKPHDDRPFDGIFTIALELTAMGSPAWENGRQGDLETYVSNVLDRVIRHSNALDTESL 122
Query: 482 CIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKD 661
C++ W++R ++ + N+DGNL + A I +A + HF RPD +VI++ + E+
Sbjct: 123 CVLKGVSCWNVRADVHITNYDGNLIDAACIGVMAGLQHFRRPDAVVKDGQVIVYGVDERV 182
Query: 662 PIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESVCTSNTEEGINTAG 802
P+ + H P+ TF + ++ D EE ++ G+N AG
Sbjct: 183 PVALNITHKPLSVTFHTFDEGKRVIVDATRKEEQASEADVVMGLNNAG 230
>UniRef50_Q6CFB7 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 299
Score = 153 bits (370), Expect = 7e-36
Identities = 66/207 (31%), Positives = 124/207 (59%)
Frame = +2
Query: 146 EKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQI 325
++ F+ + + RLDGR+ E R ++++FGS++G +++G+TK++ ++ E+ +P +
Sbjct: 6 DRKFLTEALKVSKRLDGRSMEEQRPMEVTFGSQFGHVELTMGKTKVVVRISAEITKPNER 65
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
RP EGI ++ ++ MA+P FE N Q++ + + +++EK + S +DLESLCIV +K
Sbjct: 66 RPFEGIFVVHTDIGSMASPIFENNHQSEQEIMISQVVEKAVRRSGALDLESLCIVAGKKC 125
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYH 685
W +R ++ L+ DG L + A +A + HF +PD DG V + + E+ P+ + H
Sbjct: 126 WEIRADVHYLDFDGGLVDATCAAVMAGLYHFKKPDVDVDGGAVTVCDMEERHPVALSVLH 185
Query: 686 YPVCTTFALYSNDILLSDPNFLEESVC 766
PV T+ L+ ++ + N +E+ C
Sbjct: 186 LPVSVTYGLF--ELKNDETNEVEKVEC 210
>UniRef50_Q23PW9 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: 3' exoribonuclease family, domain 1 containing
protein - Tetrahymena thermophila SB210
Length = 776
Score = 146 bits (355), Expect = 5e-34
Identities = 80/226 (35%), Positives = 128/226 (56%), Gaps = 3/226 (1%)
Frame = +2
Query: 125 DTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCE 304
D LS E +F+ + RLDGR ++R + + FG+ G V +G+T I+++ T E
Sbjct: 446 DYVLSQNESDFVLSGLENEIRLDGRKLMDSRNIKVIFGNNVGEIEVLIGDTHIITKTTAE 505
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEAN-RQTDLTVYLVRLLEKCYKDSKCIDLESL 481
+ QPKQ +PNEG + NV+L+ M Q N + + +LLEK K SK ID+ESL
Sbjct: 506 IIQPKQEKPNEGSLKFNVDLSSMQDEQQPNNVNIKKYSNEIQKLLEKIIKGSKAIDMESL 565
Query: 482 CIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFT-RDGDRVIIHTLTEK 658
CIV ++VWS+ ++ V+++ GNL + ++ + S+ HF +P + + IH TEK
Sbjct: 566 CIVTNKRVWSINVDSSVVSNGGNLIDAIYLSVIISLLHFRKPYVSVEQQSNIKIH--TEK 623
Query: 659 DPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESVCTSNTEEGIN 793
+P P ++H P+ TFA + + +L+SDP LEE + +N
Sbjct: 624 NPQPLSIHHIPIPFTFAFFKKSTLLVSDPLVLEEQIMEGRLTISVN 669
>UniRef50_Q4PFY5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 327
Score = 142 bits (343), Expect(2) = 1e-32
Identities = 67/202 (33%), Positives = 123/202 (60%), Gaps = 7/202 (3%)
Frame = +2
Query: 137 SNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQP 316
S E +F+ +S G R DGR+F TR +DISFG E G C V++ T++ + V + P
Sbjct: 10 SETESDFVVSCLSDGVRPDGRSFLSTRDVDISFGEELGNCTVAIKGTRVSTCVRATLMPP 69
Query: 317 KQIRPNEGIIFINVELNPMAAPQFE-----ANRQTDL-TVYLVRLLEKCYKDSKCIDLES 478
+ RP EG + I +++PMA +++ AN V RL++K + ++ +D E+
Sbjct: 70 RSDRPYEGFLQITTDISPMAGIEYDSTGGGANSSARAREVLFDRLIDKAVRRTEAVDREA 129
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFT-RDGDRVIIHTLTE 655
LC+V E+VW++ + + +L+ G + A + ++ S+ HF RPD++ +G++V +++L E
Sbjct: 130 LCVVAGEQVWNVHLTVHLLSDTGAALDAAVLCSMLSLRHFRRPDYSIENGNQVRLYSLDE 189
Query: 656 KDPIPTVLYHYPVCTTFALYSN 721
+ P+P ++H P+C TFA++++
Sbjct: 190 RVPVPLAIHHTPLCVTFAIFNH 211
Score = 21.4 bits (43), Expect(2) = 1e-32
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 716 SNDILLSDPNFLEESVCTS 772
S + L DP LEES+ S
Sbjct: 247 STSVALLDPTLLEESLAQS 265
>UniRef50_A5K2Q0 Cluster: Exosome complex exonuclease, putative;
n=4; Plasmodium|Rep: Exosome complex exonuclease,
putative - Plasmodium vivax
Length = 518
Score = 140 bits (339), Expect = 4e-32
Identities = 76/229 (33%), Positives = 129/229 (56%), Gaps = 1/229 (0%)
Frame = +2
Query: 128 TCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEV 307
+C +N NF + + RLDGR F ++R + I F E+G VS+G TK++ ++T E+
Sbjct: 3 SCKNNA--NFFWCNLKKKLRLDGRKFEDSRNISIYFLGEHGNVEVSIGHTKVICKITSEI 60
Query: 308 AQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCI 487
+P RPNEGII +N++++ + ++ +D + + L+E+ K S ++LESLCI
Sbjct: 61 VKPFDKRPNEGIIKVNLDIDSFTNVN-DNSQISDECLEIKNLIERILKSSNLLNLESLCI 119
Query: 488 VVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPI 667
+ +KVW L +NI V+ +DGNL + ++ + + H+ + T D II E +
Sbjct: 120 IPHKKVWCLLVNIIVIENDGNLYDSCYLSAYSGLVHYRNNEVTVDSSGNIIIEEGETNYT 179
Query: 668 PTVLYHYPVCTTFALYS-NDILLSDPNFLEESVCTSNTEEGINTAGGLL 811
P +++ P+ TTFA ++ DI L DP+ EE +S +N G L+
Sbjct: 180 PLSIHNTPILTTFAYFNCEDICLIDPSIHEEEFMSSKLSVALNKNGKLV 228
>UniRef50_Q8ID62 Cluster: Exosome complex exonuclease, putative;
n=1; Plasmodium falciparum 3D7|Rep: Exosome complex
exonuclease, putative - Plasmodium falciparum (isolate
3D7)
Length = 477
Score = 130 bits (314), Expect = 4e-29
Identities = 71/229 (31%), Positives = 123/229 (53%), Gaps = 3/229 (1%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQ 313
+ N N K + + RLDGR F ++R + I+F +YG +S+G TK++ ++T E+ +
Sbjct: 3 ICNNNVNHFWKNIKKNIRLDGRTFEDSRNVCINFLKDYGHVEISIGFTKVICKITSEIVK 62
Query: 314 PKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVV 493
P + EGI+ IN++++ ++ +D + + ++++ K S I+ ESLCI+
Sbjct: 63 PHDRKLKEGILKINLDIDNFIEDNENSDNMSDECLEIKNIIDRVLKTSNIINFESLCIIP 122
Query: 494 EEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPD--FTRDGDRVIIHTLTEKDPI 667
+KVW + INI V+ +DGNLT+ ++ + HF ++GD II E +
Sbjct: 123 GKKVWCICINIMVIENDGNLTDACYLSAYCGLVHFKNHQVRVIKNGD--IIIDKEEINYS 180
Query: 668 PTVLYHYPVCTTFALY-SNDILLSDPNFLEESVCTSNTEEGINTAGGLL 811
P + + P+ TTFA Y +D+ L DP EE +S +N G L+
Sbjct: 181 PLSILNSPIVTTFAYYEEHDVCLIDPCLHEEEFMSSKISIALNKNGNLI 229
>UniRef50_A5DZH2 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 341
Score = 129 bits (312), Expect = 8e-29
Identities = 66/204 (32%), Positives = 114/204 (55%), Gaps = 13/204 (6%)
Frame = +2
Query: 146 EKNFIQKIVSQGHRLDGRNFNETRKLDISFG-SEYGCCIVSLGETKILSEVTCEVAQPKQ 322
EK+F+ + RL+GR+ + R + I +EYG VS G TK+ ++ + +P +
Sbjct: 11 EKHFLHTALKSQLRLNGRSLMQLRDISIYLSPTEYGYVEVSFGSTKLSVRISASITKPYE 70
Query: 323 IRPNEGIIFINVELNPMAAPQFEANR-QTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEE 499
RP EGI IN E++PMA+ +F+ R Q V + R++EK + S +DLE+LCI+ E
Sbjct: 71 DRPFEGIFVINSEISPMASLKFDTTRSQQQDEVLISRIIEKSIRRSNALDLENLCIIAGE 130
Query: 500 KVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPD--FTRDG---------DRVIIHT 646
+ W + ++ N+DG + + AT+ +++HF +PD T G + VIIH
Sbjct: 131 QCWEITADLNFWNYDGGMIDIGCFATMLALSHFKKPDVSITHGGFGGSGNGGVNGVIIHD 190
Query: 647 LTEKDPIPTVLYHYPVCTTFALYS 718
+ E+ P+ + H P+C T++ ++
Sbjct: 191 VNERQPVGLSILHIPICLTYSFFN 214
>UniRef50_O26778 Cluster: Probable exosome complex exonuclease 2;
n=2; Methanobacteriaceae|Rep: Probable exosome complex
exonuclease 2 - Methanobacterium thermoautotrophicum
Length = 271
Score = 126 bits (305), Expect = 5e-28
Identities = 71/220 (32%), Positives = 121/220 (55%), Gaps = 3/220 (1%)
Frame = +2
Query: 158 IQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIR 328
I +++ R+DGR+ +E R + I G G V LG T+I+ V ++ +P
Sbjct: 16 ITDLINNKERIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPFPDT 75
Query: 329 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVW 508
P G+I N EL PMA+P FE + +V L R++++C ++S+ IDLE LCI+ KVW
Sbjct: 76 PEMGVILTNSELLPMASPTFEPGPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSKVW 135
Query: 509 SLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYHY 688
L +++ ++++DGNL + A +AT+A++ P + V+I+ + P+P +
Sbjct: 136 MLFLDLHIIDYDGNLFDAAVLATVAALLDTRIPAAEVEDGEVVINR-EKMQPLP--VNRK 192
Query: 689 PVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINTAGGL 808
+ TFA N+I+L DP+ EE + T+ G+ G +
Sbjct: 193 ALMCTFAKIGNEIVL-DPSLEEEDILTARISIGVTEEGSI 231
>UniRef50_A7AUY6 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Babesia bovis|Rep: 3'
exoribonuclease family, domain 1 containing protein -
Babesia bovis
Length = 196
Score = 124 bits (298), Expect = 4e-27
Identities = 60/150 (40%), Positives = 90/150 (60%)
Frame = +2
Query: 179 GHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINV 358
G RLDGR + RK+ + + G IVSLG+T + V+ E+ P P EGI+ +V
Sbjct: 32 GKRLDGRTSIQPRKIHVEQLANPGNVIVSLGDTIVFVAVSSEIVPPNVEHPTEGIVTFSV 91
Query: 359 ELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLN 538
EL+PM + +E + +D+ + +EK YKDS ID+ESLCIV + VW LR+NI +L
Sbjct: 92 ELSPMCSLNYEPGKASDVEQEISYAIEKIYKDSGIIDVESLCIVSRKHVWCLRVNIHILQ 151
Query: 539 HDGNLTECASIATLASIAHFXRPDFTRDGD 628
+DGNL + +IA ++ + +PD +GD
Sbjct: 152 NDGNLLDATNIAVFKALMSYRKPDTQLNGD 181
>UniRef50_Q4UFY0 Cluster: Exosome complex exonuclease, putative;
n=2; Theileria|Rep: Exosome complex exonuclease,
putative - Theileria annulata
Length = 322
Score = 115 bits (276), Expect = 2e-24
Identities = 67/200 (33%), Positives = 103/200 (51%), Gaps = 2/200 (1%)
Frame = +2
Query: 161 QKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEG 340
Q + G R+DGR+ + + + F G ++S G T I + V+ E+ +P RPNEG
Sbjct: 25 QDCLKNGLRIDGRSLDSYLYVSVDFDGPPGNSLISFGNTVIFTCVSQEIVEPNSERPNEG 84
Query: 341 IIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRI 520
+F NVE + + +E + TD L+ LE +K+S C+DLE+LCI ++V +LR+
Sbjct: 85 FLFFNVETS-FTSECYEPGKTTDQEHNLIYFLENMFKESSCLDLETLCITSGKQVLALRV 143
Query: 521 NIKVLNHDGNLTECASIATLASIAHFXRPDF-TRDGDRVIIHTLTEKDPIPTVLYHYPV- 694
+ VL DGNL S + LAS+ H+ +P D + L K P +YH P+
Sbjct: 144 YVHVLQDDGNLLSACSFSALASLLHYRKPLMELSDELNYSFYGLWHKG-TPLNIYHVPIL 202
Query: 695 CTTFALYSNDILLSDPNFLE 754
T + L + D D N E
Sbjct: 203 VTVWLLETRDHSFLDHNSSE 222
>UniRef50_A1RXQ5 Cluster: 3' exoribonuclease; n=1; Thermofilum
pendens Hrk 5|Rep: 3' exoribonuclease - Thermofilum
pendens (strain Hrk 5)
Length = 272
Score = 114 bits (274), Expect = 3e-24
Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 3/228 (1%)
Frame = +2
Query: 128 TCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVT 298
T + + +K I +++G RLDGR ++ R++ + G G V LG T++++ V
Sbjct: 6 TFVPSVKKEVILASLAKGERLDGRKADQYREIRLEKGIIGKADGSARVFLGSTQVIAGVK 65
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
+ P PNEG+ +N EL+P+A+P FE + + L R++++ ++ +K +DL
Sbjct: 66 LAIGTPFPDAPNEGVQIVNAELSPVASPFFEPGPPGEEDIELARVVDRGFRSAKVVDLAK 125
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
L I+ K W+L I+I L+HDGNL + A +A L ++ P + +++ + L EK
Sbjct: 126 LSIIPSAKCWTLYIDIYPLDHDGNLVDAAGLAALLALLDTKLPRTSVQENKIAV--LDEK 183
Query: 659 DPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINTAG 802
DP+P + V T A + L+ DP EE + GI G
Sbjct: 184 DPLP--INTLVVYVTVAKI-GEYLVVDPTLEEELTADAKITFGITERG 228
>UniRef50_Q64CA6 Cluster: TRNA nucleotidyltransferase; n=4;
environmental samples|Rep: TRNA nucleotidyltransferase -
uncultured archaeon GZfos24D9
Length = 260
Score = 113 bits (273), Expect = 4e-24
Identities = 72/233 (30%), Positives = 119/233 (51%), Gaps = 3/233 (1%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILS 289
M + + K+++ ++ +G R DGR F + R + + G V +G+T +L
Sbjct: 1 MGQEVIEDIRKDYVYDLIEKGKRADGRGFLDFRDIIVERDLIKKADGSTRVQIGDTVVLV 60
Query: 290 EVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCID 469
V E P PN+GI+ N EL P+A+P+FE+ + ++ L R++++ + S+ ID
Sbjct: 61 GVKVEPGAPFPDTPNKGILMTNAELVPLASPEFESGPPNEDSIELARVVDRGIRGSETID 120
Query: 470 LESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTL 649
LE LCI EKVW + I+I L++DGNL + A++ + S+ + P + R G L
Sbjct: 121 LEKLCIEEGEKVWMVFIDIHTLDNDGNLVDAAALGAITSLLNVTIP-YERYG-------L 172
Query: 650 TEKDPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINTAGGL 808
T +D + + PV T ++L+ DPN EES TS N G +
Sbjct: 173 TGEDTLQ--IRDTPVAVTVVEIGGNLLV-DPNVYEESAATSKLTVISNADGSI 222
>UniRef50_Q4D743 Cluster: Ribosomal RNA processing protein 45,
putative; n=2; Trypanosoma cruzi|Rep: Ribosomal RNA
processing protein 45, putative - Trypanosoma cruzi
Length = 334
Score = 113 bits (272), Expect = 5e-24
Identities = 62/196 (31%), Positives = 105/196 (53%), Gaps = 3/196 (1%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISF---GSEYGCCIVSLGETKILSEVTCE 304
L+ E F + G R D R + R++++ F + C V G T + + + CE
Sbjct: 16 LTQREVEFTKSAWIAGLRPDQRGAQQLREVNVDFPLLSRDVSC--VRCGGTIVTAAIACE 73
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 484
+ +P RP GII +V P + +++ +T L LE+ K +D E LC
Sbjct: 74 LVEPFPYRPKHGIIDFSVR-QPYT--ERDSSAKTAELKKLTAFLERLIKGGGVVDTEGLC 130
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDP 664
++ +VWS+ +++ VLN +GN+T+ A AT+A + H+ RP+ T GD VI+H E+DP
Sbjct: 131 VLPGRRVWSISVDVTVLNDEGNVTDVAVWATVAVLLHYRRPELTIRGDSVILHPTHERDP 190
Query: 665 IPTVLYHYPVCTTFAL 712
+P ++H P+ +FA+
Sbjct: 191 VPLSIHHTPLSFSFAI 206
>UniRef50_Q59X53 Cluster: Potential exosome component Rrp45p; n=1;
Candida albicans|Rep: Potential exosome component Rrp45p
- Candida albicans (Yeast)
Length = 337
Score = 113 bits (271), Expect = 7e-24
Identities = 73/223 (32%), Positives = 118/223 (52%), Gaps = 28/223 (12%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLD-------GRNFNETRKLDISFGS-EYGCCIVSLGETKILS 289
LS +KN++ + + RL R FN+ R +DI + YG +SLG+TK++
Sbjct: 5 LSLNQKNYLIQALKSNIRLSTSTNTGGSRKFNQFRPIDIKLSNTRYGSVELSLGKTKVMV 64
Query: 290 EVTCEVAQPKQIRPNEGIIFINVEL-NPMAAPQFEA----NRQTDLTVYLV-RLLEKCYK 451
+T + +P Q RP EGI+ IN E+ N + + N D + L+ R L++ +
Sbjct: 65 NITSRITEPYQDRPFEGIMTINCEIPNHIKLQSNDTTNNNNDNEDEFINLINRALDRAIR 124
Query: 452 DSKCIDLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRD--- 622
S +DLE+LCI+ EKVW L I+++VLN+DGNL + +A + ++ F +PD T +
Sbjct: 125 RSNAVDLENLCIIAGEKVWELIIDLQVLNYDGNLIDSGCLAIITALLDFKKPDVTINNNN 184
Query: 623 ----------GDRVIIHTLTEKDP-IPTVLYHYPVCTTFALYS 718
G +I+H K P I + H P+C TF+L++
Sbjct: 185 TSNSSSTSGGGGNIIVHDDEMKRPFIELSILHIPICLTFSLFN 227
>UniRef50_A3H8A6 Cluster: 3' exoribonuclease; n=1; Caldivirga
maquilingensis IC-167|Rep: 3' exoribonuclease -
Caldivirga maquilingensis IC-167
Length = 279
Score = 112 bits (270), Expect = 1e-23
Identities = 65/212 (30%), Positives = 117/212 (55%), Gaps = 4/212 (1%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCE 304
+ + ++ +++++S+G R D R R L I G + G +V+LG TK+++ + E
Sbjct: 9 IPSLRRDTLRRLISEGKRPDDRQLISMRDLTIRVGVIKTADGSALVNLGNTKVIAGIKFE 68
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 484
+ +P + PNEG + +N+E P+AAP FE + + + R++++ + S I L L
Sbjct: 69 LGKPFEDTPNEGNLIVNLETPPLAAPTFEPGPPDENAIEIARIIDRALRHSNYIPLRDLV 128
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDP 664
I+ + V+S+ ++I VLNHDGNL + + +A +++IA+ P DG+ V + T K P
Sbjct: 129 IIPGKSVYSMWVDIYVLNHDGNLIDSSMLAAVSAIANAQVPRAIIDGENVKLDKST-KIP 187
Query: 665 IPTVLYHYPVCTTFALYSND-ILLSDPNFLEE 757
+ + P+ T+ Y D L+ DP EE
Sbjct: 188 LNINPQNMPLTVTY--YKIDKYLIVDPTLEEE 217
>UniRef50_UPI000049A2AB Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 265
Score = 110 bits (265), Expect = 4e-23
Identities = 63/216 (29%), Positives = 112/216 (51%), Gaps = 1/216 (0%)
Frame = +2
Query: 158 IQKIVSQGHRLDGRNFNETRKLDISFGS-EYGCCIVSLGETKILSEVTCEVAQPKQIRPN 334
++ ++ +G R+D R +E R ++SF E G +G +K L E E P + RP+
Sbjct: 4 VEGLLQKGIRIDARRLDEFR--EVSFVCREPGSVETHIGNSKALGECVVEPVCPGRSRPD 61
Query: 335 EGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSL 514
+GI I V MA P F +R + + +++E+ ++ ID++ L I+ + VW +
Sbjct: 62 QGIFNIRVNFLEMANPNFYDSRGPRDLIEIGKVVERGLLSTRAIDVDGLVIIRGKLVWKI 121
Query: 515 RINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYHYPV 694
+ + ++N GNL + SI ++++ R + G V I T E+ P+P ++H P+
Sbjct: 122 TVCVHIINDCGNLMDLVSITAISALLTAVRREVQICGTDVKILTPEERKPVPLAIHHIPI 181
Query: 695 CTTFALYSNDILLSDPNFLEESVCTSNTEEGINTAG 802
+F + + + L DP+ EESVC S+ IN G
Sbjct: 182 TVSFGITESGVPLLDPSEREESVCKSHLTIAINKEG 217
>UniRef50_Q8U0M0 Cluster: Probable exosome complex exonuclease 2;
n=8; Euryarchaeota|Rep: Probable exosome complex
exonuclease 2 - Pyrococcus furiosus
Length = 277
Score = 110 bits (265), Expect = 4e-23
Identities = 60/216 (27%), Positives = 114/216 (52%), Gaps = 3/216 (1%)
Frame = +2
Query: 125 DTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEV 295
D ++ +++I ++ + R+D R F + R +++ G G +V LG T++L +
Sbjct: 4 DEIVAGIMRDYILNLLKEKKRIDDRGFEDYRPIEVEVGVIEKAEGSALVKLGNTQVLVGI 63
Query: 296 TCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLE 475
+ +P PN G++ NVEL P+A+P FE + + L R++++ ++S+ ++LE
Sbjct: 64 KATLGEPFPDTPNMGVMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESRALNLE 123
Query: 476 SLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTE 655
+ I + V + I++ VL+HDGNL + I +A++ + P + + + L E
Sbjct: 124 KMVIAPGKIVRVVFIDVHVLDHDGNLMDAIGIGAIAALLNARVPKVLYNEETGEVEILEE 183
Query: 656 KDPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESV 763
K+P+P + P+ TFA N L+ DP EE +
Sbjct: 184 KEPLP--VEKIPISVTFAKIGN-YLVVDPTLEEEQI 216
>UniRef50_Q8TGX5 Cluster: Probable exosome complex exonuclease 2;
n=9; Archaea|Rep: Probable exosome complex exonuclease 2
- Methanosarcina acetivorans
Length = 266
Score = 110 bits (265), Expect = 4e-23
Identities = 66/220 (30%), Positives = 117/220 (53%), Gaps = 3/220 (1%)
Frame = +2
Query: 116 KMRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKIL 286
K ++ +K++I ++ +G R DGR F + R L + G V+LG T++L
Sbjct: 2 KKMSEIIATLKKDYIYNLMIKGKRQDGRGFKDFRDLKLETNVIVKAEGSAKVTLGNTQVL 61
Query: 287 SEVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCI 466
V + P +EG+I N+ELNP+A+P+FE + + + R++++ ++S I
Sbjct: 62 VGVKLQTGTPFPDSQDEGVIITNLELNPIASPEFEPGPPREEAIEMARVVDRGIRESGAI 121
Query: 467 DLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHT 646
D++ LCI V E VW + I++ VLN DGN+ + + +A +A++ P+ + G
Sbjct: 122 DIKKLCITVGESVWIVFIDVHVLNDDGNIIDASCLAAIAALMTTMVPN-EQQG------- 173
Query: 647 LTEKDPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVC 766
L E +P + PV T A + +++ DP+ EE+VC
Sbjct: 174 LGE--DVPLAMKEMPVGITIAKIGSKLMV-DPSLDEEAVC 210
>UniRef50_Q2NEX4 Cluster: Putative exosome complex, exonuclease 2
subunit; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
Putative exosome complex, exonuclease 2 subunit -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 265
Score = 107 bits (256), Expect = 5e-22
Identities = 62/228 (27%), Positives = 112/228 (49%), Gaps = 3/228 (1%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCE 304
+S K + +++QG R+D R F+E R + I G G +VS+G T ++ V +
Sbjct: 5 ISEVSKEKVFDLLNQGKRIDDRKFSEYRNISIKTNYIGKADGSAMVSIGCTTVIVGVKAQ 64
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 484
+ P PN GII N EL +A+ FE V + R++++ ++S +DL+ LC
Sbjct: 65 MTTPFNNAPNSGIIITNTELLAIASRNFEYGPPNKFAVEISRVVDRAIRESPVVDLDKLC 124
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDP 664
++ K W L I++ +++ DGN+ + A + + ++ P T ++I P
Sbjct: 125 VIEGSKSWKLHIDMYIVDFDGNIMDAACLGAICALLTTKIPTATSVNGEIVIDE-ENLTP 183
Query: 665 IPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINTAGGL 808
+P + +CT + N+ L+ DP+ +EE + S+ G G L
Sbjct: 184 LP-IKNRSILCTVVKI--NNQLIVDPSKIEEILMDSSVSFGFREDGSL 228
>UniRef50_Q5CYG9 Cluster: RRP45-like archaeo-eukaryotic exosomal
rnase, PH domain; n=2; Cryptosporidium|Rep: RRP45-like
archaeo-eukaryotic exosomal rnase, PH domain -
Cryptosporidium parvum Iowa II
Length = 432
Score = 104 bits (249), Expect = 3e-21
Identities = 74/233 (31%), Positives = 115/233 (49%), Gaps = 20/233 (8%)
Frame = +2
Query: 155 FIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPN 334
FI + G RLDGR NE R + I+ YG V++G T +LS V E+ P Q R +
Sbjct: 28 FIVSVREYGLRLDGRTMNEYRNVKINLNKNYGEVEVNIGRTHVLSVVKSELVAPSQERSS 87
Query: 335 EGIIFINVELNPMAA-PQFEANR--QTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
EG I V++ P++ P A R +T L + +E+ K++ ID E LCI+ V
Sbjct: 88 EGFISFTVDIGPLSINPTSHAFRHNRTTLGTEIANYIERILKETGAIDTEILCILSGVCV 147
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRD-----------GDR---VIIH 643
WS++ I VL DGNL + +ATL+ + H+ + D G+R + +
Sbjct: 148 WSVKCEIHVLFDDGNLFDACLMATLSGLKHYRYNEIDVDSFLKKSKCEGFGERDYQRLEN 207
Query: 644 TLTEKDPIPTVLYHYPVCTTFALYSNDILLS---DPNFLEESVCTSNTEEGIN 793
T+ + + IP ++H+P+ + + LS DPN EES+ + IN
Sbjct: 208 TIRKLEMIPFNVHHFPLSISIGYINGKEGLSYIVDPNSDEESISDTIIHISIN 260
>UniRef50_Q4QBI9 Cluster: Exosome complex exonuclease RRP45 homolog,
putative; n=3; Leishmania|Rep: Exosome complex
exonuclease RRP45 homolog, putative - Leishmania major
Length = 363
Score = 103 bits (246), Expect = 8e-21
Identities = 55/183 (30%), Positives = 97/183 (53%), Gaps = 2/183 (1%)
Frame = +2
Query: 179 GHRLDGRNFNETRKLDISFGSEYGCCI-VSLGETKILSEVTCEVAQPKQIRPNEGIIFIN 355
G R D R+ N+ R ++I F + V G T + ++C++ +P RP G ++
Sbjct: 29 GLRPDQRDANQLRVVEIDFPLLSRDVVQVKCGNTVATATISCDLVEPSPYRPKHGFFEVH 88
Query: 356 V-ELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKV 532
+L P ++ +++YL RLL ++ ESLC++ +VWS+ + +
Sbjct: 89 ARQLLNERDPLDQSKEIKRISMYLTRLLS-----GSVLETESLCVIPGRRVWSIDAEVII 143
Query: 533 LNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFAL 712
+N+DGN + A A + ++ H RP+ T G+ VI+H E+DP+P L+H P+ TFA+
Sbjct: 144 VNNDGNAQDVAQWAVMTALQHVRRPELTIRGEDVIVHPPHERDPVPLPLHHIPLSFTFAV 203
Query: 713 YSN 721
+N
Sbjct: 204 CAN 206
>UniRef50_UPI000051A59D Cluster: PREDICTED: similar to Exosome
complex exonuclease RRP43 (Ribosomal RNA-processing
protein 43) (Exosome component 8) (p9) (Opa-interacting
protein 2); n=3; Endopterygota|Rep: PREDICTED: similar
to Exosome complex exonuclease RRP43 (Ribosomal
RNA-processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) - Apis mellifera
Length = 281
Score = 101 bits (241), Expect = 3e-20
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 5/209 (2%)
Frame = +2
Query: 155 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 325
++Q ++Q R DGR F R + ++ S I +G T I+ + E+A PK
Sbjct: 13 YLQDHLAQDVRPDGRQFLSFRPISVNISSITHADSSAIFKIGNTTIVCGIKSELAVPKAE 72
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
P G I N+EL P+ +P+F +D + +L+E ++S IDL+ LC+ + V
Sbjct: 73 SPECGYIVPNIELPPLCSPKFRPGPPSDQAQVITKLVENILRNSAAIDLKELCVYKGKLV 132
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPD--FTRDGDRVIIHTLTEKDPIPTVL 679
W L ++ +N+DG++ + A A++ P+ + + V I++ T++ P +
Sbjct: 133 WVLYCDLVCINYDGSIIDACIGALTATLNTLTLPEIFYNVETGHVSINS-TKRIRFP--I 189
Query: 680 YHYPVCTTFALYSNDILLSDPNFLEESVC 766
PV TFA++ N +L++DP EES+C
Sbjct: 190 KALPVSITFAIFDNQLLIADPTDDEESLC 218
>UniRef50_Q8ZVN0 Cluster: Probable exosome complex exonuclease 2;
n=4; Pyrobaculum|Rep: Probable exosome complex
exonuclease 2 - Pyrobaculum aerophilum
Length = 274
Score = 99.1 bits (236), Expect = 1e-19
Identities = 58/211 (27%), Positives = 111/211 (52%), Gaps = 3/211 (1%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCE 304
+S + I+++++ +R+DGR +TR ++I+ G + G V LG+T +++ V
Sbjct: 12 ISYLRREQIRRLLATKYRVDGRGPEQTRNVEINVGVVKTADGSAEVKLGKTHVVAGVKVG 71
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 484
+ QP P+EG++ +N E+ P A+P E + + L R++++ + +D + L
Sbjct: 72 LGQPFPDAPDEGVLVVNAEVLPHASPYTEVGPPDEFAIELARVVDRGIRHCGYVDFKKLA 131
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDP 664
V K + L I++ V+N DGNL + A++A++A++ + P +D V+ K P
Sbjct: 132 -VEGGKAYVLWIDLYVINDDGNLIDVANLASVAALKNTQLPVVVKDEAGVVKLDRNNKAP 190
Query: 665 IPTVLYHYPVCTTFALYSNDILLSDPNFLEE 757
+P + P+ + N +L DP F EE
Sbjct: 191 LPVDISKAPIAVSVGKIGN-VLFLDPTFEEE 220
>UniRef50_Q6L224 Cluster: Ribonuclease PH; n=2;
Thermoplasmatales|Rep: Ribonuclease PH - Picrophilus
torridus
Length = 260
Score = 98.7 bits (235), Expect = 2e-19
Identities = 62/213 (29%), Positives = 112/213 (52%), Gaps = 3/213 (1%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCE 304
+S +++ I + +G RLDGR N+ R + I G +V LG TK+++ V E
Sbjct: 9 ISGLKRDMILNSIKRGKRLDGRGLNDFRDIKIFENYIPKASGSAMVELGRTKVVAGVKIE 68
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 484
+P P++G++ +N+E+ PMA P FEA + + R++++ ++SK ID+ L
Sbjct: 69 EGEPFPDTPDQGVMALNIEMLPMAFPTFEAGPPGEEAIEYSRVVDRGIRESKMIDVTRLV 128
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDP 664
I KVW + I+I ++N+ GN+ + ++IA +A++ + P G+ K P
Sbjct: 129 IEPGTKVWMVFIDIDIINYAGNIIDASTIAAVAALRNAIVPASRIGGEDF-------KLP 181
Query: 665 IPTVLYHYPVCTTFALYSNDILLSDPNFLEESV 763
+ PV T A +++++ DP+ EE V
Sbjct: 182 VNA----NPVSVTMAKIGDELVI-DPDLEEEQV 209
>UniRef50_Q9UXC0 Cluster: Probable exosome complex exonuclease 2;
n=5; Sulfolobaceae|Rep: Probable exosome complex
exonuclease 2 - Sulfolobus solfataricus
Length = 275
Score = 98.7 bits (235), Expect = 2e-19
Identities = 56/209 (26%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
Frame = +2
Query: 146 EKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQP 316
+K I + +G R DGR + R L I+ G +V LG T +L+ E+ +P
Sbjct: 15 KKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKP 74
Query: 317 KQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVE 496
+ PN+G + +NVEL P+A FE + + L R++++ +DSK +DL L I
Sbjct: 75 YEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPG 134
Query: 497 EKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTV 676
+ VW++ +++ VL++ GN+ + ++A++A++ + + + + ++ + + + +
Sbjct: 135 KSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGI---SVNKNEVVGKL 191
Query: 677 LYHYPVCTTFALYSNDILLSDPNFLEESV 763
+YPV T + L+ DP+ EES+
Sbjct: 192 PLNYPVVTISVAKVDKYLVVDPDLDEESI 220
>UniRef50_A0D7R2 Cluster: Chromosome undetermined scaffold_40, whole
genome shotgun sequence; n=4; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_40, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 984
Score = 98.3 bits (234), Expect = 2e-19
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 4/230 (1%)
Frame = +2
Query: 80 N*IFTKKYEPSNKMRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEY-GCC 256
N I KKY + L N E F+ + ++ G R+DGR+ + R + FG + G
Sbjct: 752 NIIKHKKYNYKIYLFIKPLKNFE--FVLEQLTLGKRIDGRDPLQLRMIQSHFGPQITGAV 809
Query: 257 IVSLGETKILSEVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLL 436
+SLGET + S ++ P IRP+EG + +++L + + N L + + + +
Sbjct: 810 ELSLGETSV-SRMS-----PNPIRPSEGFLKFHLDLQVLRDTGYMHN-PIKLDMEIEKYI 862
Query: 437 EKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFT 616
EK K SK +D ESLCI+ + VWS+ +N+ ++N+DGNL + + + S HF RP +
Sbjct: 863 EKVIKGSKALDTESLCILSGKNVWSIDVNVALINNDGNLLDAMYLCCIFSQQHFRRPQVS 922
Query: 617 RDGDRVIIHTLTEKDPIPTVLYHYPVCTTFA---LYSNDILLSDPNFLEE 757
V + EK +P ++H P+ T A L ILL D EE
Sbjct: 923 VSLQGVKVE--VEKRLVPLSIHHIPLSLTQAILELNEQTILLQDSCLEEE 970
>UniRef50_Q7Q0D9 Cluster: ENSANGP00000011759; n=2; Culicidae|Rep:
ENSANGP00000011759 - Anopheles gambiae str. PEST
Length = 274
Score = 97.9 bits (233), Expect = 3e-19
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Frame = +2
Query: 185 RLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFIN 355
R DGR E R L ISF S G IV +G T ++ + E+A P + P G + N
Sbjct: 24 RPDGRELEELRPLAISFDVIKSADGSAIVKVGNTTVVCGIKAELATPNALAPRHGFLVPN 83
Query: 356 VELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVL 535
V+L+P+++P + D + + +++CIDL+ LCI + VW L ++ L
Sbjct: 84 VDLSPVSSPSYRPGPPCDEAQVYSQSVADAISNARCIDLQQLCISPGKLVWCLYCDLVCL 143
Query: 536 NHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY 715
+HDG + + A IA +A+ P + D T + +P + PV T+F +
Sbjct: 144 DHDGCVLDAAIIALVAAFHTVKLPTIQYNSDTEETEADTSR-LLPLTVDCVPVTTSFVMV 202
Query: 716 SNDILLSDPNFLEESVCTSNTEEGINTAGGLLVFGNES 829
+ L++DP EE + ++T + + G + F N+S
Sbjct: 203 AGR-LIADPTTEEEKL--ASTTLTVTVSDGKMSFFNQS 237
>UniRef50_Q96B26 Cluster: Exosome complex exonuclease RRP43; n=37;
Eumetazoa|Rep: Exosome complex exonuclease RRP43 - Homo
sapiens (Human)
Length = 276
Score = 97.1 bits (231), Expect = 5e-19
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Frame = +2
Query: 155 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 325
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 13 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 72
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 73 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 132
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYH 685
W L ++ L++DGN+ + + A LA++ + P+ T + + + +K + H
Sbjct: 133 WVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNIRTH 192
Query: 686 YPVCTTFALYSNDILLSDPNFLEESVCT 769
PV T+FA++ + +L+ DP EE + T
Sbjct: 193 -PVATSFAVFDDTLLIVDPTGEEEHLAT 219
>UniRef50_Q583T6 Cluster: Ribosomal RNA processing protein 45; n=2;
Trypanosoma brucei|Rep: Ribosomal RNA processing protein
45 - Trypanosoma brucei
Length = 363
Score = 94.3 bits (224), Expect = 4e-18
Identities = 53/196 (27%), Positives = 96/196 (48%), Gaps = 3/196 (1%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGS-EYGCCIVSLGETKILSEVTCEVA 310
L+ E F + G R D R + R++ + F +V G + + + + +
Sbjct: 15 LTQREVEFTKSAWLAGLRPDQRTAQQMREVSVEFPLLSRDVVVVRCGGSVVTAAIATALV 74
Query: 311 QPKQIRPNEGIIFINVEL--NPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 484
+P RP G++ +V +P + + Q +L +L RL+ + ID LC
Sbjct: 75 EPTPQRPKHGLLHFSVRRLHTERDSPAADGSTQKNLVAFLERLV----RTGGVIDTAGLC 130
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDP 664
++ +KVWSL +++ ++N +GN + A A +A + H RP+ T G VI+H E++P
Sbjct: 131 VLPGQKVWSLTVDVTIMNDEGNCNDAAVWAVIALLMHHRRPELTVRGSSVIVHPPHEREP 190
Query: 665 IPTVLYHYPVCTTFAL 712
+P + H P+ TFA+
Sbjct: 191 VPLSVQHTPLPFTFAI 206
>UniRef50_Q9YC05 Cluster: Probable exosome complex exonuclease 2;
n=4; Desulfurococcales|Rep: Probable exosome complex
exonuclease 2 - Aeropyrum pernix
Length = 276
Score = 93.5 bits (222), Expect = 6e-18
Identities = 55/202 (27%), Positives = 104/202 (51%), Gaps = 3/202 (1%)
Frame = +2
Query: 167 IVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIRPNE 337
++ +G R R+ R + I G G +V LG+T++++ V V P + PN+
Sbjct: 22 LLRKGWRPGDRDLKTPRNVKIETGIIEKAEGSALVKLGKTQVIAGVKAGVGAPFKDTPNQ 81
Query: 338 GIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLR 517
G++ ++ E P+A+P FE + + L R++++ ++ +DLESL I EKVW L
Sbjct: 82 GVLTVHAEFVPLASPVFEPGPPDENAIELARVVDRSLREVGAVDLESLVIRPGEKVWVLW 141
Query: 518 INIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVC 697
+++ +++HDGNL + + +AT+A + P + II ++++ + V
Sbjct: 142 VDLYIIDHDGNLFDASMLATMAVLLTARLPRYEESETGEII--ISKEGEGEELKVKTRVV 199
Query: 698 TTFALYSNDILLSDPNFLEESV 763
T + ++ DPN EE+V
Sbjct: 200 TVTTAKIDRYIVVDPNIEEEAV 221
>UniRef50_Q10205 Cluster: Putative exosome complex exonuclease
RRP43; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP43 - Schizosaccharomyces
pombe (Fission yeast)
Length = 270
Score = 91.5 bits (217), Expect = 3e-17
Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 6/213 (2%)
Frame = +2
Query: 149 KNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEVAQPK 319
+ ++ +++Q R DGR+ +E R++ I+ + G I+ GE + + E+A+P
Sbjct: 23 EQYLSHLLNQDVRSDGRSVSEFREIVINDNCISTANGSAIIRAGENVFVCGIKAEIAEPF 82
Query: 320 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEE 499
+ PNEG I N+EL+P+ + +F+ +DL + + L + + S I+L+SLCI ++
Sbjct: 83 ENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVVSQELHQTLQQSNLINLQSLCIFEKK 142
Query: 500 KVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGD--RVI-IHTLTEKDPIP 670
W L +I LN+DG+ + A A A++ P D D RVI TLT +
Sbjct: 143 AAWVLYADIICLNYDGSAFDYAWAALFAALKTVKLPTAVWDEDLERVICASTLTRPVQLS 202
Query: 671 TVLYHYPVCTTFALYSNDILLSDPNFLEESVCT 769
T + + +++++ +D LL+DP EE + T
Sbjct: 203 TEVRSF----SWSVF-DDKLLADPTDEEEDLST 230
>UniRef50_Q15024 Cluster: Exosome complex exonuclease RRP42; n=36;
Eumetazoa|Rep: Exosome complex exonuclease RRP42 - Homo
sapiens (Human)
Length = 291
Score = 87.4 bits (207), Expect = 4e-16
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILS 289
M LS EK +I V + R+DGR + R +++ + G V LG T IL
Sbjct: 1 MASVTLSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV 60
Query: 290 EVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCID 469
V E+ PK +PNEG + V+ + A P+FE DL + L + + + +D
Sbjct: 61 GVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD 120
Query: 470 LESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASI 589
L++LCI E W L +++ +L GNL + SIA A++
Sbjct: 121 LKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAAL 160
>UniRef50_Q29QQ9 Cluster: IP10364p; n=8; Endopterygota|Rep: IP10364p
- Drosophila melanogaster (Fruit fly)
Length = 296
Score = 82.6 bits (195), Expect = 1e-14
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 7/225 (3%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILS 289
M LS EK +I V R DGR+ + R +D+ G + G + L T IL
Sbjct: 1 MAYVALSEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILV 60
Query: 290 EVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCID 469
V E+ P + P G + V+ + A P+FE +DL L+ L+ Y+ +
Sbjct: 61 GVKTEIDVPNPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFN 120
Query: 470 LESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDG-DRVIIHT 646
+LC++ ++ W L I+I +L GNL + S+A A++ + P T D I
Sbjct: 121 YRTLCLIPGQQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPRVTATMLDAGITDL 180
Query: 647 LTEKDPIPTV---LYHYPVCTTFALYSNDILLSDPNFLEESVCTS 772
+ +P + P+ T D +L DP+ EE VC++
Sbjct: 181 IISDNPYDCTRIGIETVPLLVTVCKI-GDYVLVDPS-AEEEVCST 223
>UniRef50_Q2QT85 Cluster: 3' exoribonuclease family, domain 1
containing protein, expressed; n=2; Oryza sativa
(japonica cultivar-group)|Rep: 3' exoribonuclease
family, domain 1 containing protein, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 284
Score = 80.6 bits (190), Expect = 5e-14
Identities = 50/161 (31%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCE 304
LS EK+FI+ ++Q R DGR + R + + G G V LG T++++ V E
Sbjct: 4 LSEGEKHFIRGGIAQDLRTDGRRRLQFRAISVETGVIPQANGSARVRLGATEVIATVKAE 63
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSK-----CID 469
+ +P + P++G + I V+ +P AAP FE + + L L++C K ID
Sbjct: 64 LGKPSILHPDKGKVSIFVDCSPTAAPMFEGRGSEEFSAELCVALQRCLLGGKSGAGAAID 123
Query: 470 LESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIA 592
L SL +V + W L I+ V++ DGNL + + A +++
Sbjct: 124 LSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALS 164
>UniRef50_A0RXU0 Cluster: RNase PH-related exoribonuclease; n=1;
Cenarchaeum symbiosum|Rep: RNase PH-related
exoribonuclease - Cenarchaeum symbiosum
Length = 270
Score = 79.8 bits (188), Expect = 8e-14
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 3/230 (1%)
Frame = +2
Query: 128 TCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVT 298
T + ++ I ++ +G R+DGR +E RKL I + G V LG T +++ V
Sbjct: 5 TVIDELKRAKIAALLERGERIDGRRLDEPRKLTIETNAIPKAEGSARVHLGRTDVVTGVK 64
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
+ +P + GI E+ P+A P E + + L R++++ ++S +DL
Sbjct: 65 VQPDRPFPDVGDRGIFICTAEILPLAHPDVETGPPSPAVIELARVVDRGIRESGMVDLSK 124
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
L ++ ++ V + + V++ DGNL + S A A+I P + + + + +
Sbjct: 125 LVLLKDKSVIGIFADSSVIDVDGNLFDACSYAATAAILTAKLPKWEIQDEAPV--RIEGE 182
Query: 659 DPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINTAGGL 808
P+P PV T A + IL+ DPN E +V + N+ G +
Sbjct: 183 TPVPVTT--IPVSVTMAKINGHILV-DPNQDEWAVMDARITITTNSDGNI 229
>UniRef50_Q9ZUI4 Cluster: T2K10.14 protein; n=10; Magnoliophyta|Rep:
T2K10.14 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 302
Score = 78.2 bits (184), Expect = 3e-13
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 18/221 (8%)
Frame = +2
Query: 155 FIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQI 325
F ++ +S+ R DGR + R ++ G + G + +G T +L+ + EV P
Sbjct: 27 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 86
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
P+EG I I + P+ +P R + + + L S IDL+ LC+V +
Sbjct: 87 SPDEGCIAIEFHMPPICSPTVRPGRPAEAAPVISKRLSDTILSSGMIDLKELCLVSGKAA 146
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFT-RDGDRVIIHT---------LTE 655
W ++I L+ DG L + A +A +A+ ++ P D R++ T +TE
Sbjct: 147 WMGYLDIYCLDADGALFDAALLAAVAAFSNLQIPIVALNDNGRIVAVTGEKDQDNALITE 206
Query: 656 KDPI-----PTVLYHYPVCTTFALYSNDILLSDPNFLEESV 763
K+ + L + P T L+ N +L+DP EES+
Sbjct: 207 KEAVNKEKRKLTLKNIPFSLTCILHKN-YILADPTTEEESI 246
>UniRef50_Q5DA97 Cluster: SJCHGC04772 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04772 protein - Schistosoma
japonicum (Blood fluke)
Length = 277
Score = 77.4 bits (182), Expect = 4e-13
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILS 289
M LS+ E+ ++ + + G R+DGR +E R L+I G + +GET I+
Sbjct: 1 MDTVLLSDLERFYLIQGIEVGCRMDGRGPSEYRPLEIETNILSHATGSASIRIGETFIVC 60
Query: 290 EVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCID 469
V EV +P R NEG I INVE P A + ++L L L+ Y+ S+ I+
Sbjct: 61 CVKMEVGKPSLTRLNEGRIEINVECYPTATYRCNEKGASELAERLKTTLQSTYQ-SEFIN 119
Query: 470 LESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASI 589
L SLCI + W + I++ +L GNL + +S+ A++
Sbjct: 120 LNSLCIQRGRQCWVIYIDLLILEGAGNLLDASSLVIKAAL 159
>UniRef50_Q5KMZ6 Cluster: Opa-interacting protein OIP2, putative;
n=1; Filobasidiella neoformans|Rep: Opa-interacting
protein OIP2, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 297
Score = 76.6 bits (180), Expect = 8e-13
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 2/182 (1%)
Frame = +2
Query: 230 SFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTD 409
S + +G +V +G+T ++ V EV +P P EG + N++L +++P+F+ D
Sbjct: 82 SISTAHGSALVRMGDTTMVCGVKAEVGEPDAEAPGEGFVVPNIDLPALSSPKFKPGPPGD 141
Query: 410 LTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASI 589
L + SK I L SL I + W L I++ +N+DGN + A +A +A++
Sbjct: 142 EAQTYSNWLYELLVSSKTIPLSSLLIAPGKAAWVLYIDVVCINYDGNAFDAAVLAVMAAL 201
Query: 590 AHFXRPDFTRDGD-RVIIHTLTEKDPIPTVLYHYPVCTTFALYSN-DILLSDPNFLEESV 763
+ P D D + I + TE+ P+ L P+ +F ++ S PN + +
Sbjct: 202 RNTRLPKAVYDDDTQRTICSRTERYPLS--LGRMPLACSFGIFERCHPPPSRPNVIRNPI 259
Query: 764 CT 769
T
Sbjct: 260 AT 261
>UniRef50_A2DPV1 Cluster: Nucleolar autoantigen-like protein,
putative; n=1; Trichomonas vaginalis G3|Rep: Nucleolar
autoantigen-like protein, putative - Trichomonas
vaginalis G3
Length = 315
Score = 75.4 bits (177), Expect = 2e-12
Identities = 66/211 (31%), Positives = 94/211 (44%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQ 313
+S E ++++S G R DGR+ NE R+L + F G IV LG T + V
Sbjct: 9 VSKNEIRSTREMLSNGLRPDGRDPNEPRRLTVDFSD--GAAIVKLGSTIVSCRVIKNQVL 66
Query: 314 PKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVV 493
+ PN+G I + F A T+ VR + +K + +DLESL I +
Sbjct: 67 ADENHPNQGFFSIGLSSTHKIDSYFRAE-----TLNAVRDM---FKMNNALDLESLVIQI 118
Query: 494 EEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPT 673
+ VW L+ I +L +DG L E ++A + P TR GDR +LT
Sbjct: 119 GKLVWELKCEIVILENDGGLFEAMTLAVGCGLLATKLPS-TR-GDR----SLT------- 165
Query: 674 VLYHYPVCTTFALYSNDILLSDPNFLEESVC 766
L+H P+ TFAL DP LE C
Sbjct: 166 -LHHLPIPITFALIDQRTRFVDPTVLEALAC 195
>UniRef50_Q4P345 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 332
Score = 72.5 bits (170), Expect = 1e-11
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 31/239 (12%)
Frame = +2
Query: 152 NFIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQ 322
+++ + + R DGR R I+ GS G V +G T ++ + EVA P+
Sbjct: 20 SYLSRFLDASIREDGRPLAAFRDATITLGSISTADGSSFVRIGNTSCIAAIKAEVATPQL 79
Query: 323 IRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEK 502
RP EG + NVEL + + +F+ D L L S +D + LCI
Sbjct: 80 SRPREGYLIPNVELPAVCSSKFKPGAPGDEAQVLTSRLLALLNSSNLLDRQLLCIQDAIA 139
Query: 503 VWSLRINIKVLNHDGNLTECASIATLASIA------HFXRPDFTRDG---DRVIIHTLTE 655
VW L ++I + DGN + A +A +++++ H +R D +++ +
Sbjct: 140 VWCLYLDISFICFDGNAMDAAVLAAVSALSDSKFAIHTYTLSHSRPSSLTDALVLTPTAK 199
Query: 656 KDPIPTVLY-------------------HYPVCTTFALYSNDILLSDPNFLEESVCTSN 775
+P Y H P ++F+++ N LLSDP E ++ +S+
Sbjct: 200 TAKLPAATYDPDTEQVRCSSSRTALHLEHVPFASSFSIFENQYLLSDPTAFESALSSSH 258
>UniRef50_UPI0000E49695 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 336
Score = 71.7 bits (168), Expect = 2e-11
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Frame = +2
Query: 185 RLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFIN 355
R DGR R ++ G + G + L T++L V E+ P + P+ G I
Sbjct: 163 RSDGRTCLSYRNFELECGVVSNTSGSARLKLSNTQVLVGVKAEMGPPNPLNPSRGGIEFF 222
Query: 356 VELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVL 535
V+ + A+P+F +L + +L YK+ K +D +SLC++ + VW+L +I VL
Sbjct: 223 VDFSANASPKFAGRGGDELAAEISNMLGLVYKNKKMLDYKSLCVIAGQCVWTLYADIVVL 282
Query: 536 NHDGNLTECASIATLASI 589
GNL + ++A A++
Sbjct: 283 ECGGNLLDAIALAVKAAL 300
>UniRef50_Q8SVE0 Cluster: Putative uncharacterized protein
ECU06_0390; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU06_0390 - Encephalitozoon
cuniculi
Length = 218
Score = 69.7 bits (163), Expect = 9e-11
Identities = 44/136 (32%), Positives = 73/136 (53%)
Frame = +2
Query: 158 IQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNE 337
++ +V G R D R E R+L++ S C+V++G +++L+ ++P RP+E
Sbjct: 3 VKNLVKAGERFDNRKIEEARRLEVERISN--SCLVTMGASQLLTVFQKSTSRPYIDRPHE 60
Query: 338 GIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLR 517
GI+ +V A ++E LV L K Y K IDLESLCI + E+V +
Sbjct: 61 GIVSFSVSTG---AKKYER---------LVNFLHKVYIKQKSIDLESLCIRLNEEVVLIH 108
Query: 518 INIKVLNHDGNLTECA 565
I+++VL+ DG++ A
Sbjct: 109 IDLRVLSGDGSIYSLA 124
>UniRef50_A2F1P7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 329
Score = 68.1 bits (159), Expect = 3e-10
Identities = 56/212 (26%), Positives = 95/212 (44%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQ 313
LSN E + G R DGR F+E+RKL + + G V LG T++ + T +A
Sbjct: 3 LSNNEFEAYTLALKAGIRGDGRRFDESRKLIVQEITTPGVANVQLGNTRVTAITTARLAM 62
Query: 314 PKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVV 493
P P +G I + N P ++ + T + R++ +K + ++ ESLC+ V
Sbjct: 63 PALSTPKKGTHNIYI-FND--TPVQKSTAEAFQTYF--RMI---WKSCRILEDESLCVKV 114
Query: 494 EEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPT 673
EKVW L + + + DG + E A LAS+ P F + V+ L + +
Sbjct: 115 GEKVWMLTTRLIIHDDDGGILEAGFAAILASLGSLRFPSFDAN-TGVLFSPLHHR--VHK 171
Query: 674 VLYHYPVCTTFALYSNDILLSDPNFLEESVCT 769
+ + + D +++DP +E + T
Sbjct: 172 IAFGVRAILVTVSFFEDKIVADPTSVETLIST 203
>UniRef50_Q54CU6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 293
Score = 65.7 bits (153), Expect = 1e-09
Identities = 50/215 (23%), Positives = 102/215 (47%), Gaps = 12/215 (5%)
Frame = +2
Query: 155 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 325
F +K + + R DGR+ ++ RK IS GS G V +G T ++ V EV + I
Sbjct: 12 FYRKYLVRSVRPDGRSLDDIRKTTISTGSITTADGSSFVKIGSTSVVCGVRAEVGEKPSI 71
Query: 326 RPNEGI---------IFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
++ IFIN+EL P+ + F +++ +D+ + L L + + +
Sbjct: 72 DKSKFSTLNVHENKNIFINIELGPICSNTFSSSKPSDIAMSLCSRLNSLINRLEIPETDY 131
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
+ +W L +++ L++DGN+ + A ++ ++++ + P + + L E
Sbjct: 132 YFDEEGKALWYLYVDVYCLDYDGNIYDAAVLSIISALKNVKLPKGIIENNDEFYKDL-ES 190
Query: 659 DPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESV 763
+ HY + +F++ +D +L+DP+ EE +
Sbjct: 191 PQRKLNIQHYLIPLSFSVI-DDYILADPSLDEEKL 224
>UniRef50_UPI0000498B14 Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 265
Score = 65.3 bits (152), Expect = 2e-09
Identities = 54/230 (23%), Positives = 103/230 (44%), Gaps = 7/230 (3%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCE 304
LS E NFI++ + R DGR + R++ G G + LG+T+++ V CE
Sbjct: 4 LSQPEINFIKEGIKTNIRTDGRANIQFREIKCEKGVIDQANGSVRLCLGKTEVVVGVKCE 63
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 484
+ +P + P G NV + + +R ++ ++ LE KD L+ LC
Sbjct: 64 LGEPSVLTPESGRY--NVLVKQVGTM---TSRDVEIEKMILVSLENAGKDM----LQELC 114
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDF-TRDGDRVIIHTLTEKD 661
++ + W + +++ V+ DGN+ +C +A A++ + P GD + +KD
Sbjct: 115 VLKGKLCWIIYVDVVVVEDDGNVMDCTGLAVRAALLNTLIPIVNVISGDSDTVQVDIDKD 174
Query: 662 PIPTVLY---HYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINTAG 802
+ + P+C + + + ++DP+ +EE S I + G
Sbjct: 175 NVQFKKFKPESVPLCVSLIQFEKE-FIADPSKVEEKCNGSEITTAITSNG 223
>UniRef50_Q5BWV4 Cluster: SJCHGC04363 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04363 protein - Schistosoma
japonicum (Blood fluke)
Length = 103
Score = 64.5 bits (150), Expect = 3e-09
Identities = 27/77 (35%), Positives = 52/77 (67%), Gaps = 5/77 (6%)
Frame = +2
Query: 146 EKNFIQKIVSQGHRLDGRNFNETRKLDISF--GSE---YGCCIVSLGETKILSEVTCEVA 310
E + + +++ G+RLDGR+ NE R++ F G + GCC+V +G T ++++V+ EV
Sbjct: 6 EVDTLTEMLLSGYRLDGRSINEYREISFRFPQGKDPNISGCCVVKIGATTVMAQVSVEVI 65
Query: 311 QPKQIRPNEGIIFINVE 361
+PK RP++G++F++ +
Sbjct: 66 EPKHFRPSQGMLFVHFD 82
>UniRef50_Q4UI91 Cluster: Exosome ribonuclease PH (Rrp42 homologue),
putative; n=2; Theileria|Rep: Exosome ribonuclease PH
(Rrp42 homologue), putative - Theileria annulata
Length = 268
Score = 60.5 bits (140), Expect = 5e-08
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Frame = +2
Query: 152 NFIQKIVSQGHRLDGRNFNETRKLDI--SFGS-EYGCCIVSLGETKILSEVTCEVAQPKQ 322
+F++ +S RLDGR F + L+I + S +G V+ G+ + + V + P+
Sbjct: 2 DFVKSAISSNLRLDGRKFEQLYSLNIIPNISSIAHGSSQVTFGDNIVQTTVNFSIVSPED 61
Query: 323 IRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEK 502
P+EGII + + + + R ++ L +L +DL+SLCI+ +
Sbjct: 62 STPDEGIIDLTITGTNIFENSELSQRNYEI---LCNILYDLEFQHAFLDLKSLCILPGQL 118
Query: 503 VWSLRINIKVLNHDGNLTECASIATLASIAHFXRPD 610
W++RI+ V+ G + + SI L+S+ PD
Sbjct: 119 CWNIRIHSTVVKRGGCVIDALSIGVLSSLMCSDVPD 154
>UniRef50_Q9SSE1 Cluster: MLP3.20 protein; n=5; core
eudicotyledons|Rep: MLP3.20 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 297
Score = 60.1 bits (139), Expect = 7e-08
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCE 304
LS E++FI+ ++Q R DGR R + + G G V +G T +++ V E
Sbjct: 3 LSLGEQHFIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAE 62
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKC------- 463
+ +P ++P++G + + ++ +P A P F +L+ L L++C K
Sbjct: 63 IGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGLQSS 122
Query: 464 ---------IDLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRP 607
I+L SL I + W L I+ V++ DGNL + A A++ + P
Sbjct: 123 IHVLVPGAGINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIP 179
>UniRef50_A7SQ50 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 225
Score = 59.3 bits (137), Expect = 1e-07
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Frame = +2
Query: 302 EVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESL 481
E A+P PN+G I NV+L P+ +P F ++ L ++ I S+
Sbjct: 18 EFAEPAADVPNKGFIVPNVDLPPLCSPSFRPGPPSEHAQVLSTFIDNL------ITKRSM 71
Query: 482 CIVVEEK--VWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTE 655
++ K VW L I++ L++DGN+ + A IA LA++ + T + +
Sbjct: 72 ELLQHAKYLVWVLYIDLMCLDYDGNVADAAVIAMLAALQNTRLHTVTINEETETPEPSEN 131
Query: 656 KDPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINT 796
KD I L PV TF ++ +D + DP EE + + + T
Sbjct: 132 KD-IHLKLKSMPVAVTFGIFDDDHIYCDPTDEEERLASGKVSVVMTT 177
>UniRef50_Q7QP16 Cluster: GLP_83_5565_6509; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_83_5565_6509 - Giardia lamblia ATCC
50803
Length = 314
Score = 56.8 bits (131), Expect = 7e-07
Identities = 40/142 (28%), Positives = 66/142 (46%)
Frame = +2
Query: 185 RLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFINVEL 364
R+DGR ETR + +SF + G +V G+TK+ + + KQ+R G I + L
Sbjct: 16 RIDGRGIGETRDISLSFFTARGSVLVEKGKTKVAASSKLAILSGKQLR--SGRITVTCNL 73
Query: 365 NPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHD 544
P ++T V L LL + + + ++L I+ + +R +++VL D
Sbjct: 74 -PSEL------KETIEHVNLADLLNNTFASDQVVPKDTLVIIPGAMYFVIRCSVEVLQDD 126
Query: 545 GNLTECASIATLASIAHFXRPD 610
G L + IA SI H P+
Sbjct: 127 GGLRDACIIAAGTSIYHMGIPN 148
>UniRef50_A7ARR1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 267
Score = 56.4 bits (130), Expect = 9e-07
Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Frame = +2
Query: 152 NFIQKIVSQGHRLDGRNFNETRKL----DISFGSEYGCCIVSLGETKILSEVTCEVAQPK 319
+FI+ ++ RLDGR ++ K+ ++S G+ +G V L +T +++ + V P
Sbjct: 2 DFIRNALAANCRLDGRRLDDNPKILIEPNVSTGA-HGSAKVILDDTVVITTIMFHVTSPN 60
Query: 320 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEE 499
P EG + I + +P + +++ D + +LE + + + LCI+ +
Sbjct: 61 TNSPEEGNVEITLG-SPFTLEDSDISQKRDER--MAHILEMLQFHKQLFNRKLLCILSGQ 117
Query: 500 KVWSLRINIKVLNHDGNLTECASIATLASI 589
VW++RI+ VL G + + S+A + ++
Sbjct: 118 YVWTMRIHTTVLQRGGGVMDAVSVAVICAM 147
>UniRef50_Q4YPT7 Cluster: Exoribonuclease PH, putative; n=5;
Plasmodium|Rep: Exoribonuclease PH, putative -
Plasmodium berghei
Length = 281
Score = 55.6 bits (128), Expect = 2e-06
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Frame = +2
Query: 155 FIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQI 325
+I++ ++ R+DGR R ++I+ S G V E ++ + + P+Q
Sbjct: 6 YIEEGINSNIRVDGRTLLTYRTIEINKSILVSADGSSSVMNEENNVICGIKLSLLPPEQH 65
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
+EG F+N++++ A+ ++ L + + + C K++ ID + LC++ + V
Sbjct: 66 SIDEG--FVNLQIDCPASVASNRIKKEHLQIMTSIIYDLCIKNN--IDKKKLCVLPSKFV 121
Query: 506 WSLRINIKVLNHDGNLTECASIATLASI 589
W + IN+ VLN G L + SIA ++
Sbjct: 122 WGIDINVMVLNGGGGLLDIISIAIYVAL 149
>UniRef50_Q8MPG3 Cluster: Exosome-associated protein 2; n=3;
Trypanosoma|Rep: Exosome-associated protein 2 -
Trypanosoma brucei
Length = 294
Score = 52.0 bits (119), Expect = 2e-05
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Frame = +2
Query: 158 IQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVS--LGETKILSEVTCEVA----QPK 319
+ + + Q RLDGR + R+ I S+ G +++ L + C V+ P
Sbjct: 19 VHQFLVQNKRLDGRPLDALREPHILRDSKGGDGLLASTLYTDNTGMCLNCTVSGVFGPPP 78
Query: 320 QIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDS--KCIDLESLCIVV 493
+P+EG + ++V AAP F+++ TD +R + + + + C+DL L I+
Sbjct: 79 SDQPDEGRLTVDV-----AAPFFQSH-STDQVAAALREVARFVRSTIISCMDLTELNIIN 132
Query: 494 EEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRP-DFTRDGDRVIIHTLTEKDPIP 670
E W L++ + +LN DG L A A +A+I + P +GD V L
Sbjct: 133 GEACWVLQVELVILNADGGLRAAALHAVVAAIHNMLLPRSRLPNGDEVESRRLR------ 186
Query: 671 TVLYHYPVCTTFALY----SNDILLSDPNFLEESVCTSNTEEGINTAGGLLVF 817
+ PV T +Y S L D N EESV ++ G++ F
Sbjct: 187 --FHTIPVAVTIGVYKLGASGVRFLMDTNAAEESVVDGLLTVVLSDENGIITF 237
>UniRef50_O45424 Cluster: Putative uncharacterized protein exos-7;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein exos-7 - Caenorhabditis elegans
Length = 312
Score = 46.0 bits (104), Expect = 0.001
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETK-ILSEVTC 301
LS+ EK F+ R DGR+ + R++ + G G C V LG+T +L+ +
Sbjct: 5 LSDDEKLFLITGAEANIRNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLAGIKL 64
Query: 302 EVAQ---PKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDL 472
E+ + P + I F NV+ + A+ QF + L + Y SK +D+
Sbjct: 65 ELESYDAETEKEPKQPINF-NVDFSANASSQFAGKGGDEYAEELSAAFQAAY--SKALDI 121
Query: 473 E---SLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPD 610
+ + + W + ++I VL DG++++ SIA + +++ P+
Sbjct: 122 MPNLAKTQLADGYRWKINVDISVLQWDGSVSDAISIAIIGALSDLEFPE 170
>UniRef50_Q01CP9 Cluster: Exosc8 protein; n=2; Ostreococcus|Rep:
Exosc8 protein - Ostreococcus tauri
Length = 294
Score = 42.7 bits (96), Expect = 0.012
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Frame = +2
Query: 467 DLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHT 646
DL LCI W L +++ VL+ DG + A A +A++ P+ T +++I
Sbjct: 129 DLSDLCIERGVFAWRLMLDVVVLDDDGAAADAALSAAVAALRDVVLPEATVKRGKIVIGD 188
Query: 647 LTE---------KDPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESV 763
E + P + PVC T ALY +L+ DP EE++
Sbjct: 189 EEEGVDGADDGMRKGTPLNVRTTPVCLTTALYKEHLLV-DPTHAEEAL 235
>UniRef50_A3FQP8 Cluster: Exoribonuclease PH, putative; n=2;
Cryptosporidium|Rep: Exoribonuclease PH, putative -
Cryptosporidium parvum Iowa II
Length = 295
Score = 40.7 bits (91), Expect = 0.047
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 6/153 (3%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISF---GSEYGCCIVSLGETKILSEVTCE 304
+S+ EK F++ V QG R DGR+ + R + I+ + G + E I+ V
Sbjct: 20 ISDSEKLFLEDGVDQGIRNDGRDLTDFRPIVIALDVISTANGSSRIRNDELDIIVAVKVS 79
Query: 305 VAQPKQIRPNEGIIFINVELNPMA--APQFEANRQTDLTVYLVRLL-EKCYKDSKCIDLE 475
I+F + ++ ++ AP F + D + Y+ ++ + C+K+ DL
Sbjct: 80 FLNNLFFFIIALILFSSNIMDKISNVAPSFT---EEDYSFYITNIVKDMCFKN---FDLS 133
Query: 476 SLCIVVEEKVWSLRINIKVLNHDGNLTECASIA 574
L I+ + W++ I+ +L+ GN+ + +IA
Sbjct: 134 KLTILENKLYWNIYIDATILSFGGNMVDWVTIA 166
>UniRef50_Q54VM4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 324
Score = 39.5 bits (88), Expect = 0.11
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCE 304
+S E FIQ+ V R DGRN + R I G G V L +T++L V E
Sbjct: 4 ISPSESLFIQQGVENNIRSDGRNRVDYRNFAIETGEIIHANGSARVKLSQTEVLVGVKAE 63
Query: 305 VAQ-PKQIRPN-------EGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSK 460
+ +I N + ++F +V P A+P+FE L + L + LE+ Y
Sbjct: 64 ITHIQSEITSNLQQSDTSKRLVF-SVNCCPSASPEFEGKGSEFLNIELSKQLERLYSHPN 122
Query: 461 CI 466
I
Sbjct: 123 VI 124
Score = 36.7 bits (81), Expect = 0.76
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +2
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTR-DGDRVIIHTLTEKD 661
IV + W+L ++ VL+ DGNL + SIA +++ + P G+ I D
Sbjct: 171 IVSGKYYWTLYVDAIVLDSDGNLFDALSIACRSALQNTRIPRVKAIQGEYEEITFEVSDD 230
Query: 662 PIPTV---LYHYPVCTTFALYSNDILLSDPNFLEESVCTSNTEEGINTAGGL 808
P T+ + + P+C T N ++ D EE + G+N+ +
Sbjct: 231 PEDTLSLSIDNVPICVTLTKIGNQFVI-DTTLQEELCMNARLTVGVNSLANI 281
>UniRef50_UPI0000E4A2CF Cluster: PREDICTED: similar to Exosc7
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Exosc7 protein,
partial - Strongylocentrotus purpuratus
Length = 209
Score = 39.1 bits (87), Expect = 0.14
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +2
Query: 452 DSKCIDLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFT----R 619
+++ +D +SLC++ + VW+L +I VL GNL + ++A A++ + P T
Sbjct: 36 NTQMLDYKSLCVIAGQCVWTLYADIVVLECGGNLLDAIALAVKAALYNTRIPLVTVHKDM 95
Query: 620 DGDRVIIHTLTEKDPIPTVLYHYPVCTTFALYSNDILLSDPNFLEESVCT 769
DG I + D + + PV T + + ++ LEE C+
Sbjct: 96 DGTEDIDVSSNPHDFVTLDTKNLPVLVTVTMVGSGHIVDAT--LEEEACS 143
>UniRef50_A6NT19 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 716
Score = 38.7 bits (86), Expect = 0.19
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +2
Query: 89 FTKKYEPSNKMRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCI 259
+ ++Y +K + +K ++ + QGHR+DGR NE R L G +G +
Sbjct: 290 YLEEYPEMDKYLEEFTYKFQKKIVKAWLLQGHRVDGRAKNEIRPLSAEVGVLPKVHGSGL 349
Query: 260 VSLGETKILSEVTCEVAQPKQ 322
+ G+T++LS T Q
Sbjct: 350 FTRGQTQVLSVATLNTLAASQ 370
>UniRef50_Q4Q1B7 Cluster: Exosome complex exonuclease RRP41,
putative; n=7; Trypanosomatidae|Rep: Exosome complex
exonuclease RRP41, putative - Leishmania major
Length = 246
Score = 38.7 bits (86), Expect = 0.19
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 11/148 (7%)
Frame = +2
Query: 179 GHRLDGRNFNETRKLDISFGSEYGC---CIVSLGETKILSEV--TCEVAQPKQIRPNEGI 343
G RLDGR E R++DI+FG+ C C ++LG++K+ + V E ++ + ++G+
Sbjct: 12 GLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESLHKQEAKHDKGL 71
Query: 344 IFINVELNPMAA-----PQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVW 508
+ V + A PQ + D+ +V++ S+ ++ +
Sbjct: 72 VTCEVAVAAFAGENRRNPQRRSKLSEDIGAAVVQV------------ARSVILLSQYPNS 119
Query: 509 SLRINIKVLNHDGN-LTECASIATLASI 589
+ I I+VL DGN C + A LA I
Sbjct: 120 QIHIYIEVLQQDGNEKIACVNAACLALI 147
>UniRef50_A0RXU1 Cluster: RNase PH; n=1; Cenarchaeum symbiosum|Rep:
RNase PH - Cenarchaeum symbiosum
Length = 243
Score = 37.5 bits (83), Expect = 0.44
Identities = 33/143 (23%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Frame = +2
Query: 179 GHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEV--TCEVAQPKQIRPNEGI 343
G R DGR +ETR+++I+ G + G + G+ KIL+ + +V +R GI
Sbjct: 15 GIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPRDVHPKHMVRTETGI 74
Query: 344 IFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRIN 523
+ ++P + + + + + + +++++ LE ++ + ++ +
Sbjct: 75 LRCRYHMSPFSVSERKKPAPSRREIEISKVIKEA--------LEPSLMLEQFPRTAVDVF 126
Query: 524 IKVLNHDGNLTECASIATLASIA 592
I+VL DG + CA++A AS+A
Sbjct: 127 IEVLQADGG-SRCAALAA-ASVA 147
>UniRef50_Q5XQ91 Cluster: Putative uncharacterized protein; n=1;
uncultured archaeon GZfos26D8|Rep: Putative
uncharacterized protein - uncultured archaeon GZfos26D8
Length = 208
Score = 36.3 bits (80), Expect = 1.0
Identities = 36/120 (30%), Positives = 53/120 (44%)
Frame = -2
Query: 606 GLXKCAIEASVAILAHSVKLPSWFRTLILILKDQTFSSTTMQSDSRSMHFESL*HFSSNL 427
G+ + EA A S +LP T I I TFS +++ + SRS+ + S+ L
Sbjct: 56 GMRRFRREAMAPNAAASARLPLSSNTCISIKTIHTFSPSSIHNLSRSIVSDPRMPRSTTL 115
Query: 426 TR*TVRSVCLLASNCGAAIGLSSTLINMMPSFGLICFG*ATSHVTSDRIFVSPKDTIQQP 247
+ S SN G A G SS + + P G+ G +S T + VSP T +P
Sbjct: 116 ASCMLFSFGGPDSNLGDARGTSSAFVIITPLSGVSGKGVPSSTFTPTKTSVSPIFTRAEP 175
>UniRef50_Q7QPU9 Cluster: GLP_16_6871_9435; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_16_6871_9435 - Giardia lamblia ATCC
50803
Length = 854
Score = 35.9 bits (79), Expect = 1.3
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +2
Query: 158 IQKIVSQGHRLDGRNFNETRKLDISFGSEYGCC-IVSLGETKILSEVTCEVAQPKQIRPN 334
I+ + Q HRLD + T L+ E C ++S G + L E + E+ +
Sbjct: 53 IRDLARQAHRLDHESI--TPLLEAFVDDEQECIFLISRGAGQSLYEYSEELCFLQVNLEE 110
Query: 335 EGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
E II I VEL + NR+TD T L L D CI L S
Sbjct: 111 EVIITILVELINAILYVYSTNRKTDFTDALASNLPSTGLDPLCIRLSS 158
>UniRef50_A2FQU8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 262
Score = 35.5 bits (78), Expect = 1.8
Identities = 42/210 (20%), Positives = 92/210 (43%), Gaps = 11/210 (5%)
Frame = +2
Query: 167 IVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCEVAQPKQIRPNE 337
++ + R DGR+FN++R + I+ F ++SLG+T I +++ VA P+ I P+
Sbjct: 14 LLKEHSRNDGRSFNDSRPIRITEKCFKDGQSSSLISLGKTIIATKI---VATPQPIAPSF 70
Query: 338 GIIFINVELNPMAAP-QFEANRQTDLTVYLVRLLEKCYKDSKCIDLES-LCIVVEEKVWS 511
++ ++ ++ + +TV + +LL + D + ++ W+
Sbjct: 71 NVVINRSAVSLVSGKGAVDQTLSAFITVLVNKLLPMSELEIARPDPHNPFHSNIKIWGWN 130
Query: 512 LRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLY--H 685
L+ +++ DG + + + ++ P++ D + ++ T LY +
Sbjct: 131 LKFYQTIISDDGGVEVASVLGIQNTLQTLELPNYNLDDEAKLVDAGTSHKINILSLYAKN 190
Query: 686 YPVCTTFALYSND----ILLSDPNFLEESV 763
+ + T ND I+L DP EE +
Sbjct: 191 FSILTDDCDPDNDDVNKIILVDPTSDEEKI 220
>UniRef50_A5KBP5 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 271
Score = 34.7 bits (76), Expect = 3.1
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 3/139 (2%)
Frame = +2
Query: 185 RLDGRNFNETRKLDISFGSE-YG--CCIVSLGETKILSEVTCEVAQPKQIRPNEGIIFIN 355
R++ R NE R + I GS+ Y C SLG TKIL+ + K ++G +F+
Sbjct: 32 RINNRKNNEIRDMFIKLGSDGYSDASCFYSLGNTKILALIYGPKPDSKNATYDKGKVFL- 90
Query: 356 VELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVL 535
E+ + AN ++D + LL +C +D C S+ I ++
Sbjct: 91 -EIRSLNMNDDGANDESDENI--KNLLIECVSSVILLDQYPQC--------SINIKCLII 139
Query: 536 NHDGNLTECASIATLASIA 592
+DG C S ATL I+
Sbjct: 140 QNDGG---CLS-ATLTCIS 154
>UniRef50_Q24GF7 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: 3' exoribonuclease family, domain 1
containing protein - Tetrahymena thermophila SB210
Length = 270
Score = 34.3 bits (75), Expect = 4.1
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 9/173 (5%)
Frame = +2
Query: 185 RLDGRNFNETRKLDISFGS---EYGCCIVSLGETK--ILSEVTCEVAQPKQIRPNEGIIF 349
R DGR +++R+ I G G +SL + I + + E+ + +EG I
Sbjct: 22 RGDGRKNDQSREYLIQTGQLKQANGSSFISLNDNSVNIYTGIKVEIGETDN---DEGKII 78
Query: 350 INVELNPMAAPQFEA----NRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLR 517
+ +E + N + +YL LL K + C +SLCIV ++K W L
Sbjct: 79 LKIESAQRTEQNRDQENHINSDKNTLIYLEALLNKYLIQNIC--KKSLCIVEKKKCWILN 136
Query: 518 INIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTV 676
I++ +L E A + +A+ + D + + LT +D I +
Sbjct: 137 IDVFILES----VEIAYLNLMAAGINAALEDLVLPKISITHNNLTNEDEITLI 185
>UniRef50_Q92HV7 Cluster: Polyribonucleotide nucleotidyltransferase;
n=20; Proteobacteria|Rep: Polyribonucleotide
nucleotidyltransferase - Rickettsia conorii
Length = 749
Score = 34.3 bits (75), Expect = 4.1
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +2
Query: 86 IFTKKYEPSNKMRDTCLSNCEKNFIQ-KIVSQGHRLDGRNFNETRKLDISFG---SEYGC 253
I KKY SN ++ L E + ++ +I+ + R+DGR+ + R++ G S +G
Sbjct: 284 IENKKY--SNYQIESALKAIESDILRNEILEKNRRIDGRSTTDIRQIACEIGLLPSAHGS 341
Query: 254 CIVSLGETKILSEVTCEVAQPKQI 325
+ + GET+ L T + +QI
Sbjct: 342 ALFTRGETQSLVSTTFGTSLDEQI 365
>UniRef50_Q6F498 Cluster: Putative transcriptional regulator,
similar to LAL subfamily; n=1; Streptomyces griseus|Rep:
Putative transcriptional regulator, similar to LAL
subfamily - Streptomyces griseus
Length = 953
Score = 33.9 bits (74), Expect = 5.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 512 LRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVL 679
L + + L H GN E T+ S+ D +RDG R + + +DP P V+
Sbjct: 183 LCVAVTALVHHGNAPEAEHFITMPSMPAICLDDLSRDGVRDLFSAVFNRDPDPDVV 238
>UniRef50_Q00YJ4 Cluster: Exosomal 3'-5' exoribonuclease complex,
subunit Rrp42; n=2; Ostreococcus|Rep: Exosomal 3'-5'
exoribonuclease complex, subunit Rrp42 - Ostreococcus
tauri
Length = 314
Score = 33.9 bits (74), Expect = 5.4
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 25/166 (15%)
Frame = +2
Query: 170 VSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPKQIRPNE- 337
V+ R DGR R L ++ G + G C V+LGET ++ V C+V + ++
Sbjct: 12 VADDCREDGRGRATRRALRMAIGVVPNANGSCAVTLGETSCVAAVRCDVTAIEAWEASDV 71
Query: 338 GIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYK---------------------D 454
G I + V+ + +A + A R + L R LE D
Sbjct: 72 GAIVLRVDASSIATTR--AGRAAAVGETLRRRLESVVAGRERGVSDASGRASGSGVDAWD 129
Query: 455 SKCIDLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIA 592
IDL SLC+ W+L ++ G++ + S+A ++A
Sbjct: 130 GGGIDLRSLCVRPGRARWTLAVDAVCACDRGSMLDALSVAVRGALA 175
>UniRef50_O96177 Cluster: Putative uncharacterized protein PFB0415c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFB0415c - Plasmodium falciparum
(isolate 3D7)
Length = 256
Score = 33.9 bits (74), Expect = 5.4
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 131 CLSNCEKNFIQKIVSQGH-RLDGRNFNETRKLDISFGSE--YGC-CIVSLGETKILSEVT 298
C S +K + + + + R++ R NE R + I G + +G C SLG TKIL+ V
Sbjct: 13 CKSKFDKIYEENLNNGSFKRINNRKNNEIRDMFIKLGEDENFGSSCFYSLGNTKILTTVY 72
Query: 299 CEVAQPKQIRPNEGIIFINVE 361
K ++G +F++V+
Sbjct: 73 GPNPDSKYATYSKGKVFLDVK 93
>UniRef50_Q2S1P1 Cluster: Polyribonucleotide nucleotidyltransferase;
n=1; Salinibacter ruber DSM 13855|Rep:
Polyribonucleotide nucleotidyltransferase - Salinibacter
ruber (strain DSM 13855)
Length = 722
Score = 33.5 bits (73), Expect = 7.1
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 110 SNKMRDTCLSNCEKNFIQK-IVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGET 277
++ +RD + EK ++ IV +G R+DGR+ + R L + G +G I + GET
Sbjct: 307 ASDIRDA-IGEVEKGEMRNMIVEEGKRIDGRDQTDVRDLWMEVGYLPRVHGSAIFTRGET 365
Query: 278 KILSEVT 298
++L +T
Sbjct: 366 QVLGSIT 372
>UniRef50_A5TWD5 Cluster: Possible replication protein; n=1;
Fusobacterium nucleatum subsp. polymorphum ATCC
10953|Rep: Possible replication protein - Fusobacterium
nucleatum subsp. polymorphum ATCC 10953
Length = 681
Score = 33.5 bits (73), Expect = 7.1
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 218 KLDISFGSEYGC-CIVSLGETKILSEVTCEVAQ-PKQIRPNEGIIFINVELNPMAAPQFE 391
K+D GS+YGC C+ +LGE + + T EVA+ P + N+ + EL + A
Sbjct: 127 KVDYKLGSKYGCACMKALGEVRPVINDTGEVAELPTFLLNNKVLNNTLKELEDIKAS--T 184
Query: 392 ANRQTDLTVYLVRLLEKCYKD 454
R + ++ Y +LL+ Y +
Sbjct: 185 GGRNSFISKYKYQLLKNGYDE 205
>UniRef50_Q9SP08 Cluster: Exonuclease RRP41; n=5; Magnoliophyta|Rep:
Exonuclease RRP41 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 241
Score = 33.5 bits (73), Expect = 7.1
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +2
Query: 176 QGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEV--TCEVAQPKQIRPNE- 337
+G RLDGR FNE R++ G G + +G TK+++ V E+ Q + N+
Sbjct: 7 EGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQQKKNDH 66
Query: 338 GIIFINVELNPMAA----PQFEANRQTDLTVYLVRLLEKC 445
++ + + Q R T+L++ + + +E C
Sbjct: 67 AVVLCEYSMAQFSTGDRRRQKFDRRSTELSLVIRQTMEAC 106
>UniRef50_Q95QG7 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 277
Score = 33.1 bits (72), Expect = 9.4
Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 17/223 (7%)
Frame = +2
Query: 149 KNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQPKQIR 328
+ + + +G DGR + +KL G E G S+ T+ ++ V+C + +
Sbjct: 12 RGYFATFIKEGVYPDGRGLLDEQKLVFKQG-ECGGVGSSVVSTQGVT-VSCSIQASVSLV 69
Query: 329 PNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCY---KDSKCIDLESLCIVVEE 499
+ ++ I +E + + E + + +V L C+ ++ +C+D+ + +E
Sbjct: 70 SDAPLVDIKIEGSQQLS---EKDAEDCNSVLLSLFTNNCFVRRENLRCLDVCGKPLPLE- 125
Query: 500 KVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFT---RDGDRVIIH-TLTEKD-- 661
W L I +KVL+ +GN + A A A++ P +GD I T + D
Sbjct: 126 --WQLHIIVKVLSLEGNFLDAAVCALGAALVDAKLPSIVLNHSEGDESTIEKTQIQADYR 183
Query: 662 PIPTVLYHYP-VCTTFALY-------SNDILLSDPNFLEESVC 766
+ + P +C +F ++ +++LL P SVC
Sbjct: 184 TMHRLTLEEPLMCCSFGIFVDVNSDKKSEVLLLSPTLEAISVC 226
>UniRef50_Q4Q4S6 Cluster: Exosome-associated protein 2, putative;
n=4; Leishmania|Rep: Exosome-associated protein 2,
putative - Leishmania major
Length = 312
Score = 33.1 bits (72), Expect = 9.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 461 CIDLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRP 607
C DL L I E W L++++ +L+ DG L + A LA++ P
Sbjct: 166 CFDLSQLSIYAGEACWVLKVSVLLLSVDGGLRAGSLHAALAALHKLHLP 214
>UniRef50_Q5K9V3 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 416
Score = 33.1 bits (72), Expect = 9.4
Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +2
Query: 440 KCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAH------FX 601
K K+ K + LE WS + + +V H + + + +I H F
Sbjct: 89 KALKNVKVVTLEEFFSAARIAWWSEQWSFQVNPHWRDAVPRSPVRAFPAIEHVHLGENFI 148
Query: 602 RPDFTRDGDRVIIHTLTEKDPIPTVLYHYPV 694
PD T D +I HT T + P P+ P+
Sbjct: 149 NPDITPKWDAIIDHTFTRQLPSPSFCNDVPI 179
>UniRef50_Q6L223 Cluster: Ribonuclease PH; n=2;
Thermoplasmatales|Rep: Ribonuclease PH - Picrophilus
torridus
Length = 239
Score = 33.1 bits (72), Expect = 9.4
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Frame = +2
Query: 158 IQKIVSQGHRLDGRNFNETRKLDISFG---SEYGCCIVSLGETKILSEVTCEVAQPK 319
++ I G RLDGR FNE R + I+ G + G + G KI+ V A PK
Sbjct: 4 VKLINDDGLRLDGRAFNEMRPIRITTGVVDNADGSAYIEWGANKIVVAVYVREAYPK 60
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 826,935,789
Number of Sequences: 1657284
Number of extensions: 16430144
Number of successful extensions: 38632
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 37111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38580
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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