Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_F13
         (868 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   9.1  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   9.1  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = +2

Query: 629  RVIIHTLTEKDPIPTVLYHYPVCTTFALYS-NDILLSD 739
            ++++  L    P P  L+   VC    LY  N +LL+D
Sbjct: 1127 QILVPELCTIHPFPASLWRAAVCLPCVLYRINALLLAD 1164


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 335 EGIIFINVELNPMAAPQF 388
           +G++F+   LNP   PQF
Sbjct: 256 KGVLFVPKNLNPPNCPQF 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 892,426
Number of Sequences: 2352
Number of extensions: 18583
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)