Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_F13
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC142978-1|AAI42979.1| 439|Homo sapiens exosome component 9 pro... 248 2e-65
AJ517294-1|CAD56889.1| 456|Homo sapiens polymyositis/scleroderm... 248 2e-65
AJ505989-1|CAD44530.1| 439|Homo sapiens polymyositis/scleroderm... 248 2e-65
U09215-1|AAA18832.1| 372|Homo sapiens PM-Scl-75 autoantigen pro... 153 6e-37
M58460-1|AAA58384.1| 355|Homo sapiens autoantigen protein. 153 6e-37
AC079341-2|AAY40968.1| 355|Homo sapiens unknown protein. 153 6e-37
BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8 pro... 97 7e-20
AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein. 97 7e-20
AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein... 97 7e-20
BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7 pro... 87 6e-17
D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein. 86 1e-16
>BC142978-1|AAI42979.1| 439|Homo sapiens exosome component 9
protein.
Length = 439
Score = 248 bits (608), Expect = 2e-65
Identities = 108/216 (50%), Positives = 154/216 (71%), Gaps = 1/216 (0%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 298
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HF RPD + GD V ++T E+
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEER 180
Query: 659 DPIPTVLYHYPVCTTFALYSND-ILLSDPNFLEESV 763
DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 181 DPVPLSIHHMPICVSFAFFQQGAYLLVDPNEREERV 216
>AJ517294-1|CAD56889.1| 456|Homo sapiens polymyositis/scleroderma
autoantigen 1 protein.
Length = 456
Score = 248 bits (608), Expect = 2e-65
Identities = 108/216 (50%), Positives = 154/216 (71%), Gaps = 1/216 (0%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 298
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HF RPD + GD V ++T E+
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEER 180
Query: 659 DPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESV 763
DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 181 DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV 216
>AJ505989-1|CAD44530.1| 439|Homo sapiens polymyositis/scleroderma
autoantigen 1 protein.
Length = 439
Score = 248 bits (608), Expect = 2e-65
Identities = 108/216 (50%), Positives = 154/216 (71%), Gaps = 1/216 (0%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDISFGSEYGCCIVSLGETKILSEVT 298
M++T LSNCE+ F+ + + + RLDGR + R + ISFG++YGCCIV LG+T++L +V+
Sbjct: 1 MKETPLSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGTDYGCCIVELGKTRVLGQVS 60
Query: 299 CEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLES 478
CE+ PK R EGI+F N+EL+ MAAP FE RQ+DL V L RL+E+C ++SKCID ES
Sbjct: 61 CELVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTES 120
Query: 479 LCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEK 658
LC+V EKVW +R+++ +LNHDGN+ + ASIA + ++ HF RPD + GD V ++T E+
Sbjct: 121 LCVVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEER 180
Query: 659 DPIPTVLYHYPVCTTFALY-SNDILLSDPNFLEESV 763
DP+P ++H P+C +FA + LL DPN EE V
Sbjct: 181 DPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV 216
>U09215-1|AAA18832.1| 372|Homo sapiens PM-Scl-75 autoantigen
protein.
Length = 372
Score = 153 bits (372), Expect = 6e-37
Identities = 67/132 (50%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Frame = +2
Query: 371 MAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGN 550
MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+V EKVW +R+++ +LNHDGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 551 LTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDI 727
+ + ASIA + ++ HF RPD + GD V ++T E+DP+P ++H P+C +FA +
Sbjct: 61 IIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTY 120
Query: 728 LLSDPNFLEESV 763
LL DPN EE V
Sbjct: 121 LLVDPNEREERV 132
>M58460-1|AAA58384.1| 355|Homo sapiens autoantigen protein.
Length = 355
Score = 153 bits (372), Expect = 6e-37
Identities = 67/132 (50%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Frame = +2
Query: 371 MAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGN 550
MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+V EKVW +R+++ +LNHDGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 551 LTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDI 727
+ + ASIA + ++ HF RPD + GD V ++T E+DP+P ++H P+C +FA +
Sbjct: 61 IIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTY 120
Query: 728 LLSDPNFLEESV 763
LL DPN EE V
Sbjct: 121 LLVDPNEREERV 132
>AC079341-2|AAY40968.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 153 bits (372), Expect = 6e-37
Identities = 67/132 (50%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Frame = +2
Query: 371 MAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKVWSLRINIKVLNHDGN 550
MAAP FE RQ+DL V L RL+E+C ++SKCID ESLC+V EKVW +R+++ +LNHDGN
Sbjct: 1 MAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLCVVAGEKVWQIRVDLHLLNHDGN 60
Query: 551 LTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYHYPVCTTFALY-SNDI 727
+ + ASIA + ++ HF RPD + GD V ++T E+DP+P ++H P+C +FA +
Sbjct: 61 IIDAASIAAIVALCHFRRPDVSVQGDEVTLYTPEERDPVPLSIHHMPICVSFAFFQQGTY 120
Query: 728 LLSDPNFLEESV 763
LL DPN EE V
Sbjct: 121 LLVDPNEREERV 132
>BC020773-1|AAH20773.1| 276|Homo sapiens exosome component 8
protein.
Length = 276
Score = 97.1 bits (231), Expect = 7e-20
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Frame = +2
Query: 155 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 325
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 13 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 72
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 73 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 132
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYH 685
W L ++ L++DGN+ + + A LA++ + P+ T + + + +K + H
Sbjct: 133 WVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNIRTH 192
Query: 686 YPVCTTFALYSNDILLSDPNFLEESVCT 769
PV T+FA++ + +L+ DP EE + T
Sbjct: 193 -PVATSFAVFDDTLLIVDPTGEEEHLAT 219
>AL138706-8|CAI14013.1| 275|Homo sapiens RP11-421P11.3 protein.
Length = 275
Score = 97.1 bits (231), Expect = 7e-20
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Frame = +2
Query: 155 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 325
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 13 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 72
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 73 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 132
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYH 685
W L ++ L++DGN+ + + A LA++ + P+ T + + + +K + H
Sbjct: 133 WVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNIRTH 192
Query: 686 YPVCTTFALYSNDILLSDPNFLEESVCT 769
PV T+FA++ + +L+ DP EE + T
Sbjct: 193 -PVATSFAVFDDTLLIVDPTGEEEHLAT 219
>AF025438-1|AAC39558.1| 265|Homo sapiens Opa-interacting protein
OIP2 protein.
Length = 265
Score = 97.1 bits (231), Expect = 7e-20
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 3/208 (1%)
Frame = +2
Query: 155 FIQKIVSQGHRLDGRNFNETRKLDISFGS---EYGCCIVSLGETKILSEVTCEVAQPKQI 325
+ ++ + + R DGR E R ++ GS G +V LG T ++ V E A P
Sbjct: 11 YYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTD 70
Query: 326 RPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLCIVVEEKV 505
P++G + NV+L P+ + +F + + + + ++S+ I E LCI + V
Sbjct: 71 APDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISPGKLV 130
Query: 506 WSLRINIKVLNHDGNLTECASIATLASIAHFXRPDFTRDGDRVIIHTLTEKDPIPTVLYH 685
W L ++ L++DGN+ + + A LA++ + P+ T + + + +K + H
Sbjct: 131 WVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSYLNIRTH 190
Query: 686 YPVCTTFALYSNDILLSDPNFLEESVCT 769
PV T+FA++ + +L+ DP EE + T
Sbjct: 191 -PVATSFAVFDDTLLIVDPTGEEEHLAT 217
>BC012831-1|AAH12831.1| 291|Homo sapiens exosome component 7
protein.
Length = 291
Score = 87.4 bits (207), Expect = 6e-17
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 3/160 (1%)
Frame = +2
Query: 119 MRDTCLSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILS 289
M LS EK +I V + R+DGR + R +++ + G V LG T IL
Sbjct: 1 MASVTLSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV 60
Query: 290 EVTCEVAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCID 469
V E+ PK +PNEG + V+ + A P+FE DL + L + + + +D
Sbjct: 61 GVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD 120
Query: 470 LESLCIVVEEKVWSLRINIKVLNHDGNLTECASIATLASI 589
L++LCI E W L +++ +L GNL + SIA A++
Sbjct: 121 LKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAAL 160
>D29958-1|BAA06226.1| 290|Homo sapiens KIAA0116 protein.
Length = 290
Score = 86.2 bits (204), Expect = 1e-16
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Frame = +2
Query: 134 LSNCEKNFIQKIVSQGHRLDGRNFNETRKLDIS---FGSEYGCCIVSLGETKILSEVTCE 304
LS EK +I V + R+DGR + R +++ + G V LG T IL V E
Sbjct: 5 LSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAE 64
Query: 305 VAQPKQIRPNEGIIFINVELNPMAAPQFEANRQTDLTVYLVRLLEKCYKDSKCIDLESLC 484
+ PK +PNEG + V+ + A P+FE DL + L + + + +DL++LC
Sbjct: 65 MGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVDLKTLC 124
Query: 485 IVVEEKVWSLRINIKVLNHDGNLTECASIATLASI 589
I E W L +++ +L GNL + SIA A++
Sbjct: 125 ISPREHCWVLYVDVLLLECGGNLFDAISIAVKAAL 159
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,403,291
Number of Sequences: 237096
Number of extensions: 2572926
Number of successful extensions: 4710
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4707
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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