Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F13
         (868 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    27   0.25 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           25   1.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   4.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   7.2  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    22   7.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.5  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.5  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.6 bits (56), Expect = 0.25
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 200 NFNETRKLDISFGSEYGCCIVSLGETKILSEVTCEVAQP 316
           N  + RK  ++ GSEY   IVSLGE K ++   CE  +P
Sbjct: 847 NLYDARKPYVN-GSEYHPSIVSLGEYKCVT-CKCENGKP 883


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 659 DPIPTVLYHYPVCTTFALYSNDILLSDPNFLE 754
           +P P   Y Y +    AL  +D +LSDP+ ++
Sbjct: 144 NPTPPPHYTYQIIPYEALNVDDHILSDPSLMD 175


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = -1

Query: 346 YDAFIWSNLFWLSYF 302
           Y+AF+W+ +  ++Y+
Sbjct: 127 YEAFVWTRIMGVAYY 141


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +3

Query: 96  KNMNQVTKCVILVYRIVKRISYKRSYLKDIV 188
           ++ N  T C  L   +V+++S+   +L+DI+
Sbjct: 123 RDHNLTTLCQELGISVVQKVSHTLYHLQDII 153


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 127 YLFIEL*KEFHTKDRISR 180
           Y  +EL KEFHT   ++R
Sbjct: 233 YQTLELEKEFHTNHYLTR 250


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 127 YLFIEL*KEFHTKDRISR 180
           Y  +EL KEFHT   ++R
Sbjct: 15  YQTLELEKEFHTNHYLTR 32


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 407 DLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
           D+  +L+  L +C+  SKCI + +    +E+KV
Sbjct: 212 DMGEFLLYRLLRCWLISKCIYVFNPRYYLEKKV 244


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 407 DLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
           D+  +L+  L +C+  SKCI + +    +E+KV
Sbjct: 212 DMGEFLLYRLLRCWLISKCIYVFNPRYYLEKKV 244


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,705
Number of Sequences: 336
Number of extensions: 4663
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)